RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 FAM231BA6NCW3 169 aa14.25□□□□□ -0.13
MAP1LC3A-204ENST00000476428 M0QY20 66 aa14.25□□□□□ -0.13
MAP1LC3A-204ENST00000476428 SUMO4Q6EEV6 95 aa14.25□□□□□ -0.13
MAP1LC3A-204ENST00000476428 TRAV9-2A0A087WT02 112 aa14.24□□□□□ -0.13
MAP1LC3A-204ENST00000476428 HIGD1CA8MV81 97 aa14.24□□□□□ -0.13
MAP1LC3A-204ENST00000476428 RYR1P21817 5038 aa14.24□□□□□ -0.13
MAP1LC3A-204ENST00000476428 A0A087WWC5 75 aa14.23□□□□□ -0.13
MAP1LC3A-204ENST00000476428 BTF3P20290 206 aaKnown RBP14.23□□□□□ -0.13
MAP1LC3A-204ENST00000476428 LINC01556Q5JQF7 62 aa14.22□□□□□ -0.13
MAP1LC3A-204ENST00000476428 A0A1B0GUT8 65 aa14.21□□□□□ -0.13
MAP1LC3A-204ENST00000476428 H7C1H1 209 aa14.21□□□□□ -0.13
MAP1LC3A-204ENST00000476428 K7EP13 123 aa14.21□□□□□ -0.13
MAP1LC3A-204ENST00000476428 SMIM15Q7Z3B0 74 aa14.21□□□□□ -0.13
MAP1LC3A-204ENST00000476428 BORCS7Q96B45 105 aa14.21□□□□□ -0.13
MAP1LC3A-204ENST00000476428 TNFRSF18Q9Y5U5 241 aa14.21□□□□□ -0.13
MAP1LC3A-204ENST00000476428 RASL11AQ6T310 242 aa14.2□□□□□ -0.14
MAP1LC3A-204ENST00000476428 NUP35Q8NFH5 326 aa14.2□□□□□ -0.14
MAP1LC3A-204ENST00000476428 DNAJC30Q96LL9 226 aa14.2□□□□□ -0.14
MAP1LC3A-204ENST00000476428 FAT2Q9NYQ8 4349 aa14.2□□□□□ -0.14
MAP1LC3A-204ENST00000476428 A0A1B0GVY2 172 aa14.19□□□□□ -0.14
MAP1LC3A-204ENST00000476428 IGHV3-30P01768 117 aa14.19□□□□□ -0.14
MAP1LC3A-204ENST00000476428 IGHV3-33P01772 117 aa14.19□□□□□ -0.14
MAP1LC3A-204ENST00000476428 IGHV3-30-3P0DP02 117 aa14.19□□□□□ -0.14
MAP1LC3A-204ENST00000476428 IGHV3-30-5P0DP03 117 aa14.19□□□□□ -0.14
MAP1LC3A-204ENST00000476428 TNP2Q05952 138 aa14.19□□□□□ -0.14
MAP1LC3A-204ENST00000476428 SMIM27A0A1W2PRY6 76 aa14.18□□□□□ -0.14
MAP1LC3A-204ENST00000476428 Q8N3U1 123 aa14.18□□□□□ -0.14
MAP1LC3A-204ENST00000476428 C10orf126Q8N4M7 172 aa14.18□□□□□ -0.14
MAP1LC3A-204ENST00000476428 NAT8BQ9UHF3 227 aa14.18□□□□□ -0.14
MAP1LC3A-204ENST00000476428 DAZ4Q86SG3 579 aaKnown RBP14.17□□□□□ -0.14
MAP1LC3A-204ENST00000476428 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.17□□□□□ -0.14
MAP1LC3A-204ENST00000476428 GATD1Q8NB37 220 aa14.17□□□□□ -0.14
MAP1LC3A-204ENST00000476428 NIT2Q9NQR4 276 aa14.17□□□□□ -0.14
MAP1LC3A-204ENST00000476428 DAZ3Q9NR90 486 aaKnown RBP14.17□□□□□ -0.14
MAP1LC3A-204ENST00000476428 KIAA1109Q2LD37 5005 aa14.17□□□□□ -0.14
MAP1LC3A-204ENST00000476428 TRBV6-8A0A0A6YYG3 113 aa14.16□□□□□ -0.14
MAP1LC3A-204ENST00000476428 TRAV26-2A0A0B4J265 109 aa14.16□□□□□ -0.14
MAP1LC3A-204ENST00000476428 RIGQ13278 110 aa14.16□□□□□ -0.14
MAP1LC3A-204ENST00000476428 UQCC3Q6UW78 93 aa14.16□□□□□ -0.14
MAP1LC3A-204ENST00000476428 Q6ZRN7 208 aaPredicted RBP14.16□□□□□ -0.14
MAP1LC3A-204ENST00000476428 IBA57-AS1B1ANH7 110 aa14.15□□□□□ -0.14
MAP1LC3A-204ENST00000476428 NIT1Q86X76 327 aa14.15□□□□□ -0.14
MAP1LC3A-204ENST00000476428 TMEM191AQ9H0A3 160 aa14.15□□□□□ -0.14
MAP1LC3A-204ENST00000476428 HECTD4Q9Y4D8 3996 aa14.15□□□□□ -0.15
MAP1LC3A-204ENST00000476428 PNRC1Q12796 327 aaPredicted RBP14.14□□□□□ -0.15
MAP1LC3A-204ENST00000476428 NTM-AS1Q6ZSK4 140 aa14.14□□□□□ -0.15
MAP1LC3A-204ENST00000476428 NFE4Q86UQ8 179 aa14.14□□□□□ -0.15
MAP1LC3A-204ENST00000476428 TMEM97Q5BJF2 176 aa14.13□□□□□ -0.15
MAP1LC3A-204ENST00000476428 TMEM218A2RU14 115 aa14.12□□□□□ -0.15
MAP1LC3A-204ENST00000476428 FRZBQ92765 325 aa14.12□□□□□ -0.15
MAP1LC3A-204ENST00000476428 RNF185Q96GF1 192 aa14.12□□□□□ -0.15
MAP1LC3A-204ENST00000476428 PPP1R2P9O14990 202 aa14.11□□□□□ -0.15
MAP1LC3A-204ENST00000476428 COMMD7Q86VX2 200 aa14.11□□□□□ -0.15
MAP1LC3A-204ENST00000476428 RPL39LQ96EH5 51 aaKnown RBP14.11□□□□□ -0.15
MAP1LC3A-204ENST00000476428 ADCYAP1P18509 176 aa14.1□□□□□ -0.15
MAP1LC3A-204ENST00000476428 RAB4AP20338 218 aa14.1□□□□□ -0.15
MAP1LC3A-204ENST00000476428 AMN1Q8IY45 258 aa14.1□□□□□ -0.15
MAP1LC3A-204ENST00000476428 URGCP-MRPS24S4R325 110 aa14.1□□□□□ -0.15
MAP1LC3A-204ENST00000476428 LINC00862A6NCI5 91 aa14.09□□□□□ -0.15
MAP1LC3A-204ENST00000476428 TMEM262E9PQX1 116 aa14.09□□□□□ -0.15
MAP1LC3A-204ENST00000476428 GAS8-AS1O95177 125 aa14.09□□□□□ -0.15
MAP1LC3A-204ENST00000476428 CHCHD5Q9BSY4 110 aa14.09□□□□□ -0.15
MAP1LC3A-204ENST00000476428 A0A087WX48 190 aa14.08□□□□□ -0.16
MAP1LC3A-204ENST00000476428 F8W036 122 aa14.08□□□□□ -0.16
MAP1LC3A-204ENST00000476428 MT-ND4LP03901 98 aa14.08□□□□□ -0.16
MAP1LC3A-204ENST00000476428 CAMPP49913 170 aa14.08□□□□□ -0.16
MAP1LC3A-204ENST00000476428 KCNIP4Q6PIL6 250 aa14.08□□□□□ -0.16
MAP1LC3A-204ENST00000476428 DEFB104AQ8WTQ1 72 aa14.08□□□□□ -0.16
MAP1LC3A-204ENST00000476428 ANAPC16Q96DE5 110 aa14.08□□□□□ -0.16
MAP1LC3A-204ENST00000476428 CHCHD7Q9BUK0 85 aa14.08□□□□□ -0.16
MAP1LC3A-204ENST00000476428 Q9HAA7 133 aa14.08□□□□□ -0.16
MAP1LC3A-204ENST00000476428 TRBV25-1A0A075B6N4 114 aa14.07□□□□□ -0.16
MAP1LC3A-204ENST00000476428 LAGE3Q14657 143 aa14.07□□□□□ -0.16
MAP1LC3A-204ENST00000476428 IQCJQ1A5X6 159 aa14.07□□□□□ -0.16
MAP1LC3A-204ENST00000476428 MRPL54Q6P161 138 aaKnown RBP14.07□□□□□ -0.16
MAP1LC3A-204ENST00000476428 IGHV1-24A0A0C4DH33 117 aa14.06□□□□□ -0.16
MAP1LC3A-204ENST00000476428 A0A1B0GW15 77 aa14.06□□□□□ -0.16
MAP1LC3A-204ENST00000476428 MRAP2Q96G30 205 aa14.06□□□□□ -0.16
MAP1LC3A-204ENST00000476428 KLK12Q9UKR0 248 aa14.06□□□□□ -0.16
MAP1LC3A-204ENST00000476428 TRBV6-5A0A0K0K1A5 114 aa14.05□□□□□ -0.16
MAP1LC3A-204ENST00000476428 GAGE6Q13070 117 aa14.05□□□□□ -0.16
MAP1LC3A-204ENST00000476428 FAM104BQ5XKR9 115 aa14.05□□□□□ -0.16
MAP1LC3A-204ENST00000476428 A0A1B0GXF2 115 aa14.04□□□□□ -0.16
MAP1LC3A-204ENST00000476428 SDHAF1A6NFY7 115 aa14.04□□□□□ -0.16
MAP1LC3A-204ENST00000476428 RPS10P46783 165 aaKnown RBP14.04□□□□□ -0.16
MAP1LC3A-204ENST00000476428 COTL1Q14019 142 aa14.04□□□□□ -0.16
MAP1LC3A-204ENST00000476428 ELOBQ15370 118 aa14.04□□□□□ -0.16
MAP1LC3A-204ENST00000476428 MPV17L2Q567V2 206 aa14.04□□□□□ -0.16
MAP1LC3A-204ENST00000476428 ATRAIDQ6UW56 229 aa14.04□□□□□ -0.16
MAP1LC3A-204ENST00000476428 SEC11CQ9BY50 192 aa14.04□□□□□ -0.16
MAP1LC3A-204ENST00000476428 PKD1P98161 4303 aa14.04□□□□□ -0.16
MAP1LC3A-204ENST00000476428 DNAH11Q96DT5 4516 aa14.03□□□□□ -0.16
MAP1LC3A-204ENST00000476428 TRAV8-3A0A0A6YYJ7 113 aa14.03□□□□□ -0.16
MAP1LC3A-204ENST00000476428 SMKR1H3BMG3 65 aa14.03□□□□□ -0.16
MAP1LC3A-204ENST00000476428 PKIAP61925 76 aa14.03□□□□□ -0.16
MAP1LC3A-204ENST00000476428 HBBP68871 147 aa14.03□□□□□ -0.16
MAP1LC3A-204ENST00000476428 MRPL51Q4U2R6 128 aaKnown RBP14.03□□□□□ -0.16
MAP1LC3A-204ENST00000476428 TMEM243Q9BU79 118 aa14.03□□□□□ -0.16
MAP1LC3A-204ENST00000476428 NCR2O95944 276 aa14.02□□□□□ -0.17
MAP1LC3A-204ENST00000476428 S100A8P05109 93 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms