RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 FANCD2OSQ96PS1 177 aa8.41□□□□□ -1.06
VAPB-204ENST00000475243 ANKHD1Q8IWZ3 2542 aaKnown RBP8.41□□□□□ -1.06
VAPB-204ENST00000475243 SMAD5-AS1Q9Y6J3 95 aa8.41□□□□□ -1.06
VAPB-204ENST00000475243 NDUFA1O15239 70 aa8.41□□□□□ -1.06
VAPB-204ENST00000475243 P0DMU3 169 aa8.41□□□□□ -1.06
VAPB-204ENST00000475243 FAM231AP0DMU4 169 aa8.41□□□□□ -1.06
VAPB-204ENST00000475243 FAM231CP0DMU5 169 aa8.41□□□□□ -1.06
VAPB-204ENST00000475243 C14orf132Q9NPU4 83 aa8.41□□□□□ -1.06
VAPB-204ENST00000475243 PLA2G2EQ9NZK7 142 aa8.41□□□□□ -1.06
VAPB-204ENST00000475243 HIST2H2BDQ6DRA6 164 aa8.4□□□□□ -1.06
VAPB-204ENST00000475243 NREPQ16612 68 aa8.4□□□□□ -1.06
VAPB-204ENST00000475243 CEMP1Q6PRD7 247 aaPredicted RBP8.4□□□□□ -1.07
VAPB-204ENST00000475243 ABCA2Q9BZC7 2435 aa8.4□□□□□ -1.07
VAPB-204ENST00000475243 IGLV2-14P01704 120 aa8.4□□□□□ -1.07
VAPB-204ENST00000475243 SPAG11BQ08648 103 aa8.4□□□□□ -1.07
VAPB-204ENST00000475243 GPHB5Q86YW7 130 aa8.39□□□□□ -1.07
VAPB-204ENST00000475243 TMEM61Q8N0U2 210 aa8.39□□□□□ -1.07
VAPB-204ENST00000475243 WFDC9Q8NEX5 89 aa8.39□□□□□ -1.07
VAPB-204ENST00000475243 RNF138Q8WVD3 245 aa8.39□□□□□ -1.07
VAPB-204ENST00000475243 CLEC2BQ92478 149 aa8.39□□□□□ -1.07
VAPB-204ENST00000475243 SPATA25Q9BR10 227 aa8.39□□□□□ -1.07
VAPB-204ENST00000475243 DNAJC9-AS1A6NH13 148 aa8.39□□□□□ -1.07
VAPB-204ENST00000475243 NDUFB1O75438 58 aa8.39□□□□□ -1.07
VAPB-204ENST00000475243 B5MCH6 92 aa8.39□□□□□ -1.07
VAPB-204ENST00000475243 FXYD2P54710 66 aa8.39□□□□□ -1.07
VAPB-204ENST00000475243 PRRC2AP48634 2157 aaKnown RBP8.39□□□□□ -1.07
VAPB-204ENST00000475243 MSMPQ1L6U9 139 aa8.38□□□□□ -1.07
VAPB-204ENST00000475243 FRMD6-AS1P0C7T7 363 aa8.38□□□□□ -1.07
VAPB-204ENST00000475243 PLA2G5P39877 138 aa8.38□□□□□ -1.07
VAPB-204ENST00000475243 MIR7-3HGQ8N6C7 128 aa8.38□□□□□ -1.07
VAPB-204ENST00000475243 TOMM6Q96B49 74 aa8.38□□□□□ -1.07
VAPB-204ENST00000475243 PKIGQ9Y2B9 76 aa8.38□□□□□ -1.07
VAPB-204ENST00000475243 LINC01548A6NM66 108 aa8.38□□□□□ -1.07
VAPB-204ENST00000475243 COL4A3Q01955 1670 aa8.38□□□□□ -1.07
VAPB-204ENST00000475243 IGKV2-24A0A0C4DH68 120 aa8.38□□□□□ -1.07
VAPB-204ENST00000475243 HIGD2BQ4VC39 106 aa8.38□□□□□ -1.07
VAPB-204ENST00000475243 TP53TG3Q9ULZ0 132 aa8.38□□□□□ -1.07
VAPB-204ENST00000475243 KLK5Q9Y337 293 aaPredicted RBP8.38□□□□□ -1.07
VAPB-204ENST00000475243 RAI1Q7Z5J4 1906 aaPredicted RBP8.38□□□□□ -1.07
VAPB-204ENST00000475243 NAV3Q8IVL0 2385 aa8.38□□□□□ -1.07
VAPB-204ENST00000475243 LECT2O14960 151 aa8.38□□□□□ -1.07
VAPB-204ENST00000475243 IGF2-ASQ6U949 168 aa8.38□□□□□ -1.07
VAPB-204ENST00000475243 IGLV1-47P01700 117 aa8.37□□□□□ -1.07
VAPB-204ENST00000475243 WFDC2Q14508 124 aa8.37□□□□□ -1.07
VAPB-204ENST00000475243 SIRPDQ9H106 197 aa8.37□□□□□ -1.07
VAPB-204ENST00000475243 K7EMT4 169 aa8.37□□□□□ -1.07
VAPB-204ENST00000475243 H0YGX0 51 aa8.37□□□□□ -1.07
VAPB-204ENST00000475243 MYCNOSP40205 109 aa8.37□□□□□ -1.07
VAPB-204ENST00000475243 LINC01545Q5VT33 79 aa8.37□□□□□ -1.07
VAPB-204ENST00000475243 Q8NA96 180 aa8.37□□□□□ -1.07
VAPB-204ENST00000475243 TMEM258P61165 79 aa8.37□□□□□ -1.07
VAPB-204ENST00000475243 TMEM263Q8WUH6 116 aaKnown RBP8.37□□□□□ -1.07
VAPB-204ENST00000475243 ATG2AQ2TAZ0 1938 aa8.37□□□□□ -1.07
VAPB-204ENST00000475243 LGALS9O00182 355 aa8.37□□□□□ -1.07
VAPB-204ENST00000475243 DAZAP2Q15038 168 aaPredicted RBP8.37□□□□□ -1.07
VAPB-204ENST00000475243 DOPEY1Q5JWR5 2465 aa8.36□□□□□ -1.07
VAPB-204ENST00000475243 A0A1B0GX51 115 aa8.36□□□□□ -1.07
VAPB-204ENST00000475243 H0Y9J4 135 aa8.36□□□□□ -1.07
VAPB-204ENST00000475243 SS18L2Q9UHA2 77 aa8.36□□□□□ -1.07
VAPB-204ENST00000475243 TRAV26-1A0A087WT03 109 aa8.36□□□□□ -1.07
VAPB-204ENST00000475243 C11orf86A6NJI1 115 aa8.36□□□□□ -1.07
VAPB-204ENST00000475243 RNF183Q96D59 192 aa8.36□□□□□ -1.07
VAPB-204ENST00000475243 LRCOL1A6NCL2 159 aa8.36□□□□□ -1.07
VAPB-204ENST00000475243 MAP6D1Q9H9H5 199 aa8.36□□□□□ -1.07
VAPB-204ENST00000475243 A0A0B4J2C4 111 aa8.35□□□□□ -1.07
VAPB-204ENST00000475243 Q6ZUT4 128 aa8.35□□□□□ -1.07
VAPB-204ENST00000475243 C11orf45Q8TAV5 145 aa8.35□□□□□ -1.07
VAPB-204ENST00000475243 DIRC1Q969H9 104 aa8.35□□□□□ -1.07
VAPB-204ENST00000475243 IGKV2D-26A0A0A0MRZ7 120 aa8.35□□□□□ -1.07
VAPB-204ENST00000475243 PSMB8P28062 276 aa8.35□□□□□ -1.07
VAPB-204ENST00000475243 PIEZO2Q9H5I5 2752 aa8.35□□□□□ -1.07
VAPB-204ENST00000475243 LINC00269Q8N2A0 174 aa8.34□□□□□ -1.07
VAPB-204ENST00000475243 C19orf84I3L1E1 186 aa8.34□□□□□ -1.07
VAPB-204ENST00000475243 LTBP2Q14767 1821 aa8.34□□□□□ -1.07
VAPB-204ENST00000475243 A0A096LNI7 61 aa8.34□□□□□ -1.07
VAPB-204ENST00000475243 A0A0J9YX75 114 aa8.34□□□□□ -1.07
VAPB-204ENST00000475243 FAM236AA0A1B0GUQ0 79 aa8.34□□□□□ -1.07
VAPB-204ENST00000475243 FAM236BA0A1B0GV22 79 aa8.34□□□□□ -1.07
VAPB-204ENST00000475243 PRO0255Q9UI72 69 aa8.34□□□□□ -1.07
VAPB-204ENST00000475243 CCDC168Q8NDH2 2452 aa8.34□□□□□ -1.08
VAPB-204ENST00000475243 E9PLD3 99 aa8.33□□□□□ -1.08
VAPB-204ENST00000475243 A6NDX4 124 aa8.33□□□□□ -1.08
VAPB-204ENST00000475243 ACYP1P07311 99 aa8.33□□□□□ -1.08
VAPB-204ENST00000475243 MP68P56378 58 aa8.33□□□□□ -1.08
VAPB-204ENST00000475243 KIR2DL5BA0A0G2JN68 375 aa8.33□□□□□ -1.08
VAPB-204ENST00000475243 KIR2DL5BA0A0G2JPC4 375 aa8.33□□□□□ -1.08
VAPB-204ENST00000475243 CTRLP40313 264 aa8.33□□□□□ -1.08
VAPB-204ENST00000475243 KIR2DL5AQ8N109 375 aa8.33□□□□□ -1.08
VAPB-204ENST00000475243 FAM110AQ9BQ89 295 aa8.33□□□□□ -1.08
VAPB-204ENST00000475243 SPANXDQ9BXN6 97 aa8.33□□□□□ -1.08
VAPB-204ENST00000475243 GOLGB1Q14789 3259 aaKnown RBP8.33□□□□□ -1.08
VAPB-204ENST00000475243 INAFM1C9JVW0 142 aa8.32□□□□□ -1.08
VAPB-204ENST00000475243 TRBV6-1A0A0K0K1D8 114 aa8.32□□□□□ -1.08
VAPB-204ENST00000475243 ODF1Q14990 250 aa8.32□□□□□ -1.08
VAPB-204ENST00000475243 LINC01620Q4KN68 170 aa8.32□□□□□ -1.08
VAPB-204ENST00000475243 Q6ZTI0 123 aa8.32□□□□□ -1.08
VAPB-204ENST00000475243 IGHV1-58A0A0C4DH39 117 aa8.32□□□□□ -1.08
VAPB-204ENST00000475243 Q6ZSR3 168 aa8.32□□□□□ -1.08
VAPB-204ENST00000475243 ZNF80P51504 273 aaPredicted RBP8.32□□□□□ -1.08
VAPB-204ENST00000475243 NFE4Q86UQ8 179 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms