RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.06■□□□□ 0.16
TMEM54-205ENST00000475208 DAZAP1Q96EP5 407 aaKnown RBP16.05■□□□□ 0.16
TMEM54-205ENST00000475208 ZNF471Q9BX82 626 aaPredicted RBP16.05■□□□□ 0.16
TMEM54-205ENST00000475208 HMSDA8MTL9 139 aa16.04■□□□□ 0.16
TMEM54-205ENST00000475208 DGAT2L7PQ6IED9 249 aa16.04■□□□□ 0.16
TMEM54-205ENST00000475208 CLPSL2Q6UWE3 100 aa16.04■□□□□ 0.16
TMEM54-205ENST00000475208 C9orf163Q8N9P6 203 aa16.04■□□□□ 0.16
TMEM54-205ENST00000475208 CXCL1P09341 107 aa16.03■□□□□ 0.16
TMEM54-205ENST00000475208 NTM-AS1Q6ZSK4 140 aa16.03■□□□□ 0.16
TMEM54-205ENST00000475208 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.03■□□□□ 0.16
TMEM54-205ENST00000475208 MUC21A0A0G2JKD1 596 aa16.02■□□□□ 0.16
TMEM54-205ENST00000475208 MUC21A0A140T8X8 626 aa16.02■□□□□ 0.16
TMEM54-205ENST00000475208 PRR34Q9NV39 138 aa16.02■□□□□ 0.16
TMEM54-205ENST00000475208 F5H697 171 aa16.01■□□□□ 0.15
TMEM54-205ENST00000475208 SNAI2O43623 268 aa16.01■□□□□ 0.15
TMEM54-205ENST00000475208 PAGE4O60829 102 aa16.01■□□□□ 0.15
TMEM54-205ENST00000475208 RBX1P62877 108 aa16.01■□□□□ 0.15
TMEM54-205ENST00000475208 TMEM97Q5BJF2 176 aa16.01■□□□□ 0.15
TMEM54-205ENST00000475208 SPANXN1Q5VSR9 72 aa16.01■□□□□ 0.15
TMEM54-205ENST00000475208 A0A0D9SG52 128 aa16■□□□□ 0.15
TMEM54-205ENST00000475208 GAGE6Q13070 117 aa16■□□□□ 0.15
TMEM54-205ENST00000475208 KRTAP26-1Q6PEX3 210 aa16■□□□□ 0.15
TMEM54-205ENST00000475208 LINC00269Q8N2A0 174 aa16■□□□□ 0.15
TMEM54-205ENST00000475208 SSBP4Q9BWG4 385 aaPredicted RBP16■□□□□ 0.15
TMEM54-205ENST00000475208 VAX2Q9UIW0 290 aa16■□□□□ 0.15
TMEM54-205ENST00000475208 PANO1I0J062 215 aa15.99■□□□□ 0.15
TMEM54-205ENST00000475208 S100A9P06702 114 aaKnown RBP15.99■□□□□ 0.15
TMEM54-205ENST00000475208 OR5AL1P0C617 328 aa15.99■□□□□ 0.15
TMEM54-205ENST00000475208 DERL1Q9BUN8 251 aa15.99■□□□□ 0.15
TMEM54-205ENST00000475208 SCO2A0A1W2PP80 73 aa15.98■□□□□ 0.15
TMEM54-205ENST00000475208 BCL2L11O43521 198 aa15.98■□□□□ 0.15
TMEM54-205ENST00000475208 SSTP61278 116 aa15.98■□□□□ 0.15
TMEM54-205ENST00000475208 MBD3L1Q8WWY6 194 aa15.98■□□□□ 0.15
TMEM54-205ENST00000475208 TRBV25-1A0A075B6N4 114 aa15.97■□□□□ 0.15
TMEM54-205ENST00000475208 UMAD1C9J7I0 102 aa15.97■□□□□ 0.15
TMEM54-205ENST00000475208 BAGE2Q86Y30 109 aa15.97■□□□□ 0.15
TMEM54-205ENST00000475208 MLST8Q9BVC4 326 aa15.97■□□□□ 0.15
TMEM54-205ENST00000475208 KANTRA0A1W2PQU2 76 aa15.96■□□□□ 0.15
TMEM54-205ENST00000475208 SMIM17P0DL12 118 aa15.96■□□□□ 0.15
TMEM54-205ENST00000475208 SDIM1Q6ZPB5 146 aa15.96■□□□□ 0.15
TMEM54-205ENST00000475208 FAM213BQ8TBF2 198 aa15.95■□□□□ 0.14
TMEM54-205ENST00000475208 SFT2D1Q8WV19 159 aa15.95■□□□□ 0.14
TMEM54-205ENST00000475208 AP1S3Q96PC3 154 aa15.95■□□□□ 0.14
TMEM54-205ENST00000475208 KIF25-AS1Q9Y6Z4 181 aa15.95■□□□□ 0.14
TMEM54-205ENST00000475208 A0A1B0GV50 99 aa15.94■□□□□ 0.14
TMEM54-205ENST00000475208 PFDN1O60925 122 aa15.94■□□□□ 0.14
TMEM54-205ENST00000475208 IQCJQ1A5X6 159 aa15.94■□□□□ 0.14
TMEM54-205ENST00000475208 CLRN3Q8NCR9 226 aa15.94■□□□□ 0.14
TMEM54-205ENST00000475208 IGLV10-54A0A075B6I4 117 aa15.93■□□□□ 0.14
TMEM54-205ENST00000475208 TMUB2Q71RG4 321 aa15.93■□□□□ 0.14
TMEM54-205ENST00000475208 IGHV1-24A0A0C4DH33 117 aa15.92■□□□□ 0.14
TMEM54-205ENST00000475208 MT1HL1P0DM35 61 aa15.92■□□□□ 0.14
TMEM54-205ENST00000475208 REG3AQ06141 175 aa15.92■□□□□ 0.14
TMEM54-205ENST00000475208 CNBPP62633 177 aaKnown RBP15.91■□□□□ 0.14
TMEM54-205ENST00000475208 EIF5AP63241 154 aaKnown RBP15.91■□□□□ 0.14
TMEM54-205ENST00000475208 hDV102S1A0JD36 115 aa15.9■□□□□ 0.14
TMEM54-205ENST00000475208 MGPP08493 103 aa15.9■□□□□ 0.14
TMEM54-205ENST00000475208 CIRBPQ14011 172 aaKnown RBP15.9■□□□□ 0.14
TMEM54-205ENST00000475208 H2AFB1P0C5Y9 115 aa15.89■□□□□ 0.13
TMEM54-205ENST00000475208 C20orf203Q8NBC4 194 aa15.89■□□□□ 0.13
TMEM54-205ENST00000475208 M0QY20 66 aa15.88■□□□□ 0.13
TMEM54-205ENST00000475208 Q6ZRU5 148 aa15.88■□□□□ 0.13
TMEM54-205ENST00000475208 SUMO4Q6EEV6 95 aa15.87■□□□□ 0.13
TMEM54-205ENST00000475208 TPPP3Q9BW30 176 aa15.87■□□□□ 0.13
TMEM54-205ENST00000475208 IGHV3-64A0A075B6Q5 118 aa15.86■□□□□ 0.13
TMEM54-205ENST00000475208 TRAV8-4A0A0B4J246 113 aa15.86■□□□□ 0.13
TMEM54-205ENST00000475208 H7C1H1 209 aa15.86■□□□□ 0.13
TMEM54-205ENST00000475208 P01737 135 aa15.86■□□□□ 0.13
TMEM54-205ENST00000475208 GZMBP10144 247 aa15.85■□□□□ 0.13
TMEM54-205ENST00000475208 RPL35P42766 123 aaKnown RBP15.85■□□□□ 0.13
TMEM54-205ENST00000475208 TMEM243Q9BU79 118 aa15.85■□□□□ 0.13
TMEM54-205ENST00000475208 AP5S1Q9NUS5 200 aa15.85■□□□□ 0.13
TMEM54-205ENST00000475208 IGLV4-60A0A075B6I1 120 aa15.84■□□□□ 0.13
TMEM54-205ENST00000475208 CHTF8P0CG12 524 aa15.84■□□□□ 0.13
TMEM54-205ENST00000475208 NKX2-5P52952 324 aaPredicted RBP15.84■□□□□ 0.13
TMEM54-205ENST00000475208 TCTE3Q8IZS6 198 aa15.84■□□□□ 0.13
TMEM54-205ENST00000475208 FER1L6-AS1Q8NA97 138 aa15.84■□□□□ 0.13
TMEM54-205ENST00000475208 DPH3Q96FX2 82 aa15.84■□□□□ 0.13
TMEM54-205ENST00000475208 GFRA4Q9GZZ7 299 aa15.84■□□□□ 0.13
TMEM54-205ENST00000475208 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.83■□□□□ 0.12
TMEM54-205ENST00000475208 A0A1B0GUV1 79 aa15.83■□□□□ 0.12
TMEM54-205ENST00000475208 SLPIP03973 132 aa15.83■□□□□ 0.12
TMEM54-205ENST00000475208 IGLC6P0CF74 106 aa15.83■□□□□ 0.12
TMEM54-205ENST00000475208 RAB5CP51148 216 aa15.83■□□□□ 0.12
TMEM54-205ENST00000475208 CCL20P78556 96 aa15.83■□□□□ 0.12
TMEM54-205ENST00000475208 A0A087WYN8 130 aa15.82■□□□□ 0.12
TMEM54-205ENST00000475208 RNF185Q96GF1 192 aa15.82■□□□□ 0.12
TMEM54-205ENST00000475208 TRAV1-1A0A0B4J248 108 aa15.81■□□□□ 0.12
TMEM54-205ENST00000475208 OR2D3Q8NGH3 330 aa15.81■□□□□ 0.12
TMEM54-205ENST00000475208 SPACA4Q8TDM5 124 aa15.81■□□□□ 0.12
TMEM54-205ENST00000475208 RPS20P60866 119 aaKnown RBP15.8■□□□□ 0.12
TMEM54-205ENST00000475208 CACNG7P62955 275 aa15.8■□□□□ 0.12
TMEM54-205ENST00000475208 CENPWQ5EE01 88 aa15.8■□□□□ 0.12
TMEM54-205ENST00000475208 RASL11AQ6T310 242 aa15.8■□□□□ 0.12
TMEM54-205ENST00000475208 C11orf52Q96A22 123 aa15.8■□□□□ 0.12
TMEM54-205ENST00000475208 EIF5AL1Q6IS14 154 aaKnown RBP15.79■□□□□ 0.12
TMEM54-205ENST00000475208 Q6ZNX1 250 aa15.79■□□□□ 0.12
TMEM54-205ENST00000475208 PGLYRP4Q96LB8 373 aa15.79■□□□□ 0.12
TMEM54-205ENST00000475208 MANBALQ9NQG1 85 aa15.79■□□□□ 0.12
TMEM54-205ENST00000475208 WDR73Q6P4I2 378 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms