RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 RAB4BP61018 213 aa8.19□□□□□ -1.1
CLIP2-204ENST00000474962 C10orf91Q5T1B1 145 aa8.19□□□□□ -1.1
CLIP2-204ENST00000474962 SLC25A29Q8N8R3 303 aa8.19□□□□□ -1.1
CLIP2-204ENST00000474962 NUP35Q8NFH5 326 aa8.19□□□□□ -1.1
CLIP2-204ENST00000474962 VSIG2Q96IQ7 327 aa8.19□□□□□ -1.1
CLIP2-204ENST00000474962 CTDSP1Q9GZU7 261 aa8.19□□□□□ -1.1
CLIP2-204ENST00000474962 DPH3P1Q9H4G8 78 aa8.19□□□□□ -1.1
CLIP2-204ENST00000474962 CARHSP1Q9Y2V2 147 aaKnown RBP8.19□□□□□ -1.1
CLIP2-204ENST00000474962 ABCA13Q86UQ4 5058 aa8.19□□□□□ -1.1
CLIP2-204ENST00000474962 H7C1H1 209 aa8.18□□□□□ -1.1
CLIP2-204ENST00000474962 K7EQD1 137 aa8.18□□□□□ -1.1
CLIP2-204ENST00000474962 SNAPINO95295 136 aa8.18□□□□□ -1.1
CLIP2-204ENST00000474962 S100A8P05109 93 aa8.18□□□□□ -1.1
CLIP2-204ENST00000474962 ESRGQ1W209 222 aa8.18□□□□□ -1.1
CLIP2-204ENST00000474962 KCNIP4Q6PIL6 250 aa8.18□□□□□ -1.1
CLIP2-204ENST00000474962 SH2D6Q7Z4S9 175 aa8.18□□□□□ -1.1
CLIP2-204ENST00000474962 SLC7A5P1Q8MH63 180 aa8.18□□□□□ -1.1
CLIP2-204ENST00000474962 SVBPQ8N300 66 aa8.18□□□□□ -1.1
CLIP2-204ENST00000474962 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.18□□□□□ -1.1
CLIP2-204ENST00000474962 Q9H8V8 135 aa8.18□□□□□ -1.1
CLIP2-204ENST00000474962 A0A1B0GW15 77 aa8.17□□□□□ -1.1
CLIP2-204ENST00000474962 S100PP25815 95 aa8.17□□□□□ -1.1
CLIP2-204ENST00000474962 RHEBQ15382 184 aa8.17□□□□□ -1.1
CLIP2-204ENST00000474962 UFSP1Q6NVU6 142 aa8.17□□□□□ -1.1
CLIP2-204ENST00000474962 NEGR1Q7Z3B1 354 aa8.17□□□□□ -1.1
CLIP2-204ENST00000474962 C6orf223Q8N319 242 aa8.17□□□□□ -1.1
CLIP2-204ENST00000474962 CLRN3Q8NCR9 226 aa8.17□□□□□ -1.1
CLIP2-204ENST00000474962 RPS10P5Q9NQ39 176 aa8.17□□□□□ -1.1
CLIP2-204ENST00000474962 HSPG2P98160 4391 aa8.17□□□□□ -1.1
CLIP2-204ENST00000474962 A0A096LPF7 62 aa8.16□□□□□ -1.1
CLIP2-204ENST00000474962 C7orf77A4D0Y5 90 aa8.16□□□□□ -1.1
CLIP2-204ENST00000474962 CAMPP49913 170 aa8.16□□□□□ -1.1
CLIP2-204ENST00000474962 RPL36AP83881 106 aaKnown RBP8.16□□□□□ -1.1
CLIP2-204ENST00000474962 Q6ZSN1 163 aa8.16□□□□□ -1.1
CLIP2-204ENST00000474962 RPL36ALQ969Q0 106 aaKnown RBP8.16□□□□□ -1.1
CLIP2-204ENST00000474962 LRP1BQ9NZR2 4599 aa8.16□□□□□ -1.1
CLIP2-204ENST00000474962 TRBV10-1A0A0K0K1A3 114 aa8.15□□□□□ -1.1
CLIP2-204ENST00000474962 LOC100131303A0A0U1RQF7 123 aa8.15□□□□□ -1.1
CLIP2-204ENST00000474962 GAGE12JA6NER3 117 aa8.15□□□□□ -1.1
CLIP2-204ENST00000474962 EIF4EBP3O60516 100 aaPredicted RBP8.15□□□□□ -1.1
CLIP2-204ENST00000474962 GAGE1Q13065 139 aa8.15□□□□□ -1.1
CLIP2-204ENST00000474962 GAGE4Q13068 117 aa8.15□□□□□ -1.1
CLIP2-204ENST00000474962 GAGE5Q13069 117 aa8.15□□□□□ -1.1
CLIP2-204ENST00000474962 GAGE13Q4V321 117 aa8.15□□□□□ -1.1
CLIP2-204ENST00000474962 LCE2AQ5TA79 106 aaPredicted RBP8.15□□□□□ -1.1
CLIP2-204ENST00000474962 MRPL54Q6P161 138 aaKnown RBP8.15□□□□□ -1.1
CLIP2-204ENST00000474962 IMMP2LQ96T52 175 aa8.15□□□□□ -1.1
CLIP2-204ENST00000474962 KRTAP1-5Q9BYS1 174 aa8.15□□□□□ -1.1
CLIP2-204ENST00000474962 TMEM191AQ9H0A3 160 aa8.15□□□□□ -1.1
CLIP2-204ENST00000474962 KIF25-AS1Q9Y6Z4 181 aa8.15□□□□□ -1.1
CLIP2-204ENST00000474962 A0A087WWC5 75 aa8.14□□□□□ -1.11
CLIP2-204ENST00000474962 HBBP68871 147 aa8.14□□□□□ -1.11
CLIP2-204ENST00000474962 ATP5L2Q7Z4Y8 100 aa8.14□□□□□ -1.11
CLIP2-204ENST00000474962 ATP6V0E2Q8NHE4 81 aa8.14□□□□□ -1.11
CLIP2-204ENST00000474962 BTF3L4Q96K17 158 aa8.14□□□□□ -1.11
CLIP2-204ENST00000474962 KRTAP4-5Q9BYR2 181 aa8.14□□□□□ -1.11
CLIP2-204ENST00000474962 TMEM242Q9NWH2 141 aa8.14□□□□□ -1.11
CLIP2-204ENST00000474962 TNFRSF18Q9Y5U5 241 aa8.14□□□□□ -1.11
CLIP2-204ENST00000474962 TRBV7-3A0A075B6L6 115 aa8.13□□□□□ -1.11
CLIP2-204ENST00000474962 LINC00315P59091 139 aa8.13□□□□□ -1.11
CLIP2-204ENST00000474962 SUMO4Q6EEV6 95 aa8.13□□□□□ -1.11
CLIP2-204ENST00000474962 RASL11AQ6T310 242 aa8.13□□□□□ -1.11
CLIP2-204ENST00000474962 C16orf90A8MZG2 172 aa8.12□□□□□ -1.11
CLIP2-204ENST00000474962 FRZBQ92765 325 aa8.12□□□□□ -1.11
CLIP2-204ENST00000474962 DNAJC30Q96LL9 226 aa8.12□□□□□ -1.11
CLIP2-204ENST00000474962 URGCP-MRPS24S4R325 110 aa8.12□□□□□ -1.11
CLIP2-204ENST00000474962 TRAV9-1A0A075B6T8 112 aa8.11□□□□□ -1.11
CLIP2-204ENST00000474962 M0QY20 66 aa8.11□□□□□ -1.11
CLIP2-204ENST00000474962 LYPD5Q6UWN5 251 aa8.11□□□□□ -1.11
CLIP2-204ENST00000474962 AMN1Q8IY45 258 aa8.11□□□□□ -1.11
CLIP2-204ENST00000474962 NEXN-AS1Q8NBZ9 246 aa8.11□□□□□ -1.11
CLIP2-204ENST00000474962 UPK3BQ9BT76 320 aa8.11□□□□□ -1.11
CLIP2-204ENST00000474962 GTSF1LQ9H1H1 148 aa8.11□□□□□ -1.11
CLIP2-204ENST00000474962 NIT2Q9NQR4 276 aa8.11□□□□□ -1.11
CLIP2-204ENST00000474962 MRPS16Q9Y3D3 137 aaKnown RBP8.11□□□□□ -1.11
CLIP2-204ENST00000474962 DNAH5Q8TE73 4624 aa8.11□□□□□ -1.11
CLIP2-204ENST00000474962 TRAV8-6A0A0B4J262 113 aa8.1□□□□□ -1.11
CLIP2-204ENST00000474962 TRAV26-2A0A0B4J265 109 aa8.1□□□□□ -1.11
CLIP2-204ENST00000474962 PPP1R17O96001 155 aa8.1□□□□□ -1.11
CLIP2-204ENST00000474962 RAB4AP20338 218 aa8.1□□□□□ -1.11
CLIP2-204ENST00000474962 FAM104BQ5XKR9 115 aa8.1□□□□□ -1.11
CLIP2-204ENST00000474962 GATD1Q8NB37 220 aa8.1□□□□□ -1.11
CLIP2-204ENST00000474962 MRAP2Q96G30 205 aa8.1□□□□□ -1.11
CLIP2-204ENST00000474962 A0A1B0GXF2 115 aa8.09□□□□□ -1.11
CLIP2-204ENST00000474962 CKS2P33552 79 aa8.09□□□□□ -1.11
CLIP2-204ENST00000474962 UBE2D3P61077 147 aa8.09□□□□□ -1.11
CLIP2-204ENST00000474962 UBE2D2P62837 147 aa8.09□□□□□ -1.11
CLIP2-204ENST00000474962 OR10J3Q5JRS4 329 aa8.09□□□□□ -1.11
CLIP2-204ENST00000474962 SPATA12Q7Z6I5 190 aa8.09□□□□□ -1.11
CLIP2-204ENST00000474962 DAZ4Q86SG3 579 aaKnown RBP8.09□□□□□ -1.11
CLIP2-204ENST00000474962 DAZ3Q9NR90 486 aaKnown RBP8.09□□□□□ -1.11
CLIP2-204ENST00000474962 Q9UF83 564 aa8.09□□□□□ -1.11
CLIP2-204ENST00000474962 APOBP04114 4563 aaKnown RBP8.08□□□□□ -1.12
CLIP2-204ENST00000474962 IGHV3-38A0A0C4DH36 116 aa8.08□□□□□ -1.12
CLIP2-204ENST00000474962 TIRAPP58753 221 aa8.08□□□□□ -1.12
CLIP2-204ENST00000474962 KRTAP10-2P60368 255 aa8.08□□□□□ -1.12
CLIP2-204ENST00000474962 COX19Q49B96 90 aa8.08□□□□□ -1.12
CLIP2-204ENST00000474962 TMEM97Q5BJF2 176 aa8.08□□□□□ -1.12
CLIP2-204ENST00000474962 RNF185Q96GF1 192 aa8.08□□□□□ -1.12
CLIP2-204ENST00000474962 SIVA1O15304 175 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms