RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 ROS1P08922 2347 aa2.96□□□□□ -1.93
USP16-205ENST00000474835 TINCRA0A1B0GVN0 87 aa2.96□□□□□ -1.94
USP16-205ENST00000474835 ZNF815PA8K554 130 aa2.96□□□□□ -1.94
USP16-205ENST00000474835 NDUFA1O15239 70 aa2.96□□□□□ -1.94
USP16-205ENST00000474835 RPL27AP46776 148 aaKnown RBP2.96□□□□□ -1.94
USP16-205ENST00000474835 CXorf67Q86X51 503 aaPredicted RBP2.96□□□□□ -1.94
USP16-205ENST00000474835 TMEM105Q8N8V8 129 aa2.96□□□□□ -1.94
USP16-205ENST00000474835 TMEM160Q9NX00 188 aa2.96□□□□□ -1.94
USP16-205ENST00000474835 CADP27708 2225 aa2.96□□□□□ -1.94
USP16-205ENST00000474835 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.96□□□□□ -1.94
USP16-205ENST00000474835 C19orf84I3L1E1 186 aa2.96□□□□□ -1.94
USP16-205ENST00000474835 UBE2E1P51965 193 aa2.96□□□□□ -1.94
USP16-205ENST00000474835 EDDM3AQ14507 147 aa2.96□□□□□ -1.94
USP16-205ENST00000474835 IGFL3Q6UXB1 125 aa2.96□□□□□ -1.94
USP16-205ENST00000474835 VMO1Q7Z5L0 202 aa2.96□□□□□ -1.94
USP16-205ENST00000474835 CHCHD7Q9BUK0 85 aa2.96□□□□□ -1.94
USP16-205ENST00000474835 CELA1Q9UNI1 258 aa2.96□□□□□ -1.94
USP16-205ENST00000474835 LOC100131303A0A0U1RQF7 123 aa2.96□□□□□ -1.94
USP16-205ENST00000474835 VSIG2Q96IQ7 327 aa2.96□□□□□ -1.94
USP16-205ENST00000474835 TRGV11A0A075B6L2 103 aa2.95□□□□□ -1.94
USP16-205ENST00000474835 H7BZZ5 65 aa2.95□□□□□ -1.94
USP16-205ENST00000474835 RPL28P46779 137 aaKnown RBP2.95□□□□□ -1.94
USP16-205ENST00000474835 LYPD2Q6UXB3 125 aa2.95□□□□□ -1.94
USP16-205ENST00000474835 PRIMA1Q86XR5 153 aa2.95□□□□□ -1.94
USP16-205ENST00000474835 WFDC3Q8IUB2 231 aa2.95□□□□□ -1.94
USP16-205ENST00000474835 RNASE6Q93091 150 aaKnown RBP2.95□□□□□ -1.94
USP16-205ENST00000474835 PIMREGQ9BSJ6 248 aa2.95□□□□□ -1.94
USP16-205ENST00000474835 CACNA1BQ00975 2339 aa2.95□□□□□ -1.94
USP16-205ENST00000474835 POLEQ07864 2286 aa2.95□□□□□ -1.94
USP16-205ENST00000474835 TRAV8-4A0A0B4J246 113 aa2.95□□□□□ -1.94
USP16-205ENST00000474835 COX7A2LO14548 114 aa2.95□□□□□ -1.94
USP16-205ENST00000474835 CCL3L1P16619 93 aa2.95□□□□□ -1.94
USP16-205ENST00000474835 TIRAPP58753 221 aa2.95□□□□□ -1.94
USP16-205ENST00000474835 RPL18AQ02543 176 aaKnown RBP2.95□□□□□ -1.94
USP16-205ENST00000474835 FHL2Q14192 279 aa2.95□□□□□ -1.94
USP16-205ENST00000474835 VMA21Q3ZAQ7 101 aa2.95□□□□□ -1.94
USP16-205ENST00000474835 FRAS1Q86XX4 4008 aa2.95□□□□□ -1.94
USP16-205ENST00000474835 TRAV2A0A0B4J234 112 aa2.95□□□□□ -1.94
USP16-205ENST00000474835 H3BTX0 84 aa2.95□□□□□ -1.94
USP16-205ENST00000474835 PPP1R17O96001 155 aa2.95□□□□□ -1.94
USP16-205ENST00000474835 IGHV4-31P0DP07 118 aa2.95□□□□□ -1.94
USP16-205ENST00000474835 MALP21145 153 aa2.95□□□□□ -1.94
USP16-205ENST00000474835 PLA2G2CQ5R387 149 aa2.95□□□□□ -1.94
USP16-205ENST00000474835 TMEM86BQ8N661 226 aa2.95□□□□□ -1.94
USP16-205ENST00000474835 C20orf203Q8NBC4 194 aa2.95□□□□□ -1.94
USP16-205ENST00000474835 Q8TAT8 98 aa2.95□□□□□ -1.94
USP16-205ENST00000474835 AAMDCQ9H7C9 122 aa2.95□□□□□ -1.94
USP16-205ENST00000474835 IGKV2-28A0A075B6P5 120 aa2.94□□□□□ -1.94
USP16-205ENST00000474835 IGHV1-58A0A0C4DH39 117 aa2.94□□□□□ -1.94
USP16-205ENST00000474835 IGKV2D-28P01615 120 aa2.94□□□□□ -1.94
USP16-205ENST00000474835 KLRB1Q12918 225 aa2.94□□□□□ -1.94
USP16-205ENST00000474835 ANXA2RQ3ZCQ2 193 aa2.94□□□□□ -1.94
USP16-205ENST00000474835 MAFAQ8NHW3 353 aaPredicted RBP2.94□□□□□ -1.94
USP16-205ENST00000474835 LINC01560Q8TB33 94 aa2.94□□□□□ -1.94
USP16-205ENST00000474835 IGHV7-81A0A0B4J1V7 117 aa2.94□□□□□ -1.94
USP16-205ENST00000474835 SNCGO76070 127 aa2.94□□□□□ -1.94
USP16-205ENST00000474835 IGHV3-48P01763 117 aa2.94□□□□□ -1.94
USP16-205ENST00000474835 IGF1P05019 195 aa2.94□□□□□ -1.94
USP16-205ENST00000474835 PLGLAQ15195 96 aa2.94□□□□□ -1.94
USP16-205ENST00000474835 DEFB119Q8N690 84 aa2.94□□□□□ -1.94
USP16-205ENST00000474835 RP1L1Q8IWN7 2480 aaPredicted RBP2.94□□□□□ -1.94
USP16-205ENST00000474835 A0A096LNT2 108 aa2.94□□□□□ -1.94
USP16-205ENST00000474835 A0A1W2PRX2 142 aa2.94□□□□□ -1.94
USP16-205ENST00000474835 IGHV3-30-3P0DP02 117 aa2.94□□□□□ -1.94
USP16-205ENST00000474835 NANOS2P60321 138 aaKnown RBP2.94□□□□□ -1.94
USP16-205ENST00000474835 SUMO4Q6EEV6 95 aa2.94□□□□□ -1.94
USP16-205ENST00000474835 C11orf71Q6IPW1 123 aa2.94□□□□□ -1.94
USP16-205ENST00000474835 Q8N9W7 124 aa2.94□□□□□ -1.94
USP16-205ENST00000474835 Q96MF0 132 aa2.94□□□□□ -1.94
USP16-205ENST00000474835 HINT2Q9BX68 163 aa2.94□□□□□ -1.94
USP16-205ENST00000474835 TRGV5A0A0B4J1U4 118 aa2.93□□□□□ -1.94
USP16-205ENST00000474835 B9A039 149 aa2.93□□□□□ -1.94
USP16-205ENST00000474835 LYZL6O75951 148 aa2.93□□□□□ -1.94
USP16-205ENST00000474835 C9orf139Q6ZV77 190 aa2.93□□□□□ -1.94
USP16-205ENST00000474835 SERP2Q8N6R1 65 aa2.93□□□□□ -1.94
USP16-205ENST00000474835 IGHV3-16A0A0C4DH30 117 aa2.93□□□□□ -1.94
USP16-205ENST00000474835 ORM1P02763 201 aa2.93□□□□□ -1.94
USP16-205ENST00000474835 CCL8P80075 99 aa2.93□□□□□ -1.94
USP16-205ENST00000474835 C4orf26Q17RF5 130 aa2.93□□□□□ -1.94
USP16-205ENST00000474835 DUX3Q96PT4 197 aa2.93□□□□□ -1.94
USP16-205ENST00000474835 SCGB3A1Q96QR1 104 aa2.93□□□□□ -1.94
USP16-205ENST00000474835 PRO0628Q9UI54 55 aa2.93□□□□□ -1.94
USP16-205ENST00000474835 HECTD4Q9Y4D8 3996 aa2.93□□□□□ -1.94
USP16-205ENST00000474835 TRBV7-4A0A0J9YYF1 115 aa2.93□□□□□ -1.94
USP16-205ENST00000474835 FAM236AA0A1B0GUQ0 79 aa2.93□□□□□ -1.94
USP16-205ENST00000474835 FAM236BA0A1B0GV22 79 aa2.93□□□□□ -1.94
USP16-205ENST00000474835 ATOX1O00244 68 aa2.93□□□□□ -1.94
USP16-205ENST00000474835 IGHV4-38-2P0DP08 117 aa2.93□□□□□ -1.94
USP16-205ENST00000474835 PF4V1P10720 104 aa2.93□□□□□ -1.94
USP16-205ENST00000474835 TTC32Q5I0X7 151 aa2.93□□□□□ -1.94
USP16-205ENST00000474835 Q6ZSV7 163 aa2.93□□□□□ -1.94
USP16-205ENST00000474835 C10orf105Q8TEF2 133 aa2.93□□□□□ -1.94
USP16-205ENST00000474835 TIMM8AO60220 97 aaPredicted RBP2.92□□□□□ -1.94
USP16-205ENST00000474835 TIMM8BQ9Y5J9 83 aaPredicted RBP2.92□□□□□ -1.94
USP16-205ENST00000474835 ERC2-IT1O76042 136 aa2.92□□□□□ -1.94
USP16-205ENST00000474835 PRSS1P07477 247 aa2.92□□□□□ -1.94
USP16-205ENST00000474835 LYZP61626 148 aa2.92□□□□□ -1.94
USP16-205ENST00000474835 RPL39P62891 51 aaKnown RBP2.92□□□□□ -1.94
USP16-205ENST00000474835 C9orf66Q5T8R8 295 aa2.92□□□□□ -1.94
USP16-205ENST00000474835 LINC00477Q96M19 166 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms