RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 TMEM126AQ9H061 195 aa6.11□□□□□ -1.43
CCDC93-208ENST00000474546 MDFICQ9P1T7 246 aa6.11□□□□□ -1.43
CCDC93-208ENST00000474546 MALRD1Q5VYJ5 2156 aa6.11□□□□□ -1.43
CCDC93-208ENST00000474546 PCLOQ9Y6V0 5065 aa6.1□□□□□ -1.43
CCDC93-208ENST00000474546 TRRAPQ9Y4A5 3859 aa6.1□□□□□ -1.43
CCDC93-208ENST00000474546 A0A0J9YXY3 114 aa6.1□□□□□ -1.43
CCDC93-208ENST00000474546 TRBV27A0A0K0K1C4 114 aa6.1□□□□□ -1.43
CCDC93-208ENST00000474546 TRBV10-2A0A0K0K1G8 114 aa6.1□□□□□ -1.43
CCDC93-208ENST00000474546 J3QQQ9 107 aa6.1□□□□□ -1.43
CCDC93-208ENST00000474546 TRGV3P03979 118 aa6.1□□□□□ -1.43
CCDC93-208ENST00000474546 EFNA4P52798 201 aa6.1□□□□□ -1.43
CCDC93-208ENST00000474546 ZNF575Q86XF7 245 aa6.1□□□□□ -1.43
CCDC93-208ENST00000474546 CITED1Q99966 193 aa6.1□□□□□ -1.43
CCDC93-208ENST00000474546 TTTY13Q9BZ97 58 aa6.1□□□□□ -1.43
CCDC93-208ENST00000474546 TRAV8-2A0A0B4J237 113 aa6.09□□□□□ -1.43
CCDC93-208ENST00000474546 TRAV8-4A0A0B4J246 113 aa6.09□□□□□ -1.43
CCDC93-208ENST00000474546 IGIPA6NJ69 53 aa6.09□□□□□ -1.43
CCDC93-208ENST00000474546 TIMM17BO60830 172 aa6.09□□□□□ -1.43
CCDC93-208ENST00000474546 TCL1BO95988 128 aa6.09□□□□□ -1.43
CCDC93-208ENST00000474546 XGP55808 180 aa6.09□□□□□ -1.43
CCDC93-208ENST00000474546 TMEM170BQ5T4T1 132 aa6.09□□□□□ -1.43
CCDC93-208ENST00000474546 ZFP2Q6ZN57 461 aa6.09□□□□□ -1.43
CCDC93-208ENST00000474546 TRPT1Q86TN4 253 aaKnown RBP6.09□□□□□ -1.43
CCDC93-208ENST00000474546 WFDC11Q8NEX6 87 aa6.09□□□□□ -1.43
CCDC93-208ENST00000474546 PPDPFQ9H3Y8 114 aa6.09□□□□□ -1.43
CCDC93-208ENST00000474546 EDA2RQ9HAV5 297 aa6.09□□□□□ -1.43
CCDC93-208ENST00000474546 HYDINQ4G0P3 5121 aa6.08□□□□□ -1.44
CCDC93-208ENST00000474546 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.08□□□□□ -1.44
CCDC93-208ENST00000474546 H3BMM0 161 aa6.08□□□□□ -1.44
CCDC93-208ENST00000474546 LGALS9O00182 355 aa6.08□□□□□ -1.44
CCDC93-208ENST00000474546 MT-ATP8P03928 68 aa6.08□□□□□ -1.44
CCDC93-208ENST00000474546 MGPP08493 103 aa6.08□□□□□ -1.44
CCDC93-208ENST00000474546 GATA1P15976 413 aaPredicted RBP6.08□□□□□ -1.44
CCDC93-208ENST00000474546 SMCPP49901 116 aaPredicted RBP6.08□□□□□ -1.44
CCDC93-208ENST00000474546 POLR2KP53803 58 aaKnown RBP6.08□□□□□ -1.44
CCDC93-208ENST00000474546 NDUFV3P56181 108 aaKnown RBP6.08□□□□□ -1.44
CCDC93-208ENST00000474546 PIK3CD-AS1Q5SR53 167 aa6.08□□□□□ -1.44
CCDC93-208ENST00000474546 FAM159AQ6UWV7 190 aa6.08□□□□□ -1.44
CCDC93-208ENST00000474546 Q8N9W7 124 aa6.08□□□□□ -1.44
CCDC93-208ENST00000474546 UBE2WQ96B02 151 aa6.08□□□□□ -1.44
CCDC93-208ENST00000474546 FAM19A4Q96LR4 140 aa6.08□□□□□ -1.44
CCDC93-208ENST00000474546 TP53TG1Q9Y2A0 90 aa6.08□□□□□ -1.44
CCDC93-208ENST00000474546 PYGO1Q9Y3Y4 419 aa6.08□□□□□ -1.44
CCDC93-208ENST00000474546 ZANQ9Y493 2812 aa6.08□□□□□ -1.44
CCDC93-208ENST00000474546 ANK3Q12955 4377 aaKnown RBP6.08□□□□□ -1.44
CCDC93-208ENST00000474546 AKAP6Q13023 2319 aa6.08□□□□□ -1.44
CCDC93-208ENST00000474546 IGLV4-69A0A075B6H9 119 aa6.07□□□□□ -1.44
CCDC93-208ENST00000474546 CLPSL1A2RUU4 121 aa6.07□□□□□ -1.44
CCDC93-208ENST00000474546 PRAC2D3DTV9 90 aa6.07□□□□□ -1.44
CCDC93-208ENST00000474546 IGHV3-33P01772 117 aa6.07□□□□□ -1.44
CCDC93-208ENST00000474546 Q1RN00 199 aa6.07□□□□□ -1.44
CCDC93-208ENST00000474546 LINC01620Q4KN68 170 aa6.07□□□□□ -1.44
CCDC93-208ENST00000474546 ZFAND2AQ8N6M9 145 aa6.07□□□□□ -1.44
CCDC93-208ENST00000474546 CLUHP3Q96NS8 147 aa6.07□□□□□ -1.44
CCDC93-208ENST00000474546 C11orf21Q9P2W6 132 aa6.07□□□□□ -1.44
CCDC93-208ENST00000474546 ZNF580Q9UK33 172 aa6.07□□□□□ -1.44
CCDC93-208ENST00000474546 MOB4Q9Y3A3 225 aa6.07□□□□□ -1.44
CCDC93-208ENST00000474546 TRAV26-2A0A0B4J265 109 aa6.06□□□□□ -1.44
CCDC93-208ENST00000474546 TMEM223A0PJW6 202 aa6.06□□□□□ -1.44
CCDC93-208ENST00000474546 C9JAW5 83 aa6.06□□□□□ -1.44
CCDC93-208ENST00000474546 C19orf84I3L1E1 186 aa6.06□□□□□ -1.44
CCDC93-208ENST00000474546 K7EMT4 169 aa6.06□□□□□ -1.44
CCDC93-208ENST00000474546 PF4V1P10720 104 aa6.06□□□□□ -1.44
CCDC93-208ENST00000474546 PPIFP30405 207 aaKnown RBP6.06□□□□□ -1.44
CCDC93-208ENST00000474546 RNASE4P34096 147 aaKnown RBP6.06□□□□□ -1.44
CCDC93-208ENST00000474546 NDPQ00604 133 aa6.06□□□□□ -1.44
CCDC93-208ENST00000474546 CIRBPQ14011 172 aaKnown RBP6.06□□□□□ -1.44
CCDC93-208ENST00000474546 ECSCRQ19T08 205 aa6.06□□□□□ -1.44
CCDC93-208ENST00000474546 KRTAP24-1Q3LI83 254 aa6.06□□□□□ -1.44
CCDC93-208ENST00000474546 DEFB121Q5J5C9 76 aa6.06□□□□□ -1.44
CCDC93-208ENST00000474546 CLEC19AQ6UXS0 136 aa6.06□□□□□ -1.44
CCDC93-208ENST00000474546 C22orf34Q6ZV56 151 aa6.06□□□□□ -1.44
CCDC93-208ENST00000474546 RNF182Q8N6D2 247 aa6.06□□□□□ -1.44
CCDC93-208ENST00000474546 C14orf178Q8N769 122 aaPredicted RBP6.06□□□□□ -1.44
CCDC93-208ENST00000474546 TMEM101Q96IK0 257 aa6.06□□□□□ -1.44
CCDC93-208ENST00000474546 CARD19Q96LW7 228 aa6.06□□□□□ -1.44
CCDC93-208ENST00000474546 CCDC140Q96MF4 163 aa6.06□□□□□ -1.44
CCDC93-208ENST00000474546 FAM110AQ9BQ89 295 aa6.06□□□□□ -1.44
CCDC93-208ENST00000474546 OVOL2Q9BRP0 275 aa6.06□□□□□ -1.44
CCDC93-208ENST00000474546 PIMREGQ9BSJ6 248 aa6.06□□□□□ -1.44
CCDC93-208ENST00000474546 PLCE1Q9P212 2302 aa6.05□□□□□ -1.44
CCDC93-208ENST00000474546 TRAV41A0A0B4J266 112 aa6.05□□□□□ -1.44
CCDC93-208ENST00000474546 KLLNB2CW77 178 aa6.05□□□□□ -1.44
CCDC93-208ENST00000474546 I3L3M4 83 aa6.05□□□□□ -1.44
CCDC93-208ENST00000474546 ATP6V0E1O15342 81 aa6.05□□□□□ -1.44
CCDC93-208ENST00000474546 GAS8-AS1O95177 125 aa6.05□□□□□ -1.44
CCDC93-208ENST00000474546 INSL3P51460 131 aa6.05□□□□□ -1.44
CCDC93-208ENST00000474546 GPHB5Q86YW7 130 aa6.05□□□□□ -1.44
CCDC93-208ENST00000474546 TMEM263Q8WUH6 116 aaKnown RBP6.05□□□□□ -1.44
CCDC93-208ENST00000474546 NRGNQ92686 78 aa6.05□□□□□ -1.44
CCDC93-208ENST00000474546 SIRPDQ9H106 197 aa6.05□□□□□ -1.44
CCDC93-208ENST00000474546 KLK15Q9H2R5 256 aa6.05□□□□□ -1.44
CCDC93-208ENST00000474546 TENM1Q9UKZ4 2725 aa6.04□□□□□ -1.44
CCDC93-208ENST00000474546 TRGV11A0A075B6L2 103 aa6.04□□□□□ -1.44
CCDC93-208ENST00000474546 TRAV2A0A0B4J234 112 aa6.04□□□□□ -1.44
CCDC93-208ENST00000474546 TRBV7-7A0A0K0K1E9 115 aa6.04□□□□□ -1.44
CCDC93-208ENST00000474546 A4D1N5 150 aa6.04□□□□□ -1.44
CCDC93-208ENST00000474546 FAM90A27PA6NNH2 459 aa6.04□□□□□ -1.44
CCDC93-208ENST00000474546 SOCS3O14543 225 aa6.04□□□□□ -1.44
CCDC93-208ENST00000474546 DUSP14O95147 198 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms