RNA–Protein interactions for RNA: ENST00000474391.1

COL4A1-203, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 2

Gene COL4A1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-203ENST00000474391 TMEM250H0YL14 139 aa7.01□□□□□ -1.29
COL4A1-203ENST00000474391 CACNG7P62955 275 aa7.01□□□□□ -1.29
COL4A1-203ENST00000474391 TOR2AQ5JU69 321 aa7.01□□□□□ -1.29
COL4A1-203ENST00000474391 UQCC3Q6UW78 93 aa7.01□□□□□ -1.29
COL4A1-203ENST00000474391 MAPKAPK5-AS1Q8N8E1 139 aa7.01□□□□□ -1.29
COL4A1-203ENST00000474391 NUDT10Q8NFP7 164 aa7.01□□□□□ -1.29
COL4A1-203ENST00000474391 NUDT11Q96G61 164 aa7.01□□□□□ -1.29
COL4A1-203ENST00000474391 FAM210AQ96ND0 272 aa7.01□□□□□ -1.29
COL4A1-203ENST00000474391 TM2D2Q9BX73 214 aa7.01□□□□□ -1.29
COL4A1-203ENST00000474391 SMDT1Q9H4I9 107 aa7.01□□□□□ -1.29
COL4A1-203ENST00000474391 F5H697 171 aa7□□□□□ -1.29
COL4A1-203ENST00000474391 K7EN84 100 aa7□□□□□ -1.29
COL4A1-203ENST00000474391 SMIM17P0DL12 118 aa7□□□□□ -1.29
COL4A1-203ENST00000474391 CTRLP40313 264 aa7□□□□□ -1.29
COL4A1-203ENST00000474391 SSTP61278 116 aa7□□□□□ -1.29
COL4A1-203ENST00000474391 WDR73Q6P4I2 378 aa7□□□□□ -1.29
COL4A1-203ENST00000474391 Q8N1X5 172 aa7□□□□□ -1.29
COL4A1-203ENST00000474391 Q8N814 137 aa7□□□□□ -1.29
COL4A1-203ENST00000474391 OCC1Q8TAD7 63 aa7□□□□□ -1.29
COL4A1-203ENST00000474391 NTN5Q8WTR8 489 aaPredicted RBP7□□□□□ -1.29
COL4A1-203ENST00000474391 TPPP3Q9BW30 176 aa7□□□□□ -1.29
COL4A1-203ENST00000474391 CNFNQ9BYD5 112 aa7□□□□□ -1.29
COL4A1-203ENST00000474391 URGCP-MRPS24S4R325 110 aa7□□□□□ -1.29
COL4A1-203ENST00000474391 A0A087WX48 190 aa6.99□□□□□ -1.29
COL4A1-203ENST00000474391 M0QY20 66 aa6.99□□□□□ -1.29
COL4A1-203ENST00000474391 KRTAP10-1P60331 282 aa6.99□□□□□ -1.29
COL4A1-203ENST00000474391 LYZL1Q6UWQ5 148 aa6.99□□□□□ -1.29
COL4A1-203ENST00000474391 RPP21Q9H633 154 aaKnown RBP6.99□□□□□ -1.29
COL4A1-203ENST00000474391 COX11Q9Y6N1 276 aa6.99□□□□□ -1.29
COL4A1-203ENST00000474391 H7C1H1 209 aa6.98□□□□□ -1.29
COL4A1-203ENST00000474391 NTF3P20783 257 aa6.98□□□□□ -1.29
COL4A1-203ENST00000474391 GCSHP23434 173 aa6.98□□□□□ -1.29
COL4A1-203ENST00000474391 XGP55808 180 aa6.98□□□□□ -1.29
COL4A1-203ENST00000474391 ELOBQ15370 118 aa6.98□□□□□ -1.29
COL4A1-203ENST00000474391 TMEM97Q5BJF2 176 aa6.98□□□□□ -1.29
COL4A1-203ENST00000474391 ATRAIDQ6UW56 229 aa6.98□□□□□ -1.29
COL4A1-203ENST00000474391 NTM-AS1Q6ZSK4 140 aa6.98□□□□□ -1.29
COL4A1-203ENST00000474391 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.98□□□□□ -1.29
COL4A1-203ENST00000474391 DNAJC30Q96LL9 226 aa6.98□□□□□ -1.29
COL4A1-203ENST00000474391 RNASE7Q9H1E1 156 aaKnown RBP6.98□□□□□ -1.29
COL4A1-203ENST00000474391 KLK12Q9UKR0 248 aa6.98□□□□□ -1.29
COL4A1-203ENST00000474391 IGLV5-52A0A0A0MRZ9 124 aa6.97□□□□□ -1.29
COL4A1-203ENST00000474391 TRGC1P0CF51 173 aa6.97□□□□□ -1.29
COL4A1-203ENST00000474391 WFDC2Q14508 124 aa6.97□□□□□ -1.29
COL4A1-203ENST00000474391 SUMO4Q6EEV6 95 aa6.97□□□□□ -1.29
COL4A1-203ENST00000474391 FAM231DQ6ZW35 169 aa6.97□□□□□ -1.29
COL4A1-203ENST00000474391 COMMD7Q86VX2 200 aa6.97□□□□□ -1.29
COL4A1-203ENST00000474391 RMI2Q96E14 147 aa6.97□□□□□ -1.29
COL4A1-203ENST00000474391 DPH3P1Q9H4G8 78 aa6.97□□□□□ -1.29
COL4A1-203ENST00000474391 ABCA13Q86UQ4 5058 aa6.96□□□□□ -1.29
COL4A1-203ENST00000474391 MGPP08493 103 aa6.96□□□□□ -1.3
COL4A1-203ENST00000474391 PKIAP61925 76 aa6.96□□□□□ -1.3
COL4A1-203ENST00000474391 IQCJQ1A5X6 159 aa6.96□□□□□ -1.3
COL4A1-203ENST00000474391 MPV17L2Q567V2 206 aa6.96□□□□□ -1.3
COL4A1-203ENST00000474391 KCNIP4Q6PIL6 250 aa6.96□□□□□ -1.3
COL4A1-203ENST00000474391 RASL11AQ6T310 242 aa6.96□□□□□ -1.3
COL4A1-203ENST00000474391 GTSF1Q8WW33 167 aa6.96□□□□□ -1.3
COL4A1-203ENST00000474391 TMEM262E9PQX1 116 aa6.95□□□□□ -1.3
COL4A1-203ENST00000474391 S100A1P23297 94 aa6.95□□□□□ -1.3
COL4A1-203ENST00000474391 FOXA3P55318 350 aaPredicted RBP6.95□□□□□ -1.3
COL4A1-203ENST00000474391 Q0VG73 95 aa6.95□□□□□ -1.3
COL4A1-203ENST00000474391 CT83Q5H943 113 aa6.95□□□□□ -1.3
COL4A1-203ENST00000474391 ENHOQ6UWT2 76 aa6.95□□□□□ -1.3
COL4A1-203ENST00000474391 SLC7A5P1Q8MH63 180 aa6.95□□□□□ -1.3
COL4A1-203ENST00000474391 UBE2WQ96B02 151 aa6.95□□□□□ -1.3
COL4A1-203ENST00000474391 CHCHD5Q9BSY4 110 aa6.95□□□□□ -1.3
COL4A1-203ENST00000474391 EIF5A2Q9GZV4 153 aaKnown RBP6.95□□□□□ -1.3
COL4A1-203ENST00000474391 TRBV25-1A0A075B6N4 114 aa6.94□□□□□ -1.3
COL4A1-203ENST00000474391 IGKV2D-24A0A075B6R9 120 aa6.94□□□□□ -1.3
COL4A1-203ENST00000474391 GATCO43716 136 aaKnown RBP6.94□□□□□ -1.3
COL4A1-203ENST00000474391 ATP6V1G1O75348 118 aa6.94□□□□□ -1.3
COL4A1-203ENST00000474391 SRP19P09132 144 aaKnown RBP6.94□□□□□ -1.3
COL4A1-203ENST00000474391 TWIST1Q15672 202 aa6.94□□□□□ -1.3
COL4A1-203ENST00000474391 LINC01551Q86U37 167 aa6.94□□□□□ -1.3
COL4A1-203ENST00000474391 Q8N976 141 aa6.94□□□□□ -1.3
COL4A1-203ENST00000474391 BAALCQ8WXS3 180 aa6.94□□□□□ -1.3
COL4A1-203ENST00000474391 FRZBQ92765 325 aa6.94□□□□□ -1.3
COL4A1-203ENST00000474391 PGLYRP4Q96LB8 373 aa6.94□□□□□ -1.3
COL4A1-203ENST00000474391 SMIM7Q9BQ49 75 aa6.94□□□□□ -1.3
COL4A1-203ENST00000474391 TMEM70Q9BUB7 260 aa6.94□□□□□ -1.3
COL4A1-203ENST00000474391 NIT2Q9NQR4 276 aa6.94□□□□□ -1.3
COL4A1-203ENST00000474391 IGHV1-24A0A0C4DH33 117 aa6.93□□□□□ -1.3
COL4A1-203ENST00000474391 A8MWL6 223 aa6.93□□□□□ -1.3
COL4A1-203ENST00000474391 LECT2O14960 151 aa6.93□□□□□ -1.3
COL4A1-203ENST00000474391 CEBPGP53567 150 aa6.93□□□□□ -1.3
COL4A1-203ENST00000474391 PEA15Q15121 130 aa6.93□□□□□ -1.3
COL4A1-203ENST00000474391 C10orf91Q5T1B1 145 aa6.93□□□□□ -1.3
COL4A1-203ENST00000474391 C15orf54Q8N8G6 183 aa6.93□□□□□ -1.3
COL4A1-203ENST00000474391 PRR34Q9NV39 138 aa6.93□□□□□ -1.3
COL4A1-203ENST00000474391 ZNF727A8MUV8 499 aa6.92□□□□□ -1.3
COL4A1-203ENST00000474391 ANGP03950 147 aaKnown RBP6.92□□□□□ -1.3
COL4A1-203ENST00000474391 RBX1P62877 108 aa6.92□□□□□ -1.3
COL4A1-203ENST00000474391 MIAQ16674 131 aa6.92□□□□□ -1.3
COL4A1-203ENST00000474391 GATD1Q8NB37 220 aa6.92□□□□□ -1.3
COL4A1-203ENST00000474391 C1orf43Q9BWL3 253 aa6.92□□□□□ -1.3
COL4A1-203ENST00000474391 A0A1B0GUV1 79 aa6.91□□□□□ -1.3
COL4A1-203ENST00000474391 TMEM218A2RU14 115 aa6.91□□□□□ -1.3
COL4A1-203ENST00000474391 FAM231BA6NCW3 169 aa6.91□□□□□ -1.3
COL4A1-203ENST00000474391 CRPP02741 224 aa6.91□□□□□ -1.3
COL4A1-203ENST00000474391 GAGE6Q13070 117 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms