RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 C20orf78Q9BR46 151 aa7.32□□□□□ -1.24
PRPF38A-202ENST00000474048 CELA1Q9UNI1 258 aa7.32□□□□□ -1.24
PRPF38A-202ENST00000474048 U3KQK5 164 aa7.32□□□□□ -1.24
PRPF38A-202ENST00000474048 TRBV6-4A0A1B0GX49 114 aa7.31□□□□□ -1.24
PRPF38A-202ENST00000474048 TCAPO15273 167 aa7.31□□□□□ -1.24
PRPF38A-202ENST00000474048 Q0VG73 95 aa7.31□□□□□ -1.24
PRPF38A-202ENST00000474048 IQCJQ1A5X6 159 aa7.31□□□□□ -1.24
PRPF38A-202ENST00000474048 LINC00612Q8N6U2 182 aa7.31□□□□□ -1.24
PRPF38A-202ENST00000474048 POM121L12Q8N7R1 296 aa7.31□□□□□ -1.24
PRPF38A-202ENST00000474048 RPL39LQ96EH5 51 aaKnown RBP7.31□□□□□ -1.24
PRPF38A-202ENST00000474048 PRO0255Q9UI72 69 aa7.31□□□□□ -1.24
PRPF38A-202ENST00000474048 HHLA3Q9XRX5 114 aa7.31□□□□□ -1.24
PRPF38A-202ENST00000474048 M0QY20 66 aa7.3□□□□□ -1.24
PRPF38A-202ENST00000474048 PAX4O43316 350 aa7.3□□□□□ -1.24
PRPF38A-202ENST00000474048 GATA1P15976 413 aaPredicted RBP7.3□□□□□ -1.24
PRPF38A-202ENST00000474048 G0S2P27469 103 aa7.3□□□□□ -1.24
PRPF38A-202ENST00000474048 CHCHD1Q96BP2 118 aaKnown RBP7.3□□□□□ -1.24
PRPF38A-202ENST00000474048 SMIM2Q9BVW6 85 aa7.3□□□□□ -1.24
PRPF38A-202ENST00000474048 EDA2RQ9HAV5 297 aa7.3□□□□□ -1.24
PRPF38A-202ENST00000474048 AP5S1Q9NUS5 200 aa7.3□□□□□ -1.24
PRPF38A-202ENST00000474048 NOTCH1P46531 2555 aa7.3□□□□□ -1.24
PRPF38A-202ENST00000474048 SDHAF1A6NFY7 115 aa7.29□□□□□ -1.24
PRPF38A-202ENST00000474048 VCYO14598 125 aa7.29□□□□□ -1.24
PRPF38A-202ENST00000474048 LINC00614P0C842 121 aa7.29□□□□□ -1.24
PRPF38A-202ENST00000474048 LINC00315P59091 139 aa7.29□□□□□ -1.24
PRPF38A-202ENST00000474048 UFSP1Q6NVU6 142 aa7.29□□□□□ -1.24
PRPF38A-202ENST00000474048 SLC25A29Q8N8R3 303 aa7.29□□□□□ -1.24
PRPF38A-202ENST00000474048 ZNRF2Q8NHG8 242 aa7.29□□□□□ -1.24
PRPF38A-202ENST00000474048 PGPEP1Q9NXJ5 209 aa7.29□□□□□ -1.24
PRPF38A-202ENST00000474048 NACAE9PAV3 2078 aa7.28□□□□□ -1.24
PRPF38A-202ENST00000474048 TRBV7-3A0A075B6L6 115 aa7.28□□□□□ -1.24
PRPF38A-202ENST00000474048 TRAV10A0A0B4J240 114 aa7.28□□□□□ -1.24
PRPF38A-202ENST00000474048 TRBV6-5A0A0K0K1A5 114 aa7.28□□□□□ -1.24
PRPF38A-202ENST00000474048 GAGE12JA6NER3 117 aa7.28□□□□□ -1.24
PRPF38A-202ENST00000474048 I3L3M4 83 aa7.28□□□□□ -1.24
PRPF38A-202ENST00000474048 K7EMI3 77 aa7.28□□□□□ -1.24
PRPF38A-202ENST00000474048 SERF1AO75920 110 aa7.28□□□□□ -1.24
PRPF38A-202ENST00000474048 IFI27P40305 119 aaPredicted RBP7.28□□□□□ -1.24
PRPF38A-202ENST00000474048 GAGE1Q13065 139 aa7.28□□□□□ -1.24
PRPF38A-202ENST00000474048 GAGE4Q13068 117 aa7.28□□□□□ -1.24
PRPF38A-202ENST00000474048 GAGE5Q13069 117 aa7.28□□□□□ -1.24
PRPF38A-202ENST00000474048 COTL1Q14019 142 aa7.28□□□□□ -1.24
PRPF38A-202ENST00000474048 FHL2Q14192 279 aa7.28□□□□□ -1.24
PRPF38A-202ENST00000474048 GAGE13Q4V321 117 aa7.28□□□□□ -1.24
PRPF38A-202ENST00000474048 ORMDL2Q53FV1 153 aa7.28□□□□□ -1.24
PRPF38A-202ENST00000474048 NIT1Q86X76 327 aa7.28□□□□□ -1.24
PRPF38A-202ENST00000474048 Q8N8P6 123 aa7.28□□□□□ -1.24
PRPF38A-202ENST00000474048 NRACQ8N912 160 aa7.28□□□□□ -1.24
PRPF38A-202ENST00000474048 DEFB131BA0A096LNP1 70 aa7.27□□□□□ -1.25
PRPF38A-202ENST00000474048 A0A0J9YY99 117 aa7.27□□□□□ -1.25
PRPF38A-202ENST00000474048 NUDT3O95989 172 aa7.27□□□□□ -1.25
PRPF38A-202ENST00000474048 P0DMU3 169 aa7.27□□□□□ -1.25
PRPF38A-202ENST00000474048 FAM231AP0DMU4 169 aa7.27□□□□□ -1.25
PRPF38A-202ENST00000474048 FAM231CP0DMU5 169 aa7.27□□□□□ -1.25
PRPF38A-202ENST00000474048 GYPEP15421 78 aa7.27□□□□□ -1.25
PRPF38A-202ENST00000474048 AMTP48728 403 aa7.27□□□□□ -1.25
PRPF38A-202ENST00000474048 CRYBA4P53673 196 aa7.27□□□□□ -1.25
PRPF38A-202ENST00000474048 NANOS2P60321 138 aaKnown RBP7.27□□□□□ -1.25
PRPF38A-202ENST00000474048 SNRPEP62304 92 aaKnown RBP7.27□□□□□ -1.25
PRPF38A-202ENST00000474048 RPL32P62910 135 aaKnown RBP7.27□□□□□ -1.25
PRPF38A-202ENST00000474048 LAGE3Q14657 143 aa7.27□□□□□ -1.25
PRPF38A-202ENST00000474048 C12orf74Q32Q52 190 aa7.27□□□□□ -1.25
PRPF38A-202ENST00000474048 TMEM97Q5BJF2 176 aa7.27□□□□□ -1.25
PRPF38A-202ENST00000474048 Q6ZTC4 211 aa7.27□□□□□ -1.25
PRPF38A-202ENST00000474048 SH2D6Q7Z4S9 175 aa7.27□□□□□ -1.25
PRPF38A-202ENST00000474048 DAZ4Q86SG3 579 aaKnown RBP7.27□□□□□ -1.25
PRPF38A-202ENST00000474048 NEXN-AS1Q8NBZ9 246 aa7.27□□□□□ -1.25
PRPF38A-202ENST00000474048 TMEM18Q96B42 140 aa7.27□□□□□ -1.25
PRPF38A-202ENST00000474048 TMEM70Q9BUB7 260 aa7.27□□□□□ -1.25
PRPF38A-202ENST00000474048 DAZ3Q9NR90 486 aaKnown RBP7.27□□□□□ -1.25
PRPF38A-202ENST00000474048 ICOSQ9Y6W8 199 aa7.27□□□□□ -1.25
PRPF38A-202ENST00000474048 TRAV26-1A0A087WT03 109 aa7.26□□□□□ -1.25
PRPF38A-202ENST00000474048 LINC01549A6NIU2 74 aa7.26□□□□□ -1.25
PRPF38A-202ENST00000474048 GAS8-AS1O95177 125 aa7.26□□□□□ -1.25
PRPF38A-202ENST00000474048 BTF3P20290 206 aaKnown RBP7.26□□□□□ -1.25
PRPF38A-202ENST00000474048 SMAGPQ0VAQ4 97 aa7.26□□□□□ -1.25
PRPF38A-202ENST00000474048 PDZD11Q5EBL8 140 aa7.26□□□□□ -1.25
PRPF38A-202ENST00000474048 PHLDA1Q8WV24 401 aaPredicted RBP7.26□□□□□ -1.25
PRPF38A-202ENST00000474048 TRBV27A0A0K0K1C4 114 aa7.25□□□□□ -1.25
PRPF38A-202ENST00000474048 PRSS47A8MTI9 375 aa7.25□□□□□ -1.25
PRPF38A-202ENST00000474048 UBE2L6O14933 153 aa7.25□□□□□ -1.25
PRPF38A-202ENST00000474048 HBDP02042 147 aa7.25□□□□□ -1.25
PRPF38A-202ENST00000474048 HOXA5P20719 270 aa7.25□□□□□ -1.25
PRPF38A-202ENST00000474048 MRPL23Q16540 153 aaKnown RBP7.25□□□□□ -1.25
PRPF38A-202ENST00000474048 COA6Q5JTJ3 125 aaKnown RBP7.25□□□□□ -1.25
PRPF38A-202ENST00000474048 Q6ZSN1 163 aa7.25□□□□□ -1.25
PRPF38A-202ENST00000474048 NBEAL1Q6ZS30 2694 aa7.25□□□□□ -1.25
PRPF38A-202ENST00000474048 IGHV3-38A0A0C4DH36 116 aa7.24□□□□□ -1.25
PRPF38A-202ENST00000474048 A6NJY4 79 aa7.24□□□□□ -1.25
PRPF38A-202ENST00000474048 NEGR1Q7Z3B1 354 aa7.24□□□□□ -1.25
PRPF38A-202ENST00000474048 ATP6V0E2Q8NHE4 81 aa7.24□□□□□ -1.25
PRPF38A-202ENST00000474048 HSPB8Q9UJY1 196 aa7.24□□□□□ -1.25
PRPF38A-202ENST00000474048 TRBV25-1A0A075B6N4 114 aa7.23□□□□□ -1.25
PRPF38A-202ENST00000474048 C5orf52A6NGY3 159 aa7.23□□□□□ -1.25
PRPF38A-202ENST00000474048 POLR2KP53803 58 aaKnown RBP7.23□□□□□ -1.25
PRPF38A-202ENST00000474048 UBE2D3P61077 147 aa7.23□□□□□ -1.25
PRPF38A-202ENST00000474048 UBE2D2P62837 147 aa7.23□□□□□ -1.25
PRPF38A-202ENST00000474048 C15orf53Q8NAA6 179 aa7.23□□□□□ -1.25
PRPF38A-202ENST00000474048 CYSLTR1Q9Y271 337 aa7.23□□□□□ -1.25
PRPF38A-202ENST00000474048 IGHV1-24A0A0C4DH33 117 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms