RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	WFDC6	Q9BQY6	131 aa		0.31	□□□□□ -2.36
BBX-223	ENST00000473542	BICRA	Q9NZM4	1560 aa		0.31	□□□□□ -2.36
BBX-223	ENST00000473542	LRRC37A3	O60309	1634 aa		0.31	□□□□□ -2.36
BBX-223	ENST00000473542	SIPA1L3	O60292	1781 aa	Predicted RBP	0.3	□□□□□ -2.36
BBX-223	ENST00000473542	TRGV1	A0A0A0MS02	117 aa		0.3	□□□□□ -2.36
BBX-223	ENST00000473542	FAM92A	A1XBS5	289 aa		0.3	□□□□□ -2.36
BBX-223	ENST00000473542	APOC4-APOC2	K7ER74	178 aa		0.3	□□□□□ -2.36
BBX-223	ENST00000473542	NMB	P08949	121 aa		0.3	□□□□□ -2.36
BBX-223	ENST00000473542		Q5VV11	94 aa		0.3	□□□□□ -2.36
BBX-223	ENST00000473542	IFT140	Q96RY7	1462 aa		0.29	□□□□□ -2.36
BBX-223	ENST00000473542	TTC28	Q96AY4	2481 aa		0.29	□□□□□ -2.36
BBX-223	ENST00000473542	F5	P12259	2224 aa		0.29	□□□□□ -2.36
BBX-223	ENST00000473542	TRBV10-3	A0A0K0K1G6	114 aa		0.29	□□□□□ -2.36
BBX-223	ENST00000473542	SELENOW	P63302	87 aa		0.29	□□□□□ -2.36
BBX-223	ENST00000473542	CCDC58	Q4VC31	144 aa		0.29	□□□□□ -2.36
BBX-223	ENST00000473542	COPS9	Q8WXC6	57 aa		0.29	□□□□□ -2.36
BBX-223	ENST00000473542	FAT4	Q6V0I7	4981 aa		0.29	□□□□□ -2.36
BBX-223	ENST00000473542		Q5BKY6	102 aa		0.28	□□□□□ -2.36
BBX-223	ENST00000473542	CACNA1H	O95180	2353 aa		0.28	□□□□□ -2.36
BBX-223	ENST00000473542	PXDN	Q92626	1479 aa		0.28	□□□□□ -2.37
BBX-223	ENST00000473542	SYNE1	Q8NF91	8797 aa	Known RBP	0.28	□□□□□ -2.37
BBX-223	ENST00000473542	TPR	P12270	2363 aa	Known RBP	0.27	□□□□□ -2.37
BBX-223	ENST00000473542	NDUFA2	O43678	99 aa		0.27	□□□□□ -2.37
BBX-223	ENST00000473542	HMGN1	P05114	100 aa		0.27	□□□□□ -2.37
BBX-223	ENST00000473542	GCHFR	P30047	84 aa		0.27	□□□□□ -2.37
BBX-223	ENST00000473542	SPTSSB	Q8NFR3	76 aa		0.27	□□□□□ -2.37
BBX-223	ENST00000473542	ARL11	Q969Q4	196 aa		0.26	□□□□□ -2.37
BBX-223	ENST00000473542	GOLGA3	Q08378	1498 aa		0.25	□□□□□ -2.37
BBX-223	ENST00000473542	PIGBOS1	A0A0B4J2F0	54 aa		0.25	□□□□□ -2.37
BBX-223	ENST00000473542	SNRNP25	Q9BV90	132 aa	Known RBP	0.25	□□□□□ -2.37
BBX-223	ENST00000473542	LINC00470	Q9BZP3	86 aa		0.25	□□□□□ -2.37
BBX-223	ENST00000473542	ABCA12	Q86UK0	2595 aa		0.24	□□□□□ -2.37
BBX-223	ENST00000473542	CFTR	P13569	1480 aa		0.24	□□□□□ -2.37
BBX-223	ENST00000473542	CASKIN1	Q8WXD9	1431 aa		0.24	□□□□□ -2.37
BBX-223	ENST00000473542	SPAAR	A0A1B0GVQ0	90 aa		0.24	□□□□□ -2.37
BBX-223	ENST00000473542	SIX6	O95475	246 aa		0.24	□□□□□ -2.37
BBX-223	ENST00000473542	SPINK1	P00995	79 aa		0.24	□□□□□ -2.37
BBX-223	ENST00000473542	S100A7L2	Q5SY68	101 aa		0.24	□□□□□ -2.37
BBX-223	ENST00000473542	C12orf73	Q69YU5	71 aa		0.24	□□□□□ -2.37
BBX-223	ENST00000473542	PDCD10	Q9BUL8	212 aa		0.24	□□□□□ -2.37
BBX-223	ENST00000473542	SEC11C	Q9BY50	192 aa		0.24	□□□□□ -2.37
BBX-223	ENST00000473542	LINC00312	Q9Y6C7	94 aa		0.24	□□□□□ -2.37
BBX-223	ENST00000473542	MAST4	O15021	2626 aa		0.24	□□□□□ -2.37
BBX-223	ENST00000473542	ARFGEF1	Q9Y6D6	1849 aa		0.24	□□□□□ -2.37
BBX-223	ENST00000473542	TRAV1-2	A0A0B4J238	106 aa		0.23	□□□□□ -2.37
BBX-223	ENST00000473542	AGPAT4-IT1	Q9H0P7	198 aa		0.23	□□□□□ -2.37
BBX-223	ENST00000473542	RERGL	Q9H628	205 aa		0.23	□□□□□ -2.37
BBX-223	ENST00000473542	ANK2	Q01484	3957 aa		0.23	□□□□□ -2.37
BBX-223	ENST00000473542	GPR98	Q8WXG9	6306 aa		0.22	□□□□□ -2.37
BBX-223	ENST00000473542	PIN1P1	O15428	100 aa		0.22	□□□□□ -2.37
BBX-223	ENST00000473542	SMIM6	P0DI80	62 aa		0.22	□□□□□ -2.37
BBX-223	ENST00000473542	BAGE3	Q86Y29	109 aa		0.22	□□□□□ -2.37
BBX-223	ENST00000473542	ZMYM4	Q5VZL5	1548 aa		0.22	□□□□□ -2.37
BBX-223	ENST00000473542	PIEZO1	Q92508	2521 aa		0.22	□□□□□ -2.37
BBX-223	ENST00000473542	NWD2	Q9ULI1	1742 aa		0.21	□□□□□ -2.38
BBX-223	ENST00000473542	MYO7A	Q13402	2215 aa		0.21	□□□□□ -2.38
BBX-223	ENST00000473542		G3V318	75 aa		0.21	□□□□□ -2.38
BBX-223	ENST00000473542		K7EP13	123 aa		0.21	□□□□□ -2.38
BBX-223	ENST00000473542	HIST1H1D	P16402	221 aa	Known RBP	0.21	□□□□□ -2.38
BBX-223	ENST00000473542	BTG2	P78543	158 aa		0.21	□□□□□ -2.38
BBX-223	ENST00000473542	TSC22D3	Q99576	134 aa		0.21	□□□□□ -2.38
BBX-223	ENST00000473542	SERP1	Q9Y6X1	66 aa		0.21	□□□□□ -2.38
BBX-223	ENST00000473542	SPEF2	Q9C093	1822 aa		0.21	□□□□□ -2.38
BBX-223	ENST00000473542	LRP1	Q07954	4544 aa	Known RBP	0.21	□□□□□ -2.38
BBX-223	ENST00000473542		Q6AWC8	147 aa		0.2	□□□□□ -2.38
BBX-223	ENST00000473542	UBE2DNL	Q8IWF7	75 aa		0.2	□□□□□ -2.38
BBX-223	ENST00000473542	C1orf54	Q8WWF1	131 aa		0.2	□□□□□ -2.38
BBX-223	ENST00000473542	POLQ	O75417	2590 aa		0.2	□□□□□ -2.38
BBX-223	ENST00000473542	CAD	P27708	2225 aa		0.19	□□□□□ -2.38
BBX-223	ENST00000473542	TRAV13-2	A0A0B4J235	113 aa		0.19	□□□□□ -2.38
BBX-223	ENST00000473542	HCG22	E2RYF7	251 aa		0.19	□□□□□ -2.38
BBX-223	ENST00000473542	FAM213B	Q8TBF2	198 aa		0.19	□□□□□ -2.38
BBX-223	ENST00000473542	OTOG	Q6ZRI0	2925 aa		0.18	□□□□□ -2.38
BBX-223	ENST00000473542	FAM25A	B3EWG3	89 aa		0.18	□□□□□ -2.38
BBX-223	ENST00000473542	FAM25C	B3EWG5	89 aa		0.18	□□□□□ -2.38
BBX-223	ENST00000473542	FAM25G	B3EWG6	89 aa		0.18	□□□□□ -2.38
BBX-223	ENST00000473542	CCL18	P55774	89 aa		0.18	□□□□□ -2.38
BBX-223	ENST00000473542		Q8N8P6	123 aa		0.18	□□□□□ -2.38
BBX-223	ENST00000473542	NAA60	Q9H7X0	242 aa		0.18	□□□□□ -2.38
BBX-223	ENST00000473542	CELSR2	Q9HCU4	2923 aa		0.18	□□□□□ -2.38
BBX-223	ENST00000473542	GNG7	O60262	68 aa		0.17	□□□□□ -2.38
BBX-223	ENST00000473542	NAIP	Q13075	1403 aa		0.17	□□□□□ -2.38
BBX-223	ENST00000473542	LSM10	Q969L4	123 aa	Known RBP	0.17	□□□□□ -2.38
BBX-223	ENST00000473542	FAM107B	Q9H098	131 aa		0.17	□□□□□ -2.38
BBX-223	ENST00000473542	IFT172	Q9UG01	1749 aa		0.17	□□□□□ -2.38
BBX-223	ENST00000473542	DOCK11	Q5JSL3	2073 aa		0.17	□□□□□ -2.38
BBX-223	ENST00000473542	BCL9L	Q86UU0	1499 aa		0.16	□□□□□ -2.38
BBX-223	ENST00000473542	MEIG1	Q5JSS6	88 aa		0.16	□□□□□ -2.38
BBX-223	ENST00000473542	AQP10	Q96PS8	301 aa		0.16	□□□□□ -2.38
BBX-223	ENST00000473542	ZFYVE26	Q68DK2	2539 aa		0.16	□□□□□ -2.38
BBX-223	ENST00000473542	SPINK8	P0C7L1	97 aa		0.15	□□□□□ -2.39
BBX-223	ENST00000473542	FGF7	P21781	194 aa		0.15	□□□□□ -2.39
BBX-223	ENST00000473542	SSBP3-AS1	Q7Z2R9	100 aa		0.15	□□□□□ -2.39
BBX-223	ENST00000473542		R4GMQ9	66 aa		0.15	□□□□□ -2.39
BBX-223	ENST00000473542	PHLPP1	O60346	1717 aa		0.15	□□□□□ -2.39
BBX-223	ENST00000473542	ZNF609	O15014	1411 aa		0.14	□□□□□ -2.39
BBX-223	ENST00000473542	ZNF815P	A8K554	130 aa		0.14	□□□□□ -2.39
BBX-223	ENST00000473542	RBM3	P98179	157 aa	Known RBP	0.14	□□□□□ -2.39
BBX-223	ENST00000473542	CNFN	Q9BYD5	112 aa		0.14	□□□□□ -2.39
BBX-223	ENST00000473542	LENEP	Q9Y5L5	61 aa		0.14	□□□□□ -2.39

Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms