RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 SRIP30626 198 aa6.29□□□□□ -1.4
SMC4-214ENST00000472991 TWIST1Q15672 202 aa6.29□□□□□ -1.4
SMC4-214ENST00000472991 MRPL23Q16540 153 aaKnown RBP6.29□□□□□ -1.4
SMC4-214ENST00000472991 WDR73Q6P4I2 378 aa6.29□□□□□ -1.4
SMC4-214ENST00000472991 PRADC1Q9BSG0 188 aa6.29□□□□□ -1.4
SMC4-214ENST00000472991 KIF25-AS1Q9Y6Z4 181 aa6.29□□□□□ -1.4
SMC4-214ENST00000472991 FAM231BA6NCW3 169 aa6.28□□□□□ -1.4
SMC4-214ENST00000472991 F5H697 171 aa6.28□□□□□ -1.4
SMC4-214ENST00000472991 EVI2AP22794 236 aa6.28□□□□□ -1.4
SMC4-214ENST00000472991 FOXA3P55318 350 aaPredicted RBP6.28□□□□□ -1.4
SMC4-214ENST00000472991 CCL18P55774 89 aa6.28□□□□□ -1.4
SMC4-214ENST00000472991 RNF212Q495C1 297 aa6.28□□□□□ -1.4
SMC4-214ENST00000472991 NUP35Q8NFH5 326 aa6.28□□□□□ -1.4
SMC4-214ENST00000472991 BORCS7Q96B45 105 aa6.28□□□□□ -1.4
SMC4-214ENST00000472991 SEC11CQ9BY50 192 aa6.28□□□□□ -1.4
SMC4-214ENST00000472991 DPH3P1Q9H4G8 78 aa6.28□□□□□ -1.4
SMC4-214ENST00000472991 LINC00588Q9Y4M8 146 aa6.28□□□□□ -1.4
SMC4-214ENST00000472991 A0A1B0GUT8 65 aa6.27□□□□□ -1.41
SMC4-214ENST00000472991 SMIM27A0A1W2PRY6 76 aa6.27□□□□□ -1.41
SMC4-214ENST00000472991 GAGE12JA6NER3 117 aa6.27□□□□□ -1.41
SMC4-214ENST00000472991 PPP1R2P9O14990 202 aa6.27□□□□□ -1.41
SMC4-214ENST00000472991 LINC00315P59091 139 aa6.27□□□□□ -1.41
SMC4-214ENST00000472991 RAB4BP61018 213 aa6.27□□□□□ -1.41
SMC4-214ENST00000472991 GAGE1Q13065 139 aa6.27□□□□□ -1.41
SMC4-214ENST00000472991 GAGE4Q13068 117 aa6.27□□□□□ -1.41
SMC4-214ENST00000472991 GAGE5Q13069 117 aa6.27□□□□□ -1.41
SMC4-214ENST00000472991 ESRGQ1W209 222 aa6.27□□□□□ -1.41
SMC4-214ENST00000472991 GAGE13Q4V321 117 aa6.27□□□□□ -1.41
SMC4-214ENST00000472991 NEGR1Q7Z3B1 354 aa6.27□□□□□ -1.41
SMC4-214ENST00000472991 Q9UF83 564 aa6.27□□□□□ -1.41
SMC4-214ENST00000472991 NAT8BQ9UHF3 227 aa6.27□□□□□ -1.41
SMC4-214ENST00000472991 MT-ND4LP03901 98 aa6.26□□□□□ -1.41
SMC4-214ENST00000472991 LINC00694P0DN24 101 aa6.26□□□□□ -1.41
SMC4-214ENST00000472991 KRTAP5-3Q6L8H2 238 aa6.26□□□□□ -1.41
SMC4-214ENST00000472991 SMIM15Q7Z3B0 74 aa6.26□□□□□ -1.41
SMC4-214ENST00000472991 MRPS16Q9Y3D3 137 aaKnown RBP6.26□□□□□ -1.41
SMC4-214ENST00000472991 RYR3Q15413 4870 aa6.26□□□□□ -1.41
SMC4-214ENST00000472991 TRBV10-1A0A0K0K1A3 114 aa6.25□□□□□ -1.41
SMC4-214ENST00000472991 RIGQ13278 110 aa6.25□□□□□ -1.41
SMC4-214ENST00000472991 C10orf91Q5T1B1 145 aa6.25□□□□□ -1.41
SMC4-214ENST00000472991 SUMO4Q6EEV6 95 aa6.25□□□□□ -1.41
SMC4-214ENST00000472991 LYPD5Q6UWN5 251 aa6.25□□□□□ -1.41
SMC4-214ENST00000472991 SH2D6Q7Z4S9 175 aa6.25□□□□□ -1.41
SMC4-214ENST00000472991 NEXN-AS1Q8NBZ9 246 aa6.25□□□□□ -1.41
SMC4-214ENST00000472991 ATP6V0E2Q8NHE4 81 aa6.25□□□□□ -1.41
SMC4-214ENST00000472991 ZNRF2Q8NHG8 242 aa6.25□□□□□ -1.41
SMC4-214ENST00000472991 CARHSP1Q9Y2V2 147 aaKnown RBP6.25□□□□□ -1.41
SMC4-214ENST00000472991 FRAS1Q86XX4 4008 aa6.25□□□□□ -1.41
SMC4-214ENST00000472991 IGLV2-18A0A075B6J9 118 aa6.24□□□□□ -1.41
SMC4-214ENST00000472991 M0QY20 66 aa6.24□□□□□ -1.41
SMC4-214ENST00000472991 FAM3BP58499 235 aaPredicted RBP6.24□□□□□ -1.41
SMC4-214ENST00000472991 RPL36AP83881 106 aaKnown RBP6.24□□□□□ -1.41
SMC4-214ENST00000472991 MRPL54Q6P161 138 aaKnown RBP6.24□□□□□ -1.41
SMC4-214ENST00000472991 RPL36ALQ969Q0 106 aaKnown RBP6.24□□□□□ -1.41
SMC4-214ENST00000472991 TRBV7-3A0A075B6L6 115 aa6.23□□□□□ -1.41
SMC4-214ENST00000472991 TRAV26-2A0A0B4J265 109 aa6.23□□□□□ -1.41
SMC4-214ENST00000472991 H7C1H1 209 aa6.23□□□□□ -1.41
SMC4-214ENST00000472991 CAMPP49913 170 aa6.23□□□□□ -1.41
SMC4-214ENST00000472991 UBE2D3P61077 147 aa6.23□□□□□ -1.41
SMC4-214ENST00000472991 UBE2D2P62837 147 aa6.23□□□□□ -1.41
SMC4-214ENST00000472991 UPK3BQ9BT76 320 aa6.23□□□□□ -1.41
SMC4-214ENST00000472991 TMEM191AQ9H0A3 160 aa6.23□□□□□ -1.41
SMC4-214ENST00000472991 GTSF1LQ9H1H1 148 aa6.23□□□□□ -1.41
SMC4-214ENST00000472991 A0A1B0GXF2 115 aa6.22□□□□□ -1.41
SMC4-214ENST00000472991 M0R2N4 97 aa6.22□□□□□ -1.41
SMC4-214ENST00000472991 APOC3P02656 99 aa6.22□□□□□ -1.41
SMC4-214ENST00000472991 TIRAPP58753 221 aa6.22□□□□□ -1.41
SMC4-214ENST00000472991 HBBP68871 147 aa6.22□□□□□ -1.41
SMC4-214ENST00000472991 RASL11AQ6T310 242 aa6.22□□□□□ -1.41
SMC4-214ENST00000472991 WFDC10BQ8IUB3 73 aa6.22□□□□□ -1.41
SMC4-214ENST00000472991 AMN1Q8IY45 258 aa6.22□□□□□ -1.41
SMC4-214ENST00000472991 SLC7A5P1Q8MH63 180 aa6.22□□□□□ -1.41
SMC4-214ENST00000472991 GATD1Q8NB37 220 aa6.22□□□□□ -1.41
SMC4-214ENST00000472991 CLRN3Q8NCR9 226 aa6.22□□□□□ -1.41
SMC4-214ENST00000472991 CTDSP1Q9GZU7 261 aa6.22□□□□□ -1.41
SMC4-214ENST00000472991 IGHV3-38A0A0C4DH36 116 aa6.21□□□□□ -1.42
SMC4-214ENST00000472991 A0A1B0GW15 77 aa6.21□□□□□ -1.42
SMC4-214ENST00000472991 C7orf77A4D0Y5 90 aa6.21□□□□□ -1.42
SMC4-214ENST00000472991 SIVA1O15304 175 aa6.21□□□□□ -1.42
SMC4-214ENST00000472991 NDUFA5Q16718 116 aa6.21□□□□□ -1.42
SMC4-214ENST00000472991 RNF151Q2KHN1 245 aa6.21□□□□□ -1.42
SMC4-214ENST00000472991 OR10J3Q5JRS4 329 aa6.21□□□□□ -1.42
SMC4-214ENST00000472991 LELP1Q5T871 98 aa6.21□□□□□ -1.42
SMC4-214ENST00000472991 RPL39LQ96EH5 51 aaKnown RBP6.21□□□□□ -1.42
SMC4-214ENST00000472991 RNF185Q96GF1 192 aa6.21□□□□□ -1.42
SMC4-214ENST00000472991 DNAJC30Q96LL9 226 aa6.21□□□□□ -1.42
SMC4-214ENST00000472991 Q9H8V8 135 aa6.21□□□□□ -1.42
SMC4-214ENST00000472991 RPS10P5Q9NQ39 176 aa6.21□□□□□ -1.42
SMC4-214ENST00000472991 NIT2Q9NQR4 276 aa6.21□□□□□ -1.42
SMC4-214ENST00000472991 TNFRSF18Q9Y5U5 241 aa6.21□□□□□ -1.42
SMC4-214ENST00000472991 NBDYA0A0U1RRE5 68 aa6.2□□□□□ -1.42
SMC4-214ENST00000472991 GAS8-AS1O95177 125 aa6.2□□□□□ -1.42
SMC4-214ENST00000472991 NCR2O95944 276 aa6.2□□□□□ -1.42
SMC4-214ENST00000472991 S100A8P05109 93 aa6.2□□□□□ -1.42
SMC4-214ENST00000472991 RAB4AP20338 218 aa6.2□□□□□ -1.42
SMC4-214ENST00000472991 RHEBQ15382 184 aa6.2□□□□□ -1.42
SMC4-214ENST00000472991 FAM104BQ5XKR9 115 aa6.2□□□□□ -1.42
SMC4-214ENST00000472991 ATP5L2Q7Z4Y8 100 aa6.2□□□□□ -1.42
SMC4-214ENST00000472991 A0A087WWC5 75 aa6.19□□□□□ -1.42
SMC4-214ENST00000472991 TRAV8-6A0A0B4J262 113 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms