RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 LINC01587Q99440 93 aa5.61□□□□□ -1.51
CCDC171-205ENST00000472806 SPATA25Q9BR10 227 aa5.61□□□□□ -1.51
CCDC171-205ENST00000472806 CHAC1Q9BUX1 264 aa5.61□□□□□ -1.51
CCDC171-205ENST00000472806 E9PLD3 99 aa5.6□□□□□ -1.51
CCDC171-205ENST00000472806 NDUFA7O95182 113 aa5.6□□□□□ -1.51
CCDC171-205ENST00000472806 SMIM13P0DJ93 91 aa5.6□□□□□ -1.51
CCDC171-205ENST00000472806 CRYBA4P53673 196 aa5.6□□□□□ -1.51
CCDC171-205ENST00000472806 OR4C5Q8NGB2 326 aa5.6□□□□□ -1.51
CCDC171-205ENST00000472806 JPT2Q9H910 190 aa5.6□□□□□ -1.51
CCDC171-205ENST00000472806 TNFRSF18Q9Y5U5 241 aa5.6□□□□□ -1.51
CCDC171-205ENST00000472806 IGSF10Q6WRI0 2623 aa5.6□□□□□ -1.51
CCDC171-205ENST00000472806 SPTAN1Q13813 2472 aaKnown RBP5.59□□□□□ -1.51
CCDC171-205ENST00000472806 TRBV25-1A0A075B6N4 114 aa5.59□□□□□ -1.51
CCDC171-205ENST00000472806 IGKV2D-26A0A0A0MRZ7 120 aa5.59□□□□□ -1.51
CCDC171-205ENST00000472806 TRAV8-6A0A0B4J262 113 aa5.59□□□□□ -1.51
CCDC171-205ENST00000472806 MYMXA0A1B0GTQ4 84 aa5.59□□□□□ -1.51
CCDC171-205ENST00000472806 C9orf118A6NHY6 69 aa5.59□□□□□ -1.51
CCDC171-205ENST00000472806 IGIPA6NJ69 53 aa5.59□□□□□ -1.51
CCDC171-205ENST00000472806 FAM110AQ9BQ89 295 aa5.59□□□□□ -1.51
CCDC171-205ENST00000472806 TP73-AS1Q9UF72 201 aa5.59□□□□□ -1.51
CCDC171-205ENST00000472806 USP9XQ93008 2570 aaPredicted RBP5.58□□□□□ -1.52
CCDC171-205ENST00000472806 RBMY1BA6NDE4 496 aaKnown RBP5.58□□□□□ -1.52
CCDC171-205ENST00000472806 RBMY1EA6NEQ0 496 aaKnown RBP5.58□□□□□ -1.52
CCDC171-205ENST00000472806 C11orf86A6NJI1 115 aa5.58□□□□□ -1.52
CCDC171-205ENST00000472806 RBMY1DP0C7P1 496 aaKnown RBP5.58□□□□□ -1.52
CCDC171-205ENST00000472806 CD28P10747 220 aa5.58□□□□□ -1.52
CCDC171-205ENST00000472806 HTN1P15515 57 aa5.58□□□□□ -1.52
CCDC171-205ENST00000472806 GCSHP23434 173 aa5.58□□□□□ -1.52
CCDC171-205ENST00000472806 TCTAP57738 103 aa5.58□□□□□ -1.52
CCDC171-205ENST00000472806 HILS1P60008 231 aa5.58□□□□□ -1.52
CCDC171-205ENST00000472806 SMAGPQ0VAQ4 97 aa5.58□□□□□ -1.52
CCDC171-205ENST00000472806 CEND1Q8N111 149 aa5.58□□□□□ -1.52
CCDC171-205ENST00000472806 C20orf203Q8NBC4 194 aa5.58□□□□□ -1.52
CCDC171-205ENST00000472806 LINC01006Q8NI28 216 aa5.58□□□□□ -1.52
CCDC171-205ENST00000472806 TM2D2Q9BX73 214 aa5.58□□□□□ -1.52
CCDC171-205ENST00000472806 CST9LQ9H4G1 147 aa5.58□□□□□ -1.52
CCDC171-205ENST00000472806 ESM1Q9NQ30 184 aa5.58□□□□□ -1.52
CCDC171-205ENST00000472806 PYGO1Q9Y3Y4 419 aa5.58□□□□□ -1.52
CCDC171-205ENST00000472806 SPG11Q96JI7 2443 aa5.57□□□□□ -1.52
CCDC171-205ENST00000472806 ANKRD17O75179 2603 aaKnown RBP5.57□□□□□ -1.52
CCDC171-205ENST00000472806 USP24Q9UPU5 2620 aa5.57□□□□□ -1.52
CCDC171-205ENST00000472806 A0A1W2PRX2 142 aa5.57□□□□□ -1.52
CCDC171-205ENST00000472806 GAGE10A6NGK3 116 aa5.57□□□□□ -1.52
CCDC171-205ENST00000472806 RS1O15537 224 aa5.57□□□□□ -1.52
CCDC171-205ENST00000472806 CIDEAO60543 219 aa5.57□□□□□ -1.52
CCDC171-205ENST00000472806 TSHBP01222 138 aa5.57□□□□□ -1.52
CCDC171-205ENST00000472806 RBMY1A1P0DJD3 496 aaKnown RBP5.57□□□□□ -1.52
CCDC171-205ENST00000472806 RBMY1CP0DJD4 496 aa5.57□□□□□ -1.52
CCDC171-205ENST00000472806 KRTAP1-1Q07627 177 aa5.57□□□□□ -1.52
CCDC171-205ENST00000472806 RBMY1FQ15415 496 aaKnown RBP5.57□□□□□ -1.52
CCDC171-205ENST00000472806 BEAN1Q3B7T3 259 aa5.57□□□□□ -1.52
CCDC171-205ENST00000472806 MORN3Q6PF18 240 aaPredicted RBP5.57□□□□□ -1.52
CCDC171-205ENST00000472806 NEGR1Q7Z3B1 354 aa5.57□□□□□ -1.52
CCDC171-205ENST00000472806 HIST1H4GQ99525 98 aa5.57□□□□□ -1.52
CCDC171-205ENST00000472806 CITED2Q99967 270 aaPredicted RBP5.57□□□□□ -1.52
CCDC171-205ENST00000472806 PRADC1Q9BSG0 188 aa5.57□□□□□ -1.52
CCDC171-205ENST00000472806 C1QTNF4Q9BXJ3 329 aa5.57□□□□□ -1.52
CCDC171-205ENST00000472806 SPANXA1Q9NS26 97 aa5.57□□□□□ -1.52
CCDC171-205ENST00000472806 ZNF462Q96JM2 2506 aa5.56□□□□□ -1.52
CCDC171-205ENST00000472806 CSPG4Q6UVK1 2322 aa5.56□□□□□ -1.52
CCDC171-205ENST00000472806 ZNF815PA8K554 130 aa5.56□□□□□ -1.52
CCDC171-205ENST00000472806 CCL25O15444 150 aa5.56□□□□□ -1.52
CCDC171-205ENST00000472806 SAP30O75446 220 aa5.56□□□□□ -1.52
CCDC171-205ENST00000472806 IGHV3-53P01767 116 aa5.56□□□□□ -1.52
CCDC171-205ENST00000472806 FABP2P12104 132 aa5.56□□□□□ -1.52
CCDC171-205ENST00000472806 ODF3L2Q3SX64 289 aa5.56□□□□□ -1.52
CCDC171-205ENST00000472806 AMMECR1LQ6DCA0 310 aa5.56□□□□□ -1.52
CCDC171-205ENST00000472806 UFSP1Q6NVU6 142 aa5.56□□□□□ -1.52
CCDC171-205ENST00000472806 SCGB1D4Q6XE38 83 aa5.56□□□□□ -1.52
CCDC171-205ENST00000472806 NFE4Q86UQ8 179 aa5.56□□□□□ -1.52
CCDC171-205ENST00000472806 OR5A1Q8NGJ0 315 aa5.56□□□□□ -1.52
CCDC171-205ENST00000472806 VCX2Q9H322 139 aa5.56□□□□□ -1.52
CCDC171-205ENST00000472806 MUC4Q99102 2169 aa5.56□□□□□ -1.52
CCDC171-205ENST00000472806 IGLV4-69A0A075B6H9 119 aa5.55□□□□□ -1.52
CCDC171-205ENST00000472806 LGALS3P17931 250 aaKnown RBP5.55□□□□□ -1.52
CCDC171-205ENST00000472806 RPL39P62891 51 aaKnown RBP5.55□□□□□ -1.52
CCDC171-205ENST00000472806 COTL1Q14019 142 aa5.55□□□□□ -1.52
CCDC171-205ENST00000472806 TMEM170BQ5T4T1 132 aa5.55□□□□□ -1.52
CCDC171-205ENST00000472806 CFAP126Q5VTH2 177 aa5.55□□□□□ -1.52
CCDC171-205ENST00000472806 C11orf72Q8NBR9 251 aa5.55□□□□□ -1.52
CCDC171-205ENST00000472806 PLEKHB2Q96CS7 222 aa5.55□□□□□ -1.52
CCDC171-205ENST00000472806 FAM208BQ5VWN6 2430 aa5.54□□□□□ -1.52
CCDC171-205ENST00000472806 TACC2O95359 2948 aa5.54□□□□□ -1.52
CCDC171-205ENST00000472806 TRBV10-1A0A0K0K1A3 114 aa5.54□□□□□ -1.52
CCDC171-205ENST00000472806 A0A1W2PPM0 123 aa5.54□□□□□ -1.52
CCDC171-205ENST00000472806 H3BUT2 72 aa5.54□□□□□ -1.52
CCDC171-205ENST00000472806 K7EP13 123 aa5.54□□□□□ -1.52
CCDC171-205ENST00000472806 K7EP34 96 aa5.54□□□□□ -1.52
CCDC171-205ENST00000472806 LEPROTO15243 131 aa5.54□□□□□ -1.52
CCDC171-205ENST00000472806 IGLV1-51P01701 117 aa5.54□□□□□ -1.52
CCDC171-205ENST00000472806 AZU1P20160 251 aa5.54□□□□□ -1.52
CCDC171-205ENST00000472806 Q6ZVH6 145 aa5.54□□□□□ -1.52
CCDC171-205ENST00000472806 NDUFA11Q86Y39 141 aa5.54□□□□□ -1.52
CCDC171-205ENST00000472806 MAPKAPK5-AS1Q8N8E1 139 aa5.54□□□□□ -1.52
CCDC171-205ENST00000472806 C11orf44Q8N8P7 122 aa5.54□□□□□ -1.52
CCDC171-205ENST00000472806 TMEM263Q8WUH6 116 aaKnown RBP5.54□□□□□ -1.52
CCDC171-205ENST00000472806 C16orf74Q96GX8 76 aa5.54□□□□□ -1.52
CCDC171-205ENST00000472806 XCL2Q9UBD3 114 aa5.54□□□□□ -1.52
CCDC171-205ENST00000472806 CFAP46Q8IYW2 2715 aa5.54□□□□□ -1.52
CCDC171-205ENST00000472806 UBR5O95071 2799 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms