RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 CFAP126Q5VTH2 177 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 Q6ZTI0 123 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 BAGE3Q86Y29 109 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 POM121L12Q8N7R1 296 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 HIST1H2BHQ93079 126 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 RNF185Q96GF1 192 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 C18orf15Q96N68 181 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 HIST1H2BNQ99877 126 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 HIST1H2BMQ99879 126 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 FRAS1Q86XX4 4008 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 NDUFA6P56556 154 aa7.48□□□□□ -1.21
SMARCD3-208ENST00000472789 PRSS3P2Q8NHM4 247 aa7.48□□□□□ -1.21
SMARCD3-208ENST00000472789 MAP1LC3AQ9H492 121 aa7.48□□□□□ -1.21
SMARCD3-208ENST00000472789 JPT2Q9H910 190 aa7.48□□□□□ -1.21
SMARCD3-208ENST00000472789 MUC4Q99102 2169 aa7.47□□□□□ -1.21
SMARCD3-208ENST00000472789 HERC2O95714 4834 aa7.47□□□□□ -1.21
SMARCD3-208ENST00000472789 F5H768 121 aa7.47□□□□□ -1.21
SMARCD3-208ENST00000472789 TNFRSF6BO95407 300 aa7.47□□□□□ -1.21
SMARCD3-208ENST00000472789 C20orf78Q9BR46 151 aa7.47□□□□□ -1.21
SMARCD3-208ENST00000472789 TRGV4A0A0C4DH28 118 aa7.46□□□□□ -1.22
SMARCD3-208ENST00000472789 IGHV3-53P01767 116 aa7.46□□□□□ -1.22
SMARCD3-208ENST00000472789 ATP5G1P05496 136 aa7.46□□□□□ -1.22
SMARCD3-208ENST00000472789 PMCHP20382 165 aa7.46□□□□□ -1.22
SMARCD3-208ENST00000472789 LINC00315P59091 139 aa7.46□□□□□ -1.22
SMARCD3-208ENST00000472789 SUMO4Q6EEV6 95 aa7.46□□□□□ -1.22
SMARCD3-208ENST00000472789 LINC00612Q8N6U2 182 aa7.46□□□□□ -1.22
SMARCD3-208ENST00000472789 C18orf32Q8TCD1 76 aa7.46□□□□□ -1.22
SMARCD3-208ENST00000472789 DNAJC30Q96LL9 226 aa7.46□□□□□ -1.22
SMARCD3-208ENST00000472789 SAMD10Q9BYL1 202 aa7.46□□□□□ -1.22
SMARCD3-208ENST00000472789 ST20Q9HBF5 79 aa7.46□□□□□ -1.22
SMARCD3-208ENST00000472789 NXT2Q9NPJ8 142 aaKnown RBP7.46□□□□□ -1.22
SMARCD3-208ENST00000472789 NIT2Q9NQR4 276 aa7.46□□□□□ -1.22
SMARCD3-208ENST00000472789 IGHV3-73A0A0B4J1V6 119 aa7.45□□□□□ -1.22
SMARCD3-208ENST00000472789 TRBV10-1A0A0K0K1A3 114 aa7.45□□□□□ -1.22
SMARCD3-208ENST00000472789 PRSS47A8MTI9 375 aa7.45□□□□□ -1.22
SMARCD3-208ENST00000472789 K7EMI3 77 aa7.45□□□□□ -1.22
SMARCD3-208ENST00000472789 M0QY20 66 aa7.45□□□□□ -1.22
SMARCD3-208ENST00000472789 TCAPO15273 167 aa7.45□□□□□ -1.22
SMARCD3-208ENST00000472789 G0S2P27469 103 aa7.45□□□□□ -1.22
SMARCD3-208ENST00000472789 COA6Q5JTJ3 125 aaKnown RBP7.45□□□□□ -1.22
SMARCD3-208ENST00000472789 UFSP1Q6NVU6 142 aa7.45□□□□□ -1.22
SMARCD3-208ENST00000472789 FA2HQ7L5A8 372 aa7.45□□□□□ -1.22
SMARCD3-208ENST00000472789 CHCHD1Q96BP2 118 aaKnown RBP7.45□□□□□ -1.22
SMARCD3-208ENST00000472789 PRADC1Q9BSG0 188 aa7.45□□□□□ -1.22
SMARCD3-208ENST00000472789 TNFRSF18Q9Y5U5 241 aa7.45□□□□□ -1.22
SMARCD3-208ENST00000472789 TRAV26-2A0A0B4J265 109 aa7.44□□□□□ -1.22
SMARCD3-208ENST00000472789 TRBV6-5A0A0K0K1A5 114 aa7.44□□□□□ -1.22
SMARCD3-208ENST00000472789 TRBV6-4A0A1B0GX49 114 aa7.44□□□□□ -1.22
SMARCD3-208ENST00000472789 SMKR1H3BMG3 65 aa7.44□□□□□ -1.22
SMARCD3-208ENST00000472789 VCYO14598 125 aa7.44□□□□□ -1.22
SMARCD3-208ENST00000472789 NCR2O95944 276 aa7.44□□□□□ -1.22
SMARCD3-208ENST00000472789 NPYP01303 97 aa7.44□□□□□ -1.22
SMARCD3-208ENST00000472789 LINC00614P0C842 121 aa7.44□□□□□ -1.22
SMARCD3-208ENST00000472789 S100A2P29034 98 aa7.44□□□□□ -1.22
SMARCD3-208ENST00000472789 SUMO2P61956 95 aaKnown RBP7.44□□□□□ -1.22
SMARCD3-208ENST00000472789 ZNF479Q96JC4 524 aa7.44□□□□□ -1.22
SMARCD3-208ENST00000472789 KIR2DL4Q99706 377 aa7.44□□□□□ -1.22
SMARCD3-208ENST00000472789 RYR1P21817 5038 aa7.44□□□□□ -1.22
SMARCD3-208ENST00000472789 ALMS1Q8TCU4 4167 aa7.44□□□□□ -1.22
SMARCD3-208ENST00000472789 LOC389332A0A1B0GUA5 103 aa7.43□□□□□ -1.22
SMARCD3-208ENST00000472789 HSBP1O75506 76 aa7.43□□□□□ -1.22
SMARCD3-208ENST00000472789 RPL32P62910 135 aaKnown RBP7.43□□□□□ -1.22
SMARCD3-208ENST00000472789 RPL36AP83881 106 aaKnown RBP7.43□□□□□ -1.22
SMARCD3-208ENST00000472789 RHOHQ15669 191 aa7.43□□□□□ -1.22
SMARCD3-208ENST00000472789 NIT1Q86X76 327 aa7.43□□□□□ -1.22
SMARCD3-208ENST00000472789 NRACQ8N912 160 aa7.43□□□□□ -1.22
SMARCD3-208ENST00000472789 RPL36ALQ969Q0 106 aaKnown RBP7.43□□□□□ -1.22
SMARCD3-208ENST00000472789 AP5S1Q9NUS5 200 aa7.43□□□□□ -1.22
SMARCD3-208ENST00000472789 HHLA3Q9XRX5 114 aa7.43□□□□□ -1.22
SMARCD3-208ENST00000472789 K7EQD1 137 aa7.42□□□□□ -1.22
SMARCD3-208ENST00000472789 LY6G6CO95867 125 aa7.42□□□□□ -1.22
SMARCD3-208ENST00000472789 GATA1P15976 413 aaPredicted RBP7.42□□□□□ -1.22
SMARCD3-208ENST00000472789 SNRPEP62304 92 aaKnown RBP7.42□□□□□ -1.22
SMARCD3-208ENST00000472789 RNASEKQ6P5S7 137 aaKnown RBP7.42□□□□□ -1.22
SMARCD3-208ENST00000472789 Q8N8P6 123 aa7.42□□□□□ -1.22
SMARCD3-208ENST00000472789 PRO0255Q9UI72 69 aa7.42□□□□□ -1.22
SMARCD3-208ENST00000472789 APLNQ9ULZ1 77 aa7.42□□□□□ -1.22
SMARCD3-208ENST00000472789 TRBV7-3A0A075B6L6 115 aa7.41□□□□□ -1.22
SMARCD3-208ENST00000472789 A0A0J9YY99 117 aa7.41□□□□□ -1.22
SMARCD3-208ENST00000472789 SDHAF1A6NFY7 115 aa7.41□□□□□ -1.22
SMARCD3-208ENST00000472789 C5orf52A6NGY3 159 aa7.41□□□□□ -1.22
SMARCD3-208ENST00000472789 LINC01549A6NIU2 74 aa7.41□□□□□ -1.22
SMARCD3-208ENST00000472789 SERF1AO75920 110 aa7.41□□□□□ -1.22
SMARCD3-208ENST00000472789 NUDT3O95989 172 aa7.41□□□□□ -1.22
SMARCD3-208ENST00000472789 ESDP10768 282 aa7.41□□□□□ -1.22
SMARCD3-208ENST00000472789 HOXA5P20719 270 aa7.41□□□□□ -1.22
SMARCD3-208ENST00000472789 IFI27P40305 119 aaPredicted RBP7.41□□□□□ -1.22
SMARCD3-208ENST00000472789 TCTAP57738 103 aa7.41□□□□□ -1.22
SMARCD3-208ENST00000472789 FHL2Q14192 279 aa7.41□□□□□ -1.22
SMARCD3-208ENST00000472789 IQCJQ1A5X6 159 aa7.41□□□□□ -1.22
SMARCD3-208ENST00000472789 ORMDL2Q53FV1 153 aa7.41□□□□□ -1.22
SMARCD3-208ENST00000472789 TMEM18Q96B42 140 aa7.41□□□□□ -1.22
SMARCD3-208ENST00000472789 RPL39LQ96EH5 51 aaKnown RBP7.41□□□□□ -1.22
SMARCD3-208ENST00000472789 SMIM2Q9BVW6 85 aa7.41□□□□□ -1.22
SMARCD3-208ENST00000472789 PCLOQ9Y6V0 5065 aa7.41□□□□□ -1.22
SMARCD3-208ENST00000472789 TRAV26-1A0A087WT03 109 aa7.4□□□□□ -1.22
SMARCD3-208ENST00000472789 TRBV27A0A0K0K1C4 114 aa7.4□□□□□ -1.22
SMARCD3-208ENST00000472789 I3L3M4 83 aa7.4□□□□□ -1.22
SMARCD3-208ENST00000472789 FCER1GP30273 86 aa7.4□□□□□ -1.22
SMARCD3-208ENST00000472789 DAZ4Q86SG3 579 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms