RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 A0A096LPF7 62 aa7.4□□□□□ -1.22
UBE2F-220ENST00000472479 MT-ND6P03923 174 aa7.4□□□□□ -1.22
UBE2F-220ENST00000472479 SRIP30626 198 aa7.4□□□□□ -1.22
UBE2F-220ENST00000472479 MRPL23Q16540 153 aaKnown RBP7.4□□□□□ -1.22
UBE2F-220ENST00000472479 OR10J3Q5JRS4 329 aa7.4□□□□□ -1.22
UBE2F-220ENST00000472479 TMEM136Q6ZRR5 245 aa7.4□□□□□ -1.22
UBE2F-220ENST00000472479 MRAP2Q96G30 205 aa7.4□□□□□ -1.22
UBE2F-220ENST00000472479 MRPL18Q9H0U6 180 aaKnown RBP7.4□□□□□ -1.22
UBE2F-220ENST00000472479 LOC100131303A0A0U1RQF7 123 aa7.39□□□□□ -1.23
UBE2F-220ENST00000472479 SMKR1H3BMG3 65 aa7.39□□□□□ -1.23
UBE2F-220ENST00000472479 NCR2O95944 276 aa7.39□□□□□ -1.23
UBE2F-220ENST00000472479 PPP1R17O96001 155 aa7.39□□□□□ -1.23
UBE2F-220ENST00000472479 P0DMU3 169 aa7.39□□□□□ -1.23
UBE2F-220ENST00000472479 FAM231AP0DMU4 169 aa7.39□□□□□ -1.23
UBE2F-220ENST00000472479 FAM231CP0DMU5 169 aa7.39□□□□□ -1.23
UBE2F-220ENST00000472479 KIAA1644Q3SXP7 199 aa7.39□□□□□ -1.23
UBE2F-220ENST00000472479 UFSP1Q6NVU6 142 aa7.39□□□□□ -1.23
UBE2F-220ENST00000472479 GATD1Q8NB37 220 aa7.39□□□□□ -1.23
UBE2F-220ENST00000472479 NIT2Q9NQR4 276 aa7.39□□□□□ -1.23
UBE2F-220ENST00000472479 TRBV10-1A0A0K0K1A3 114 aa7.38□□□□□ -1.23
UBE2F-220ENST00000472479 D6R8Y8 96 aa7.38□□□□□ -1.23
UBE2F-220ENST00000472479 PPBPP02775 128 aa7.38□□□□□ -1.23
UBE2F-220ENST00000472479 LINC00315P59091 139 aa7.38□□□□□ -1.23
UBE2F-220ENST00000472479 ORMDL3Q8N138 153 aa7.38□□□□□ -1.23
UBE2F-220ENST00000472479 C15orf53Q8NAA6 179 aa7.38□□□□□ -1.23
UBE2F-220ENST00000472479 RNF185Q96GF1 192 aa7.38□□□□□ -1.23
UBE2F-220ENST00000472479 VSIG2Q96IQ7 327 aa7.38□□□□□ -1.23
UBE2F-220ENST00000472479 DNAJC30Q96LL9 226 aa7.38□□□□□ -1.23
UBE2F-220ENST00000472479 ST20Q9HBF5 79 aa7.38□□□□□ -1.23
UBE2F-220ENST00000472479 TRBV7-3A0A075B6L6 115 aa7.37□□□□□ -1.23
UBE2F-220ENST00000472479 M0QY20 66 aa7.37□□□□□ -1.23
UBE2F-220ENST00000472479 SH2D6Q7Z4S9 175 aa7.37□□□□□ -1.23
UBE2F-220ENST00000472479 ATP6V0E2Q8NHE4 81 aa7.37□□□□□ -1.23
UBE2F-220ENST00000472479 PRELID3AQ96N28 172 aa7.37□□□□□ -1.23
UBE2F-220ENST00000472479 COL7A1Q02388 2944 aa7.37□□□□□ -1.23
UBE2F-220ENST00000472479 H3BNG1 76 aa7.36□□□□□ -1.23
UBE2F-220ENST00000472479 C3orf84H3BNL1 204 aa7.36□□□□□ -1.23
UBE2F-220ENST00000472479 RAB5AP20339 215 aa7.36□□□□□ -1.23
UBE2F-220ENST00000472479 PMCHP20382 165 aa7.36□□□□□ -1.23
UBE2F-220ENST00000472479 NEGR1Q7Z3B1 354 aa7.36□□□□□ -1.23
UBE2F-220ENST00000472479 UBE2DNLQ8IWF7 75 aa7.36□□□□□ -1.23
UBE2F-220ENST00000472479 NEXN-AS1Q8NBZ9 246 aa7.36□□□□□ -1.23
UBE2F-220ENST00000472479 RPL39LQ96EH5 51 aaKnown RBP7.36□□□□□ -1.23
UBE2F-220ENST00000472479 IGHV3-38A0A0C4DH36 116 aa7.36□□□□□ -1.23
UBE2F-220ENST00000472479 LOC389332A0A1B0GUA5 103 aa7.36□□□□□ -1.23
UBE2F-220ENST00000472479 COLCA2A8K830 154 aa7.36□□□□□ -1.23
UBE2F-220ENST00000472479 TNFRSF6BO95407 300 aa7.36□□□□□ -1.23
UBE2F-220ENST00000472479 YPEL4Q96NS1 127 aa7.36□□□□□ -1.23
UBE2F-220ENST00000472479 STAB2Q8WWQ8 2551 aa7.35□□□□□ -1.23
UBE2F-220ENST00000472479 TGP01266 2768 aa7.35□□□□□ -1.23
UBE2F-220ENST00000472479 CCL18P55774 89 aa7.35□□□□□ -1.23
UBE2F-220ENST00000472479 TCTAP57738 103 aa7.35□□□□□ -1.23
UBE2F-220ENST00000472479 MAP1LC3AQ9H492 121 aa7.35□□□□□ -1.23
UBE2F-220ENST00000472479 Q9UF83 564 aa7.35□□□□□ -1.23
UBE2F-220ENST00000472479 NACAE9PAV3 2078 aa7.35□□□□□ -1.23
UBE2F-220ENST00000472479 SDHAF1A6NFY7 115 aa7.34□□□□□ -1.23
UBE2F-220ENST00000472479 GAS8-AS1O95177 125 aa7.34□□□□□ -1.23
UBE2F-220ENST00000472479 TRGC2P03986 189 aa7.34□□□□□ -1.23
UBE2F-220ENST00000472479 FCER1GP30273 86 aa7.34□□□□□ -1.23
UBE2F-220ENST00000472479 DEFB104AQ8WTQ1 72 aa7.34□□□□□ -1.23
UBE2F-220ENST00000472479 I3L3M4 83 aa7.33□□□□□ -1.24
UBE2F-220ENST00000472479 VCYO14598 125 aa7.33□□□□□ -1.24
UBE2F-220ENST00000472479 NPYP01303 97 aa7.33□□□□□ -1.24
UBE2F-220ENST00000472479 UBE2D3P61077 147 aa7.33□□□□□ -1.24
UBE2F-220ENST00000472479 SUMO2P61956 95 aaKnown RBP7.33□□□□□ -1.24
UBE2F-220ENST00000472479 UBE2D2P62837 147 aa7.33□□□□□ -1.24
UBE2F-220ENST00000472479 COTL1Q14019 142 aa7.33□□□□□ -1.24
UBE2F-220ENST00000472479 DAZ4Q86SG3 579 aaKnown RBP7.33□□□□□ -1.24
UBE2F-220ENST00000472479 PRSS3P2Q8NHM4 247 aa7.33□□□□□ -1.24
UBE2F-220ENST00000472479 C20orf78Q9BR46 151 aa7.33□□□□□ -1.24
UBE2F-220ENST00000472479 GTSF1LQ9H1H1 148 aa7.33□□□□□ -1.24
UBE2F-220ENST00000472479 DAZ3Q9NR90 486 aaKnown RBP7.33□□□□□ -1.24
UBE2F-220ENST00000472479 APLNQ9ULZ1 77 aa7.33□□□□□ -1.24
UBE2F-220ENST00000472479 LAMTOR2Q9Y2Q5 125 aa7.33□□□□□ -1.24
UBE2F-220ENST00000472479 PHOX2AO14813 284 aa7.32□□□□□ -1.24
UBE2F-220ENST00000472479 TMEM97Q5BJF2 176 aa7.32□□□□□ -1.24
UBE2F-220ENST00000472479 CASC10Q5T4H9 136 aa7.32□□□□□ -1.24
UBE2F-220ENST00000472479 NRACQ8N912 160 aa7.32□□□□□ -1.24
UBE2F-220ENST00000472479 KIR2DL4Q99706 377 aa7.32□□□□□ -1.24
UBE2F-220ENST00000472479 TRAV8-6A0A0B4J262 113 aa7.31□□□□□ -1.24
UBE2F-220ENST00000472479 TRBV6-5A0A0K0K1A5 114 aa7.31□□□□□ -1.24
UBE2F-220ENST00000472479 TMEM262E9PQX1 116 aa7.31□□□□□ -1.24
UBE2F-220ENST00000472479 LYPD5Q6UWN5 251 aa7.31□□□□□ -1.24
UBE2F-220ENST00000472479 ALKBH7Q9BT30 221 aaPredicted RBP7.31□□□□□ -1.24
UBE2F-220ENST00000472479 TMEM70Q9BUB7 260 aa7.31□□□□□ -1.24
UBE2F-220ENST00000472479 UBE2L6O14933 153 aa7.3□□□□□ -1.24
UBE2F-220ENST00000472479 AMTP48728 403 aa7.3□□□□□ -1.24
UBE2F-220ENST00000472479 ESRGQ1W209 222 aa7.3□□□□□ -1.24
UBE2F-220ENST00000472479 FA2HQ7L5A8 372 aa7.3□□□□□ -1.24
UBE2F-220ENST00000472479 BAGE3Q86Y29 109 aa7.3□□□□□ -1.24
UBE2F-220ENST00000472479 CHCHD5Q9BSY4 110 aa7.3□□□□□ -1.24
UBE2F-220ENST00000472479 TRBV25-1A0A075B6N4 114 aa7.3□□□□□ -1.24
UBE2F-220ENST00000472479 IGHV1-24A0A0C4DH33 117 aa7.3□□□□□ -1.24
UBE2F-220ENST00000472479 C1orf196B1AJZ1 125 aa7.3□□□□□ -1.24
UBE2F-220ENST00000472479 TCAPO15273 167 aa7.3□□□□□ -1.24
UBE2F-220ENST00000472479 SMIM2Q9BVW6 85 aa7.3□□□□□ -1.24
UBE2F-220ENST00000472479 NXT2Q9NPJ8 142 aaKnown RBP7.3□□□□□ -1.24
UBE2F-220ENST00000472479 LY6G6CO95867 125 aa7.29□□□□□ -1.24
UBE2F-220ENST00000472479 POLR2KP53803 58 aaKnown RBP7.29□□□□□ -1.24
UBE2F-220ENST00000472479 RAB5BP61020 215 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms