RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 A0A096LPF7 62 aa4.64□□□□□ -1.67
SCN9A-206ENST00000472119 LCE6AA0A183 80 aa4.64□□□□□ -1.67
SCN9A-206ENST00000472119 XKRY2A2RUG3 117 aa4.64□□□□□ -1.67
SCN9A-206ENST00000472119 A8MWV9 139 aa4.64□□□□□ -1.67
SCN9A-206ENST00000472119 IGLC6P0CF74 106 aa4.64□□□□□ -1.67
SCN9A-206ENST00000472119 GATA1P15976 413 aaPredicted RBP4.64□□□□□ -1.67
SCN9A-206ENST00000472119 FAM74A4Q5TZK3 123 aa4.64□□□□□ -1.67
SCN9A-206ENST00000472119 SPANXN1Q5VSR9 72 aa4.64□□□□□ -1.67
SCN9A-206ENST00000472119 LGALS9CQ6DKI2 356 aa4.64□□□□□ -1.67
SCN9A-206ENST00000472119 FAM231DQ6ZW35 169 aa4.64□□□□□ -1.67
SCN9A-206ENST00000472119 COMMD7Q86VX2 200 aa4.64□□□□□ -1.67
SCN9A-206ENST00000472119 C15orf53Q8NAA6 179 aa4.64□□□□□ -1.67
SCN9A-206ENST00000472119 GTSF1Q8WW33 167 aa4.64□□□□□ -1.67
SCN9A-206ENST00000472119 ISOC2Q96AB3 205 aa4.64□□□□□ -1.67
SCN9A-206ENST00000472119 SFRP2Q96HF1 295 aa4.64□□□□□ -1.67
SCN9A-206ENST00000472119 URB1-AS1Q96HZ7 61 aa4.64□□□□□ -1.67
SCN9A-206ENST00000472119 OSTCQ9NRP0 149 aa4.64□□□□□ -1.67
SCN9A-206ENST00000472119 PRO0255Q9UI72 69 aa4.64□□□□□ -1.67
SCN9A-206ENST00000472119 NACAE9PAV3 2078 aa4.64□□□□□ -1.67
SCN9A-206ENST00000472119 LOC100131303A0A0U1RQF7 123 aa4.63□□□□□ -1.67
SCN9A-206ENST00000472119 A0A1W2PPQ1 181 aa4.63□□□□□ -1.67
SCN9A-206ENST00000472119 A8MWL6 223 aa4.63□□□□□ -1.67
SCN9A-206ENST00000472119 NXPH4O95158 308 aa4.63□□□□□ -1.67
SCN9A-206ENST00000472119 CRYGDP07320 174 aa4.63□□□□□ -1.67
SCN9A-206ENST00000472119 SLAQ13239 276 aa4.63□□□□□ -1.67
SCN9A-206ENST00000472119 UFSP1Q6NVU6 142 aa4.63□□□□□ -1.67
SCN9A-206ENST00000472119 C14orf178Q8N769 122 aaPredicted RBP4.63□□□□□ -1.67
SCN9A-206ENST00000472119 C15orf54Q8N8G6 183 aa4.63□□□□□ -1.67
SCN9A-206ENST00000472119 SLC25A29Q8N8R3 303 aa4.63□□□□□ -1.67
SCN9A-206ENST00000472119 OR10G8Q8NGN5 311 aa4.63□□□□□ -1.67
SCN9A-206ENST00000472119 PGLYRP4Q96LB8 373 aa4.63□□□□□ -1.67
SCN9A-206ENST00000472119 ALMS1Q8TCU4 4167 aa4.63□□□□□ -1.67
SCN9A-206ENST00000472119 TMEM218A2RU14 115 aa4.62□□□□□ -1.67
SCN9A-206ENST00000472119 LINC00862A6NCI5 91 aa4.62□□□□□ -1.67
SCN9A-206ENST00000472119 F2Z2F3 143 aa4.62□□□□□ -1.67
SCN9A-206ENST00000472119 H3BNG1 76 aa4.62□□□□□ -1.67
SCN9A-206ENST00000472119 K7EQD1 137 aa4.62□□□□□ -1.67
SCN9A-206ENST00000472119 CIDEAO60543 219 aa4.62□□□□□ -1.67
SCN9A-206ENST00000472119 P0DMU3 169 aa4.62□□□□□ -1.67
SCN9A-206ENST00000472119 FAM231AP0DMU4 169 aa4.62□□□□□ -1.67
SCN9A-206ENST00000472119 FAM231CP0DMU5 169 aa4.62□□□□□ -1.67
SCN9A-206ENST00000472119 NTF3P20783 257 aa4.62□□□□□ -1.67
SCN9A-206ENST00000472119 CTRLP40313 264 aa4.62□□□□□ -1.67
SCN9A-206ENST00000472119 CACNG7P62955 275 aa4.62□□□□□ -1.67
SCN9A-206ENST00000472119 ESRGQ1W209 222 aa4.62□□□□□ -1.67
SCN9A-206ENST00000472119 UQCC3Q6UW78 93 aa4.62□□□□□ -1.67
SCN9A-206ENST00000472119 ZFP2Q6ZN57 461 aa4.62□□□□□ -1.67
SCN9A-206ENST00000472119 UBE2DNLQ8IWF7 75 aa4.62□□□□□ -1.67
SCN9A-206ENST00000472119 TSKUQ8WUA8 353 aa4.62□□□□□ -1.67
SCN9A-206ENST00000472119 Q9UF83 564 aa4.62□□□□□ -1.67
SCN9A-206ENST00000472119 ICOSQ9Y6W8 199 aa4.62□□□□□ -1.67
SCN9A-206ENST00000472119 V9GYV3 84 aa4.62□□□□□ -1.67
SCN9A-206ENST00000472119 VPS13DQ5THJ4 4388 aa4.62□□□□□ -1.67
SCN9A-206ENST00000472119 SACSQ9NZJ4 4579 aa4.61□□□□□ -1.67
SCN9A-206ENST00000472119 TRBV6-4A0A1B0GX49 114 aa4.61□□□□□ -1.67
SCN9A-206ENST00000472119 HIGD1CA8MV81 97 aa4.61□□□□□ -1.67
SCN9A-206ENST00000472119 F8W036 122 aa4.61□□□□□ -1.67
SCN9A-206ENST00000472119 RHODO00212 210 aa4.61□□□□□ -1.67
SCN9A-206ENST00000472119 SMIM17P0DL12 118 aa4.61□□□□□ -1.67
SCN9A-206ENST00000472119 ADCYAP1P18509 176 aa4.61□□□□□ -1.67
SCN9A-206ENST00000472119 EVI2AP22794 236 aa4.61□□□□□ -1.67
SCN9A-206ENST00000472119 SRIP30626 198 aa4.61□□□□□ -1.67
SCN9A-206ENST00000472119 FOXA3P55318 350 aaPredicted RBP4.61□□□□□ -1.67
SCN9A-206ENST00000472119 CCL18P55774 89 aa4.61□□□□□ -1.67
SCN9A-206ENST00000472119 MRPL23Q16540 153 aaKnown RBP4.61□□□□□ -1.67
SCN9A-206ENST00000472119 AP1S3Q96PC3 154 aa4.61□□□□□ -1.67
SCN9A-206ENST00000472119 PRADC1Q9BSG0 188 aa4.61□□□□□ -1.67
SCN9A-206ENST00000472119 LINC00588Q9Y4M8 146 aa4.61□□□□□ -1.67
SCN9A-206ENST00000472119 KIF25-AS1Q9Y6Z4 181 aa4.61□□□□□ -1.67
SCN9A-206ENST00000472119 LYSTQ99698 3801 aa4.61□□□□□ -1.67
SCN9A-206ENST00000472119 KMT2CQ8NEZ4 4911 aaKnown RBP4.6□□□□□ -1.67
SCN9A-206ENST00000472119 GAGE12JA6NER3 117 aa4.6□□□□□ -1.67
SCN9A-206ENST00000472119 MGPP08493 103 aa4.6□□□□□ -1.67
SCN9A-206ENST00000472119 LINC00315P59091 139 aa4.6□□□□□ -1.67
SCN9A-206ENST00000472119 RAB4BP61018 213 aa4.6□□□□□ -1.67
SCN9A-206ENST00000472119 GAGE1Q13065 139 aa4.6□□□□□ -1.67
SCN9A-206ENST00000472119 GAGE4Q13068 117 aa4.6□□□□□ -1.67
SCN9A-206ENST00000472119 GAGE5Q13069 117 aa4.6□□□□□ -1.67
SCN9A-206ENST00000472119 RHOHQ15669 191 aa4.6□□□□□ -1.67
SCN9A-206ENST00000472119 ZNF56Q15929 161 aa4.6□□□□□ -1.67
SCN9A-206ENST00000472119 RNF212Q495C1 297 aa4.6□□□□□ -1.67
SCN9A-206ENST00000472119 WDR73Q6P4I2 378 aa4.6□□□□□ -1.67
SCN9A-206ENST00000472119 LYPD5Q6UWN5 251 aa4.6□□□□□ -1.67
SCN9A-206ENST00000472119 NEGR1Q7Z3B1 354 aa4.6□□□□□ -1.67
SCN9A-206ENST00000472119 NUP35Q8NFH5 326 aa4.6□□□□□ -1.67
SCN9A-206ENST00000472119 CNFNQ9BYD5 112 aa4.6□□□□□ -1.67
SCN9A-206ENST00000472119 GFRA4Q9GZZ7 299 aa4.6□□□□□ -1.67
SCN9A-206ENST00000472119 IGLV2-18A0A075B6J9 118 aa4.59□□□□□ -1.67
SCN9A-206ENST00000472119 A0A1B0GUT8 65 aa4.59□□□□□ -1.67
SCN9A-206ENST00000472119 FAM231BA6NCW3 169 aa4.59□□□□□ -1.67
SCN9A-206ENST00000472119 M0R2N4 97 aa4.59□□□□□ -1.67
SCN9A-206ENST00000472119 TRGC1P0CF51 173 aa4.59□□□□□ -1.67
SCN9A-206ENST00000472119 PNRC1Q12796 327 aaPredicted RBP4.59□□□□□ -1.67
SCN9A-206ENST00000472119 ZNRF2Q8NHG8 242 aa4.59□□□□□ -1.67
SCN9A-206ENST00000472119 BORCS7Q96B45 105 aa4.59□□□□□ -1.67
SCN9A-206ENST00000472119 NAT8BQ9UHF3 227 aa4.59□□□□□ -1.67
SCN9A-206ENST00000472119 SMIM27A0A1W2PRY6 76 aa4.58□□□□□ -1.68
SCN9A-206ENST00000472119 PRYO14603 147 aa4.58□□□□□ -1.68
SCN9A-206ENST00000472119 MT-ND4LP03901 98 aa4.58□□□□□ -1.68
SCN9A-206ENST00000472119 FAM3BP58499 235 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms