RNA–Protein interactions for RNA: ENST00000471563.5

GCOM1-206, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,275 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-206ENST00000471563 J3KRW8 73 aa11.33□□□□□ -0.6
GCOM1-206ENST00000471563 OVOL1O14753 267 aa11.33□□□□□ -0.6
GCOM1-206ENST00000471563 LY6G6DO95868 133 aa11.33□□□□□ -0.6
GCOM1-206ENST00000471563 OR10J6PQ8NGY7 276 aa11.33□□□□□ -0.6
GCOM1-206ENST00000471563 MRPL16Q9NX20 251 aaKnown RBP11.33□□□□□ -0.6
GCOM1-206ENST00000471563 SPRY2O43597 315 aa11.32□□□□□ -0.6
GCOM1-206ENST00000471563 PPP1R17O96001 155 aa11.32□□□□□ -0.6
GCOM1-206ENST00000471563 MGPP08493 103 aa11.32□□□□□ -0.6
GCOM1-206ENST00000471563 INSL3P51460 131 aa11.32□□□□□ -0.6
GCOM1-206ENST00000471563 UBE2D1P51668 147 aa11.32□□□□□ -0.6
GCOM1-206ENST00000471563 ATP6V0E2Q8NHE4 81 aa11.32□□□□□ -0.6
GCOM1-206ENST00000471563 ANXA2RQ3ZCQ2 193 aa11.32□□□□□ -0.6
GCOM1-206ENST00000471563 DLX4Q92988 240 aaPredicted RBP11.32□□□□□ -0.6
GCOM1-206ENST00000471563 SORL1Q92673 2214 aa11.31□□□□□ -0.6
GCOM1-206ENST00000471563 LGALS9O00182 355 aa11.31□□□□□ -0.6
GCOM1-206ENST00000471563 APOMO95445 188 aa11.31□□□□□ -0.6
GCOM1-206ENST00000471563 CFAP126Q5VTH2 177 aa11.31□□□□□ -0.6
GCOM1-206ENST00000471563 SCGB1D4Q6XE38 83 aa11.31□□□□□ -0.6
GCOM1-206ENST00000471563 POM121L12Q8N7R1 296 aa11.31□□□□□ -0.6
GCOM1-206ENST00000471563 KLHL30-AS1Q8NEE0 82 aa11.31□□□□□ -0.6
GCOM1-206ENST00000471563 PLEKHB2Q96CS7 222 aa11.31□□□□□ -0.6
GCOM1-206ENST00000471563 C1QTNF4Q9BXJ3 329 aa11.31□□□□□ -0.6
GCOM1-206ENST00000471563 C4orf3Q8WVX3 66 aa11.3□□□□□ -0.6
GCOM1-206ENST00000471563 FAM19A4Q96LR4 140 aa11.3□□□□□ -0.6
GCOM1-206ENST00000471563 A0A1B0GV72 72 aa11.3□□□□□ -0.6
GCOM1-206ENST00000471563 A0A1W2PRX2 142 aa11.3□□□□□ -0.6
GCOM1-206ENST00000471563 LINC01549A6NIU2 74 aa11.3□□□□□ -0.6
GCOM1-206ENST00000471563 RNASE1P07998 156 aaKnown RBP11.3□□□□□ -0.6
GCOM1-206ENST00000471563 NXPH4O95158 308 aa11.29□□□□□ -0.6
GCOM1-206ENST00000471563 TSPAN13O95857 204 aa11.29□□□□□ -0.6
GCOM1-206ENST00000471563 SMCPP49901 116 aaPredicted RBP11.29□□□□□ -0.6
GCOM1-206ENST00000471563 RPL32P62910 135 aaKnown RBP11.29□□□□□ -0.6
GCOM1-206ENST00000471563 APRG1Q8IVJ8 170 aa11.29□□□□□ -0.6
GCOM1-206ENST00000471563 LINC01006Q8NI28 216 aa11.29□□□□□ -0.6
GCOM1-206ENST00000471563 CRYGDP07320 174 aa11.29□□□□□ -0.6
GCOM1-206ENST00000471563 ZNF688P0C7X2 276 aa11.29□□□□□ -0.6
GCOM1-206ENST00000471563 CD28P10747 220 aa11.29□□□□□ -0.6
GCOM1-206ENST00000471563 FOXI1Q12951 378 aa11.29□□□□□ -0.6
GCOM1-206ENST00000471563 SRSF9Q13242 221 aaKnown RBP eCLIP11.29□□□□□ -0.6
GCOM1-206ENST00000471563 WFDC12Q8WWY7 111 aa11.29□□□□□ -0.6
GCOM1-206ENST00000471563 DUSP14O95147 198 aaKnown RBP11.28□□□□□ -0.6
GCOM1-206ENST00000471563 RNASE4P34096 147 aaKnown RBP11.28□□□□□ -0.6
GCOM1-206ENST00000471563 SETXQ7Z333 2677 aaKnown RBP11.28□□□□□ -0.6
GCOM1-206ENST00000471563 IGLV4-69A0A075B6H9 119 aa11.28□□□□□ -0.6
GCOM1-206ENST00000471563 CD7P09564 240 aa11.28□□□□□ -0.6
GCOM1-206ENST00000471563 RNASE3P12724 160 aaKnown RBP11.28□□□□□ -0.6
GCOM1-206ENST00000471563 UBE2D3P61077 147 aa11.28□□□□□ -0.6
GCOM1-206ENST00000471563 HERVK_113P61574 105 aa11.28□□□□□ -0.6
GCOM1-206ENST00000471563 UBE2D2P62837 147 aa11.28□□□□□ -0.6
GCOM1-206ENST00000471563 PAPPA-AS1Q5QFB9 102 aa11.28□□□□□ -0.6
GCOM1-206ENST00000471563 HIVEP1P15822 2718 aa11.28□□□□□ -0.6
GCOM1-206ENST00000471563 WNK1Q9H4A3 2382 aa11.27□□□□□ -0.61
GCOM1-206ENST00000471563 C11orf86A6NJI1 115 aa11.27□□□□□ -0.61
GCOM1-206ENST00000471563 HILS1P60008 231 aa11.27□□□□□ -0.61
GCOM1-206ENST00000471563 LYRM7Q5U5X0 104 aa11.27□□□□□ -0.61
GCOM1-206ENST00000471563 ZNF418Q8TF45 676 aaPredicted RBP11.27□□□□□ -0.61
GCOM1-206ENST00000471563 TRBV7-9A0A0J9YWB2 115 aa11.26□□□□□ -0.61
GCOM1-206ENST00000471563 GNRH2O43555 120 aa11.26□□□□□ -0.61
GCOM1-206ENST00000471563 TSHBP01222 138 aa11.26□□□□□ -0.61
GCOM1-206ENST00000471563 PSMB2P49721 201 aa11.26□□□□□ -0.61
GCOM1-206ENST00000471563 TP53TG1Q9Y2A0 90 aa11.26□□□□□ -0.61
GCOM1-206ENST00000471563 KIF25-AS1Q9Y6Z4 181 aa11.26□□□□□ -0.61
GCOM1-206ENST00000471563 NIPBLQ6KC79 2804 aaeCLIP11.26□□□□□ -0.61
GCOM1-206ENST00000471563 LOC107984156A0A0G2JMH3 177 aa11.25□□□□□ -0.61
GCOM1-206ENST00000471563 A0A0J9YY99 117 aa11.25□□□□□ -0.61
GCOM1-206ENST00000471563 IGIPA6NJ69 53 aa11.25□□□□□ -0.61
GCOM1-206ENST00000471563 K7EQG2 157 aa11.25□□□□□ -0.61
GCOM1-206ENST00000471563 ID1P41134 155 aa11.25□□□□□ -0.61
GCOM1-206ENST00000471563 LINC00315P59091 139 aa11.25□□□□□ -0.61
GCOM1-206ENST00000471563 ARL17AQ8IVW1 177 aa11.25□□□□□ -0.61
GCOM1-206ENST00000471563 RAX2Q96IS3 184 aa11.25□□□□□ -0.61
GCOM1-206ENST00000471563 CITED2Q99967 270 aaPredicted RBP11.25□□□□□ -0.61
GCOM1-206ENST00000471563 FLNBO75369 2602 aaKnown RBP11.25□□□□□ -0.61
GCOM1-206ENST00000471563 INAFM1C9JVW0 142 aa11.25□□□□□ -0.61
GCOM1-206ENST00000471563 PMVKQ15126 192 aa11.25□□□□□ -0.61
GCOM1-206ENST00000471563 TMEM141Q96I45 108 aa11.25□□□□□ -0.61
GCOM1-206ENST00000471563 ZFP2Q6ZN57 461 aa11.24□□□□□ -0.61
GCOM1-206ENST00000471563 NFE4Q86UQ8 179 aa11.24□□□□□ -0.61
GCOM1-206ENST00000471563 NDUFA11Q86Y39 141 aa11.24□□□□□ -0.61
GCOM1-206ENST00000471563 CDIP1Q9H305 208 aa11.24□□□□□ -0.61
GCOM1-206ENST00000471563 SYT8Q8NBV8 401 aa11.24□□□□□ -0.61
GCOM1-206ENST00000471563 NSD1Q96L73 2696 aaPredicted RBP11.24□□□□□ -0.61
GCOM1-206ENST00000471563 FN1P02751 2386 aaKnown RBP11.23□□□□□ -0.61
GCOM1-206ENST00000471563 IGKV3-20P01619 116 aa11.23□□□□□ -0.61
GCOM1-206ENST00000471563 POLR2KP53803 58 aaKnown RBP11.23□□□□□ -0.61
GCOM1-206ENST00000471563 C16orf95Q9H693 158 aa11.23□□□□□ -0.61
GCOM1-206ENST00000471563 SNRPD3P62318 126 aaKnown RBP11.23□□□□□ -0.61
GCOM1-206ENST00000471563 TIMM17AQ99595 171 aa11.23□□□□□ -0.61
GCOM1-206ENST00000471563 IGHV3-30P01768 117 aa11.22□□□□□ -0.61
GCOM1-206ENST00000471563 IGHV3-30-5P0DP03 117 aa11.22□□□□□ -0.61
GCOM1-206ENST00000471563 EMP1P54849 157 aa11.22□□□□□ -0.61
GCOM1-206ENST00000471563 CKS1BP61024 79 aa11.22□□□□□ -0.61
GCOM1-206ENST00000471563 SUMO4Q6EEV6 95 aa11.22□□□□□ -0.61
GCOM1-206ENST00000471563 SFTA2Q6UW10 78 aa11.22□□□□□ -0.61
GCOM1-206ENST00000471563 TMEM61Q8N0U2 210 aa11.22□□□□□ -0.61
GCOM1-206ENST00000471563 TRBV20-1A0A075B6N2 111 aa11.21□□□□□ -0.61
GCOM1-206ENST00000471563 VCYO14598 125 aa11.21□□□□□ -0.61
GCOM1-206ENST00000471563 TSPEAR-AS2P59090 65 aa11.21□□□□□ -0.61
GCOM1-206ENST00000471563 PPDPFLQ8WWR9 84 aa11.21□□□□□ -0.61
GCOM1-206ENST00000471563 PEMTQ9UBM1 199 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms