RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 EPM2AB3EWF7 344 aa13.86□□□□□ -0.19
SREBF1-210ENST00000471445 TAGLN2P37802 199 aaKnown RBP13.86□□□□□ -0.19
SREBF1-210ENST00000471445 RMI2Q96E14 147 aa13.86□□□□□ -0.19
SREBF1-210ENST00000471445 DNAJC30Q96LL9 226 aa13.86□□□□□ -0.19
SREBF1-210ENST00000471445 TMEM70Q9BUB7 260 aa13.86□□□□□ -0.19
SREBF1-210ENST00000471445 F5H697 171 aa13.85□□□□□ -0.19
SREBF1-210ENST00000471445 SMIM17P0DL12 118 aa13.85□□□□□ -0.19
SREBF1-210ENST00000471445 SSTP61278 116 aa13.85□□□□□ -0.19
SREBF1-210ENST00000471445 ELOBQ15370 118 aa13.85□□□□□ -0.19
SREBF1-210ENST00000471445 P01737 135 aa13.84□□□□□ -0.19
SREBF1-210ENST00000471445 CACNG7P62955 275 aa13.84□□□□□ -0.19
SREBF1-210ENST00000471445 KCNIP4Q6PIL6 250 aa13.84□□□□□ -0.19
SREBF1-210ENST00000471445 ATRAIDQ6UW56 229 aa13.84□□□□□ -0.19
SREBF1-210ENST00000471445 TPPP3Q9BW30 176 aa13.84□□□□□ -0.19
SREBF1-210ENST00000471445 BIN3Q9NQY0 253 aa13.84□□□□□ -0.19
SREBF1-210ENST00000471445 LECT2O14960 151 aa13.83□□□□□ -0.2
SREBF1-210ENST00000471445 UBE2WQ96B02 151 aa13.83□□□□□ -0.2
SREBF1-210ENST00000471445 IGKV2D-24A0A075B6R9 120 aa13.82□□□□□ -0.2
SREBF1-210ENST00000471445 XKRY2A2RUG3 117 aa13.82□□□□□ -0.2
SREBF1-210ENST00000471445 MPV17L2Q567V2 206 aa13.82□□□□□ -0.2
SREBF1-210ENST00000471445 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.82□□□□□ -0.2
SREBF1-210ENST00000471445 hCG_2014768A0A024R1R8 64 aa13.81□□□□□ -0.2
SREBF1-210ENST00000471445 MGPP08493 103 aa13.81□□□□□ -0.2
SREBF1-210ENST00000471445 TMEM97Q5BJF2 176 aa13.81□□□□□ -0.2
SREBF1-210ENST00000471445 Q5VSD8 79 aa13.81□□□□□ -0.2
SREBF1-210ENST00000471445 BAALCQ8WXS3 180 aa13.81□□□□□ -0.2
SREBF1-210ENST00000471445 F2Z2F3 143 aa13.8□□□□□ -0.2
SREBF1-210ENST00000471445 M0QY20 66 aa13.8□□□□□ -0.2
SREBF1-210ENST00000471445 HAMPP81172 84 aa13.8□□□□□ -0.2
SREBF1-210ENST00000471445 Q0VG73 95 aa13.8□□□□□ -0.2
SREBF1-210ENST00000471445 NTM-AS1Q6ZSK4 140 aa13.8□□□□□ -0.2
SREBF1-210ENST00000471445 FRZBQ92765 325 aa13.8□□□□□ -0.2
SREBF1-210ENST00000471445 TMEM262E9PQX1 116 aa13.79□□□□□ -0.2
SREBF1-210ENST00000471445 CTRLP40313 264 aa13.79□□□□□ -0.2
SREBF1-210ENST00000471445 PKIAP61925 76 aa13.79□□□□□ -0.2
SREBF1-210ENST00000471445 SUMO4Q6EEV6 95 aa13.79□□□□□ -0.2
SREBF1-210ENST00000471445 ALKAL2Q6UX46 152 aa13.79□□□□□ -0.2
SREBF1-210ENST00000471445 NUDT10Q8NFP7 164 aa13.79□□□□□ -0.2
SREBF1-210ENST00000471445 NUDT11Q96G61 164 aa13.79□□□□□ -0.2
SREBF1-210ENST00000471445 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.78□□□□□ -0.2
SREBF1-210ENST00000471445 H7C1H1 209 aa13.78□□□□□ -0.2
SREBF1-210ENST00000471445 TRGC1P0CF51 173 aa13.78□□□□□ -0.2
SREBF1-210ENST00000471445 LYZL1Q6UWQ5 148 aa13.78□□□□□ -0.2
SREBF1-210ENST00000471445 ENHOQ6UWT2 76 aa13.78□□□□□ -0.2
SREBF1-210ENST00000471445 CHCHD5Q9BSY4 110 aa13.78□□□□□ -0.2
SREBF1-210ENST00000471445 FAM30AQ9NZY2 134 aa13.78□□□□□ -0.2
SREBF1-210ENST00000471445 K7EN84 100 aa13.77□□□□□ -0.21
SREBF1-210ENST00000471445 CRPP02741 224 aa13.77□□□□□ -0.21
SREBF1-210ENST00000471445 Q6ZSA8 131 aa13.77□□□□□ -0.21
SREBF1-210ENST00000471445 C15orf54Q8N8G6 183 aa13.77□□□□□ -0.21
SREBF1-210ENST00000471445 LYPD6BQ8NI32 183 aa13.77□□□□□ -0.21
SREBF1-210ENST00000471445 CNFNQ9BYD5 112 aa13.77□□□□□ -0.21
SREBF1-210ENST00000471445 RPP21Q9H633 154 aaKnown RBP13.77□□□□□ -0.21
SREBF1-210ENST00000471445 TRBV25-1A0A075B6N4 114 aa13.76□□□□□ -0.21
SREBF1-210ENST00000471445 BLOC1S1P78537 153 aa13.76□□□□□ -0.21
SREBF1-210ENST00000471445 Q8N976 141 aa13.76□□□□□ -0.21
SREBF1-210ENST00000471445 C1orf43Q9BWL3 253 aa13.76□□□□□ -0.21
SREBF1-210ENST00000471445 DPH3P1Q9H4G8 78 aa13.76□□□□□ -0.21
SREBF1-210ENST00000471445 TMEM250H0YL14 139 aa13.75□□□□□ -0.21
SREBF1-210ENST00000471445 SMR3BP02814 79 aaPredicted RBP13.75□□□□□ -0.21
SREBF1-210ENST00000471445 ANGP03950 147 aaKnown RBP13.75□□□□□ -0.21
SREBF1-210ENST00000471445 NTF3P20783 257 aa13.75□□□□□ -0.21
SREBF1-210ENST00000471445 IQCJQ1A5X6 159 aa13.75□□□□□ -0.21
SREBF1-210ENST00000471445 WDR73Q6P4I2 378 aa13.75□□□□□ -0.21
SREBF1-210ENST00000471445 OCC1Q8TAD7 63 aa13.75□□□□□ -0.21
SREBF1-210ENST00000471445 RNASE7Q9H1E1 156 aaKnown RBP13.75□□□□□ -0.21
SREBF1-210ENST00000471445 VPS13BQ7Z7G8 4022 aa13.74□□□□□ -0.21
SREBF1-210ENST00000471445 RASL11AQ6T310 242 aa13.74□□□□□ -0.21
SREBF1-210ENST00000471445 RBX1P62877 108 aa13.73□□□□□ -0.21
SREBF1-210ENST00000471445 PRR34Q9NV39 138 aa13.73□□□□□ -0.21
SREBF1-210ENST00000471445 IGHV1-24A0A0C4DH33 117 aa13.72□□□□□ -0.21
SREBF1-210ENST00000471445 NKX2-5P52952 324 aaPredicted RBP13.72□□□□□ -0.21
SREBF1-210ENST00000471445 GAGE6Q13070 117 aa13.72□□□□□ -0.21
SREBF1-210ENST00000471445 MIAQ16674 131 aa13.72□□□□□ -0.21
SREBF1-210ENST00000471445 INAFM2P0DMQ5 153 aa13.71□□□□□ -0.21
SREBF1-210ENST00000471445 GTSF1Q8WW33 167 aa13.7□□□□□ -0.22
SREBF1-210ENST00000471445 PGLYRP4Q96LB8 373 aa13.7□□□□□ -0.22
SREBF1-210ENST00000471445 NIT2Q9NQR4 276 aa13.7□□□□□ -0.22
SREBF1-210ENST00000471445 HERC1Q15751 4861 aa13.7□□□□□ -0.22
SREBF1-210ENST00000471445 TWIST1Q15672 202 aa13.69□□□□□ -0.22
SREBF1-210ENST00000471445 LINC01620Q4KN68 170 aa13.69□□□□□ -0.22
SREBF1-210ENST00000471445 C14orf177Q52M58 125 aa13.69□□□□□ -0.22
SREBF1-210ENST00000471445 FAM231DQ6ZW35 169 aa13.69□□□□□ -0.22
SREBF1-210ENST00000471445 FAM229AH3BQW9 127 aa13.68□□□□□ -0.22
SREBF1-210ENST00000471445 NDUFS6O75380 124 aaKnown RBP13.68□□□□□ -0.22
SREBF1-210ENST00000471445 CLPSL2Q6UWE3 100 aa13.68□□□□□ -0.22
SREBF1-210ENST00000471445 HLA-DQA1P01909 254 aa13.67□□□□□ -0.22
SREBF1-210ENST00000471445 KRTAP26-1Q6PEX3 210 aa13.67□□□□□ -0.22
SREBF1-210ENST00000471445 LINC00269Q8N2A0 174 aa13.67□□□□□ -0.22
SREBF1-210ENST00000471445 TMEM243Q9BU79 118 aa13.67□□□□□ -0.22
SREBF1-210ENST00000471445 GATCO43716 136 aaKnown RBP13.66□□□□□ -0.22
SREBF1-210ENST00000471445 CT83Q5H943 113 aa13.66□□□□□ -0.22
SREBF1-210ENST00000471445 C20orf203Q8NBC4 194 aa13.66□□□□□ -0.22
SREBF1-210ENST00000471445 USP17L23D6RBM5 183 aa13.65□□□□□ -0.22
SREBF1-210ENST00000471445 GATD1Q8NB37 220 aa13.65□□□□□ -0.22
SREBF1-210ENST00000471445 TRAV26-2A0A0B4J265 109 aa13.64□□□□□ -0.23
SREBF1-210ENST00000471445 A0A1B0GUV1 79 aa13.64□□□□□ -0.23
SREBF1-210ENST00000471445 CEBPGP53567 150 aa13.64□□□□□ -0.23
SREBF1-210ENST00000471445 REG3AQ06141 175 aa13.64□□□□□ -0.23
SREBF1-210ENST00000471445 FAM210AQ96ND0 272 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms