RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 VCYO14598 125 aa18.58■□□□□ 0.57
U2AF1-208ENST00000471250 IGHV3-53P01767 116 aa18.58■□□□□ 0.57
U2AF1-208ENST00000471250 ORMDL2Q53FV1 153 aa18.58■□□□□ 0.57
U2AF1-208ENST00000471250 Q6ZSN1 163 aa18.58■□□□□ 0.57
U2AF1-208ENST00000471250 DEFB135Q30KP9 77 aa18.57■□□□□ 0.56
U2AF1-208ENST00000471250 MAP1LC3CQ9BXW4 147 aa18.57■□□□□ 0.56
U2AF1-208ENST00000471250 TRBV27A0A0K0K1C4 114 aa18.56■□□□□ 0.56
U2AF1-208ENST00000471250 A8MZ25 164 aa18.56■□□□□ 0.56
U2AF1-208ENST00000471250 G3V4G9 280 aa18.56■□□□□ 0.56
U2AF1-208ENST00000471250 CMYA5Q8N3K9 4069 aa18.55■□□□□ 0.56
U2AF1-208ENST00000471250 SYS1-DBNDD2H3BUS1 97 aa18.55■□□□□ 0.56
U2AF1-208ENST00000471250 NEGR1Q7Z3B1 354 aa18.55■□□□□ 0.56
U2AF1-208ENST00000471250 ZNF479Q96JC4 524 aa18.55■□□□□ 0.56
U2AF1-208ENST00000471250 GAGE12BA1L429 117 aa18.54■□□□□ 0.56
U2AF1-208ENST00000471250 GAGE7O76087 117 aa18.54■□□□□ 0.56
U2AF1-208ENST00000471250 GAGE12FP0CL80 117 aa18.54■□□□□ 0.56
U2AF1-208ENST00000471250 GAGE12GP0CL81 117 aa18.54■□□□□ 0.56
U2AF1-208ENST00000471250 GAGE12IP0CL82 117 aa18.54■□□□□ 0.56
U2AF1-208ENST00000471250 SAMD5Q5TGI4 173 aa18.54■□□□□ 0.56
U2AF1-208ENST00000471250 NUDT3O95989 172 aa18.54■□□□□ 0.56
U2AF1-208ENST00000471250 P0DMU3 169 aa18.54■□□□□ 0.56
U2AF1-208ENST00000471250 FAM231AP0DMU4 169 aa18.54■□□□□ 0.56
U2AF1-208ENST00000471250 FAM231CP0DMU5 169 aa18.54■□□□□ 0.56
U2AF1-208ENST00000471250 PET117Q6UWS5 81 aa18.53■□□□□ 0.56
U2AF1-208ENST00000471250 SPATA12Q7Z6I5 190 aa18.53■□□□□ 0.56
U2AF1-208ENST00000471250 KIR2DL4Q99706 377 aa18.53■□□□□ 0.56
U2AF1-208ENST00000471250 MDFIQ99750 246 aa18.53■□□□□ 0.56
U2AF1-208ENST00000471250 CIDEAO60543 219 aa18.52■□□□□ 0.56
U2AF1-208ENST00000471250 EMP1P54849 157 aa18.52■□□□□ 0.56
U2AF1-208ENST00000471250 OR11H2Q8NH07 326 aa18.52■□□□□ 0.56
U2AF1-208ENST00000471250 TRGV2A0A075B6R0 118 aa18.51■□□□□ 0.55
U2AF1-208ENST00000471250 S100A12P80511 92 aa18.51■□□□□ 0.55
U2AF1-208ENST00000471250 TEX43Q6ZNM6 134 aa18.51■□□□□ 0.55
U2AF1-208ENST00000471250 IFI27L1Q96BM0 104 aa18.51■□□□□ 0.55
U2AF1-208ENST00000471250 RNF183Q96D59 192 aa18.51■□□□□ 0.55
U2AF1-208ENST00000471250 DNAJC30Q96LL9 226 aa18.51■□□□□ 0.55
U2AF1-208ENST00000471250 LINC00612Q8N6U2 182 aa18.5■□□□□ 0.55
U2AF1-208ENST00000471250 NEXN-AS1Q8NBZ9 246 aa18.5■□□□□ 0.55
U2AF1-208ENST00000471250 TNFRSF18Q9Y5U5 241 aa18.5■□□□□ 0.55
U2AF1-208ENST00000471250 COL6A5A8TX70 2615 aa18.5■□□□□ 0.55
U2AF1-208ENST00000471250 I3L3M4 83 aa18.48■□□□□ 0.55
U2AF1-208ENST00000471250 TOMM6Q96B49 74 aa18.48■□□□□ 0.55
U2AF1-208ENST00000471250 Q9UF83 564 aa18.48■□□□□ 0.55
U2AF1-208ENST00000471250 MIFP14174 115 aa18.47■□□□□ 0.55
U2AF1-208ENST00000471250 C18orf15Q96N68 181 aa18.47■□□□□ 0.55
U2AF1-208ENST00000471250 C20orf202A1L168 122 aa18.47■□□□□ 0.55
U2AF1-208ENST00000471250 G0S2P27469 103 aa18.47■□□□□ 0.55
U2AF1-208ENST00000471250 ATP5LO75964 103 aa18.46■□□□□ 0.55
U2AF1-208ENST00000471250 TSHBP01222 138 aa18.46■□□□□ 0.55
U2AF1-208ENST00000471250 RHOHQ15669 191 aa18.46■□□□□ 0.55
U2AF1-208ENST00000471250 C2orf66Q6UXQ4 117 aa18.46■□□□□ 0.55
U2AF1-208ENST00000471250 IGHV4-28A0A0C4DH34 117 aa18.45■□□□□ 0.54
U2AF1-208ENST00000471250 H0Y8G0 127 aa18.45■□□□□ 0.54
U2AF1-208ENST00000471250 K7EQD1 137 aa18.45■□□□□ 0.54
U2AF1-208ENST00000471250 RIPPLY3P57055 190 aa18.45■□□□□ 0.54
U2AF1-208ENST00000471250 LINC01545Q5VT33 79 aa18.45■□□□□ 0.54
U2AF1-208ENST00000471250 TRBV10-1A0A0K0K1A3 114 aa18.44■□□□□ 0.54
U2AF1-208ENST00000471250 LYRM9A8MSI8 78 aa18.44■□□□□ 0.54
U2AF1-208ENST00000471250 Q8NAQ8 132 aa18.44■□□□□ 0.54
U2AF1-208ENST00000471250 DEFB104AQ8WTQ1 72 aa18.44■□□□□ 0.54
U2AF1-208ENST00000471250 LINC01549A6NIU2 74 aa18.43■□□□□ 0.54
U2AF1-208ENST00000471250 ZNF664Q8N3J9 261 aa18.43■□□□□ 0.54
U2AF1-208ENST00000471250 DEFB130BP0DP73 79 aa18.42■□□□□ 0.54
U2AF1-208ENST00000471250 DEFB130AP0DP74 79 aa18.42■□□□□ 0.54
U2AF1-208ENST00000471250 FAM222AQ5U5X8 452 aa18.42■□□□□ 0.54
U2AF1-208ENST00000471250 SLC25A29Q8N8R3 303 aa18.42■□□□□ 0.54
U2AF1-208ENST00000471250 CYSLTR1Q9Y271 337 aa18.42■□□□□ 0.54
U2AF1-208ENST00000471250 LGALS9CQ6DKI2 356 aa18.41■□□□□ 0.54
U2AF1-208ENST00000471250 SCGB3A1Q96QR1 104 aa18.41■□□□□ 0.54
U2AF1-208ENST00000471250 TRGV4A0A0C4DH28 118 aa18.41■□□□□ 0.54
U2AF1-208ENST00000471250 FHL2Q14192 279 aa18.41■□□□□ 0.54
U2AF1-208ENST00000471250 VAMP8Q9BV40 100 aa18.41■□□□□ 0.54
U2AF1-208ENST00000471250 TP53TG1Q9Y2A0 90 aa18.41■□□□□ 0.54
U2AF1-208ENST00000471250 ANK2Q01484 3957 aa18.4■□□□□ 0.54
U2AF1-208ENST00000471250 TRBV6-4A0A1B0GX49 114 aa18.4■□□□□ 0.54
U2AF1-208ENST00000471250 PCP4L1A6NKN8 68 aa18.4■□□□□ 0.54
U2AF1-208ENST00000471250 ATOH7Q8N100 152 aa18.4■□□□□ 0.54
U2AF1-208ENST00000471250 DKK2Q9UBU2 259 aa18.4■□□□□ 0.54
U2AF1-208ENST00000471250 TRBV7-3A0A075B6L6 115 aa18.39■□□□□ 0.53
U2AF1-208ENST00000471250 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.39■□□□□ 0.53
U2AF1-208ENST00000471250 DEFB4AO15263 64 aa18.39■□□□□ 0.53
U2AF1-208ENST00000471250 RPL36AP83881 106 aaKnown RBP18.39■□□□□ 0.53
U2AF1-208ENST00000471250 ZNRF2Q8NHG8 242 aa18.39■□□□□ 0.53
U2AF1-208ENST00000471250 RPL36ALQ969Q0 106 aaKnown RBP18.39■□□□□ 0.53
U2AF1-208ENST00000471250 PRSS1P07477 247 aa18.38■□□□□ 0.53
U2AF1-208ENST00000471250 PKIAP61925 76 aa18.38■□□□□ 0.53
U2AF1-208ENST00000471250 ERASQ7Z444 233 aa18.38■□□□□ 0.53
U2AF1-208ENST00000471250 PMCHL2Q9BQD1 86 aa18.38■□□□□ 0.53
U2AF1-208ENST00000471250 DNAH3Q8TD57 4116 aa18.37■□□□□ 0.53
U2AF1-208ENST00000471250 RPL39P62891 51 aaKnown RBP18.36■□□□□ 0.53
U2AF1-208ENST00000471250 C20orf203Q8NBC4 194 aa18.36■□□□□ 0.53
U2AF1-208ENST00000471250 PHLDA1Q8WV24 401 aaPredicted RBP18.36■□□□□ 0.53
U2AF1-208ENST00000471250 PRO1933Q9H354 126 aa18.36■□□□□ 0.53
U2AF1-208ENST00000471250 PAM16Q9Y3D7 125 aa18.36■□□□□ 0.53
U2AF1-208ENST00000471250 TRAV9-2A0A087WT02 112 aa18.35■□□□□ 0.53
U2AF1-208ENST00000471250 Q6ZN92 141 aa18.35■□□□□ 0.53
U2AF1-208ENST00000471250 ZMAT4Q9H898 229 aa18.35■□□□□ 0.53
U2AF1-208ENST00000471250 IGIPA6NJ69 53 aa18.34■□□□□ 0.53
U2AF1-208ENST00000471250 IGHV3-38A0A0C4DH36 116 aa18.34■□□□□ 0.53
U2AF1-208ENST00000471250 UBE2D3P61077 147 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms