RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 URGCP-MRPS24S4R325 110 aa4□□□□□ -1.77
VARS-222ENST00000470953 A0A1B0GV50 99 aa3.99□□□□□ -1.77
VARS-222ENST00000470953 A0A1W2PRE2 83 aa3.99□□□□□ -1.77
VARS-222ENST00000470953 GGTLC3B5MD39 225 aa3.99□□□□□ -1.77
VARS-222ENST00000470953 PEX7O00628 323 aa3.99□□□□□ -1.77
VARS-222ENST00000470953 BCL2L11O43521 198 aa3.99□□□□□ -1.77
VARS-222ENST00000470953 SPINK4O60575 86 aa3.99□□□□□ -1.77
VARS-222ENST00000470953 GCSHP23434 173 aa3.99□□□□□ -1.77
VARS-222ENST00000470953 S100A4P26447 101 aaKnown RBP3.99□□□□□ -1.77
VARS-222ENST00000470953 SRIP30626 198 aa3.99□□□□□ -1.77
VARS-222ENST00000470953 LINC00315P59091 139 aa3.99□□□□□ -1.77
VARS-222ENST00000470953 HERV-K104P63124 156 aa3.99□□□□□ -1.77
VARS-222ENST00000470953 NIT1Q86X76 327 aa3.99□□□□□ -1.77
VARS-222ENST00000470953 LINC00612Q8N6U2 182 aa3.99□□□□□ -1.77
VARS-222ENST00000470953 TMEM75Q8N9X5 138 aa3.99□□□□□ -1.77
VARS-222ENST00000470953 ISOC2Q96AB3 205 aa3.99□□□□□ -1.77
VARS-222ENST00000470953 C8orf49Q96NF6 230 aa3.99□□□□□ -1.77
VARS-222ENST00000470953 YPEL4Q96NS1 127 aa3.99□□□□□ -1.77
VARS-222ENST00000470953 HIST1H2BLQ99880 126 aa3.99□□□□□ -1.77
VARS-222ENST00000470953 PSG8Q9UQ74 426 aa3.99□□□□□ -1.77
VARS-222ENST00000470953 COX11Q9Y6N1 276 aa3.99□□□□□ -1.77
VARS-222ENST00000470953 A0A087WWC5 75 aa3.98□□□□□ -1.77
VARS-222ENST00000470953 UMAD1C9J7I0 102 aa3.98□□□□□ -1.77
VARS-222ENST00000470953 C9JCJ5 164 aa3.98□□□□□ -1.77
VARS-222ENST00000470953 M0R2P5 195 aa3.98□□□□□ -1.77
VARS-222ENST00000470953 TYMSP04818 313 aa3.98□□□□□ -1.77
VARS-222ENST00000470953 PFN1P07737 140 aaKnown RBP3.98□□□□□ -1.77
VARS-222ENST00000470953 TPT1P13693 172 aaKnown RBP3.98□□□□□ -1.77
VARS-222ENST00000470953 NDUFA6P56556 154 aa3.98□□□□□ -1.77
VARS-222ENST00000470953 Q6ZQT7 251 aa3.98□□□□□ -1.77
VARS-222ENST00000470953 Q86TA4 180 aa3.98□□□□□ -1.77
VARS-222ENST00000470953 KCNRGQ8N5I3 272 aa3.98□□□□□ -1.77
VARS-222ENST00000470953 ANAPC16Q96DE5 110 aa3.98□□□□□ -1.77
VARS-222ENST00000470953 MRAP2Q96G30 205 aa3.98□□□□□ -1.77
VARS-222ENST00000470953 SMDT1Q9H4I9 107 aa3.98□□□□□ -1.77
VARS-222ENST00000470953 GEMIN7Q9H840 131 aaKnown RBP3.98□□□□□ -1.77
VARS-222ENST00000470953 PRO0255Q9UI72 69 aa3.98□□□□□ -1.77
VARS-222ENST00000470953 EPDR1Q9UM22 224 aa3.98□□□□□ -1.77
VARS-222ENST00000470953 SYNE2Q8WXH0 6885 aaKnown RBP3.97□□□□□ -1.77
VARS-222ENST00000470953 A0A087WTM6 91 aa3.97□□□□□ -1.77
VARS-222ENST00000470953 A0A096LPF7 62 aa3.97□□□□□ -1.77
VARS-222ENST00000470953 TRAV4A0A0B4J268 109 aa3.97□□□□□ -1.77
VARS-222ENST00000470953 H3BNG1 76 aa3.97□□□□□ -1.77
VARS-222ENST00000470953 HIST1H2BKO60814 126 aa3.97□□□□□ -1.77
VARS-222ENST00000470953 ORM1P02763 201 aa3.97□□□□□ -1.77
VARS-222ENST00000470953 HIST1H2BJP06899 126 aa3.97□□□□□ -1.77
VARS-222ENST00000470953 SFTA3P0C7M3 94 aa3.97□□□□□ -1.77
VARS-222ENST00000470953 FABP4P15090 132 aa3.97□□□□□ -1.77
VARS-222ENST00000470953 HIST1H2BOP23527 126 aa3.97□□□□□ -1.77
VARS-222ENST00000470953 HIST1H2BBP33778 126 aa3.97□□□□□ -1.77
VARS-222ENST00000470953 HIST1H2BDP58876 126 aa3.97□□□□□ -1.77
VARS-222ENST00000470953 CKS1BP61024 79 aa3.97□□□□□ -1.77
VARS-222ENST00000470953 HIST1H2BCP62807 126 aa3.97□□□□□ -1.77
VARS-222ENST00000470953 ZNF726P1Q15940 193 aa3.97□□□□□ -1.77
VARS-222ENST00000470953 MRPL23Q16540 153 aaKnown RBP3.97□□□□□ -1.77
VARS-222ENST00000470953 HIST2H2BEQ16778 126 aa3.97□□□□□ -1.77
VARS-222ENST00000470953 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.97□□□□□ -1.77
VARS-222ENST00000470953 DPPA3Q6W0C5 159 aa3.97□□□□□ -1.77
VARS-222ENST00000470953 HIST1H2BHQ93079 126 aa3.97□□□□□ -1.77
VARS-222ENST00000470953 TMEM18Q96B42 140 aa3.97□□□□□ -1.77
VARS-222ENST00000470953 FMC1Q96HJ9 113 aa3.97□□□□□ -1.77
VARS-222ENST00000470953 HIST1H2BNQ99877 126 aa3.97□□□□□ -1.77
VARS-222ENST00000470953 HIST1H2BMQ99879 126 aa3.97□□□□□ -1.77
VARS-222ENST00000470953 TXNDC17Q9BRA2 123 aa3.97□□□□□ -1.77
VARS-222ENST00000470953 HHLA3Q9XRX5 114 aa3.97□□□□□ -1.77
VARS-222ENST00000470953 MRPS16Q9Y3D3 137 aaKnown RBP3.97□□□□□ -1.77
VARS-222ENST00000470953 ARL2-SNX15V9GYD0 113 aa3.97□□□□□ -1.77
VARS-222ENST00000470953 IGHV3-16A0A0C4DH30 117 aa3.96□□□□□ -1.78
VARS-222ENST00000470953 C7orf77A4D0Y5 90 aa3.96□□□□□ -1.78
VARS-222ENST00000470953 B4DEV8 164 aa3.96□□□□□ -1.78
VARS-222ENST00000470953 GNRH2O43555 120 aa3.96□□□□□ -1.78
VARS-222ENST00000470953 NXPH4O95158 308 aa3.96□□□□□ -1.78
VARS-222ENST00000470953 SEC11BP0C7V7 166 aa3.96□□□□□ -1.78
VARS-222ENST00000470953 GYPEP15421 78 aa3.96□□□□□ -1.78
VARS-222ENST00000470953 TDRG1Q3Y452 100 aa3.96□□□□□ -1.78
VARS-222ENST00000470953 ZNF876PQ49A33 203 aa3.96□□□□□ -1.78
VARS-222ENST00000470953 FAM162BQ5T6X4 162 aa3.96□□□□□ -1.78
VARS-222ENST00000470953 NEGR1Q7Z3B1 354 aa3.96□□□□□ -1.78
VARS-222ENST00000470953 DAZAP1Q96EP5 407 aaKnown RBP3.96□□□□□ -1.78
VARS-222ENST00000470953 TVP23CQ96ET8 276 aa3.96□□□□□ -1.78
VARS-222ENST00000470953 PRADC1Q9BSG0 188 aa3.96□□□□□ -1.78
VARS-222ENST00000470953 TMEM70Q9BUB7 260 aa3.96□□□□□ -1.78
VARS-222ENST00000470953 RPS10P5Q9NQ39 176 aa3.96□□□□□ -1.78
VARS-222ENST00000470953 CYTL1Q9NRR1 136 aa3.96□□□□□ -1.78
VARS-222ENST00000470953 NAT8Q9UHE5 227 aa3.96□□□□□ -1.78
VARS-222ENST00000470953 TMSB15BA0A087X1C1 80 aa3.95□□□□□ -1.78
VARS-222ENST00000470953 IGHV3-73A0A0B4J1V6 119 aa3.95□□□□□ -1.78
VARS-222ENST00000470953 FABP5P3A8MUU1 101 aa3.95□□□□□ -1.78
VARS-222ENST00000470953 H3BVH4 76 aa3.95□□□□□ -1.78
VARS-222ENST00000470953 SIVA1O15304 175 aa3.95□□□□□ -1.78
VARS-222ENST00000470953 PDE6DO43924 150 aa3.95□□□□□ -1.78
VARS-222ENST00000470953 PAGE4O60829 102 aa3.95□□□□□ -1.78
VARS-222ENST00000470953 IFNA1P01562 189 aa3.95□□□□□ -1.78
VARS-222ENST00000470953 RPS10P46783 165 aaKnown RBP3.95□□□□□ -1.78
VARS-222ENST00000470953 ZNF80P51504 273 aaPredicted RBP3.95□□□□□ -1.78
VARS-222ENST00000470953 HNRNPA3P51991 378 aaKnown RBP3.95□□□□□ -1.78
VARS-222ENST00000470953 RHOHQ15669 191 aa3.95□□□□□ -1.78
VARS-222ENST00000470953 SH2D6Q7Z4S9 175 aa3.95□□□□□ -1.78
VARS-222ENST00000470953 RASL10AQ92737 203 aa3.95□□□□□ -1.78
VARS-222ENST00000470953 PTH2Q96A98 100 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms