RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 MEIG1Q5JSS6 88 aa10.32□□□□□ -0.76
NPHP4-207ENST00000470763 UBE2WQ96B02 151 aa10.32□□□□□ -0.76
NPHP4-207ENST00000470763 UNC79Q9P2D8 2635 aa10.32□□□□□ -0.76
NPHP4-207ENST00000470763 TRIAP1O43715 76 aa10.32□□□□□ -0.76
NPHP4-207ENST00000470763 CD3EP07766 207 aa10.32□□□□□ -0.76
NPHP4-207ENST00000470763 SDHAF1A6NFY7 115 aa10.32□□□□□ -0.76
NPHP4-207ENST00000470763 P0DMU3 169 aa10.32□□□□□ -0.76
NPHP4-207ENST00000470763 FAM231AP0DMU4 169 aa10.32□□□□□ -0.76
NPHP4-207ENST00000470763 FAM231CP0DMU5 169 aa10.32□□□□□ -0.76
NPHP4-207ENST00000470763 SUMO4Q6EEV6 95 aa10.32□□□□□ -0.76
NPHP4-207ENST00000470763 OR10J6PQ8NGY7 276 aa10.32□□□□□ -0.76
NPHP4-207ENST00000470763 TEX15Q9BXT5 2789 aa10.32□□□□□ -0.76
NPHP4-207ENST00000470763 M0QXV9 152 aa10.31□□□□□ -0.76
NPHP4-207ENST00000470763 LINC01560Q8TB33 94 aa10.31□□□□□ -0.76
NPHP4-207ENST00000470763 A0A0B4J2C4 111 aa10.31□□□□□ -0.76
NPHP4-207ENST00000470763 PPP1R17O96001 155 aa10.31□□□□□ -0.76
NPHP4-207ENST00000470763 POLR2KP53803 58 aaKnown RBP10.31□□□□□ -0.76
NPHP4-207ENST00000470763 LINC00315P59091 139 aa10.31□□□□□ -0.76
NPHP4-207ENST00000470763 FAM74A4Q5TZK3 123 aa10.31□□□□□ -0.76
NPHP4-207ENST00000470763 C2orf82Q6UX34 121 aa10.31□□□□□ -0.76
NPHP4-207ENST00000470763 CHCHD5Q9BSY4 110 aa10.31□□□□□ -0.76
NPHP4-207ENST00000470763 PRRC2AP48634 2157 aaKnown RBP10.31□□□□□ -0.76
NPHP4-207ENST00000470763 RPL11P62913 178 aaKnown RBP10.3□□□□□ -0.76
NPHP4-207ENST00000470763 Q6Q795 121 aa10.3□□□□□ -0.76
NPHP4-207ENST00000470763 ITLN2Q8WWU7 325 aaPredicted RBP10.3□□□□□ -0.76
NPHP4-207ENST00000470763 TMEM141Q96I45 108 aa10.3□□□□□ -0.76
NPHP4-207ENST00000470763 TIMM17AQ99595 171 aa10.3□□□□□ -0.76
NPHP4-207ENST00000470763 LINC00527Q9UJ94 153 aa10.3□□□□□ -0.76
NPHP4-207ENST00000470763 CELSR1Q9NYQ6 3014 aa10.3□□□□□ -0.76
NPHP4-207ENST00000470763 ITPR2Q14571 2701 aa10.3□□□□□ -0.76
NPHP4-207ENST00000470763 TRBV10-2A0A0K0K1G8 114 aa10.3□□□□□ -0.76
NPHP4-207ENST00000470763 HRNRQ86YZ3 2850 aaPredicted RBP10.3□□□□□ -0.76
NPHP4-207ENST00000470763 LGALS9O00182 355 aa10.3□□□□□ -0.76
NPHP4-207ENST00000470763 ZNF56Q15929 161 aa10.3□□□□□ -0.76
NPHP4-207ENST00000470763 Q6ZSV7 163 aa10.3□□□□□ -0.76
NPHP4-207ENST00000470763 C9orf139Q6ZV77 190 aa10.3□□□□□ -0.76
NPHP4-207ENST00000470763 EEF1AKMT3Q96AZ1 226 aa10.3□□□□□ -0.76
NPHP4-207ENST00000470763 KIF25-AS1Q9Y6Z4 181 aa10.3□□□□□ -0.76
NPHP4-207ENST00000470763 VCYO14598 125 aa10.29□□□□□ -0.76
NPHP4-207ENST00000470763 RPL13AP40429 203 aaKnown RBP10.29□□□□□ -0.76
NPHP4-207ENST00000470763 NPC2P61916 151 aa10.29□□□□□ -0.76
NPHP4-207ENST00000470763 LINC00477Q96M19 166 aa10.29□□□□□ -0.76
NPHP4-207ENST00000470763 DUX3Q96PT4 197 aa10.29□□□□□ -0.76
NPHP4-207ENST00000470763 AKAP6Q13023 2319 aa10.29□□□□□ -0.76
NPHP4-207ENST00000470763 TMEM223A0PJW6 202 aa10.29□□□□□ -0.76
NPHP4-207ENST00000470763 LEPROTO15243 131 aa10.29□□□□□ -0.76
NPHP4-207ENST00000470763 PRSS2P07478 247 aa10.29□□□□□ -0.76
NPHP4-207ENST00000470763 LENEPQ9Y5L5 61 aa10.29□□□□□ -0.76
NPHP4-207ENST00000470763 TMEM95Q3KNT9 176 aa10.28□□□□□ -0.76
NPHP4-207ENST00000470763 U3KQE9 123 aa10.28□□□□□ -0.76
NPHP4-207ENST00000470763 M0R1W7 72 aa10.28□□□□□ -0.76
NPHP4-207ENST00000470763 UNQ9165/PRO28630Q6UXU0 137 aa10.28□□□□□ -0.76
NPHP4-207ENST00000470763 CLEC2BQ92478 149 aa10.28□□□□□ -0.76
NPHP4-207ENST00000470763 IGHV4OR15-8A0A075B7B6 117 aa10.27□□□□□ -0.77
NPHP4-207ENST00000470763 A0A087WW49 117 aa10.27□□□□□ -0.77
NPHP4-207ENST00000470763 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.27□□□□□ -0.77
NPHP4-207ENST00000470763 A0A0J9YXV3 536 aa10.27□□□□□ -0.77
NPHP4-207ENST00000470763 H7C423 109 aa10.27□□□□□ -0.77
NPHP4-207ENST00000470763 ZNF22P17026 224 aaPredicted RBP10.27□□□□□ -0.77
NPHP4-207ENST00000470763 EBI3Q14213 229 aa10.27□□□□□ -0.77
NPHP4-207ENST00000470763 UBE2E1P51965 193 aa10.27□□□□□ -0.77
NPHP4-207ENST00000470763 A0A0J9YXY3 114 aa10.26□□□□□ -0.77
NPHP4-207ENST00000470763 NOTCH2Q04721 2471 aa10.26□□□□□ -0.77
NPHP4-207ENST00000470763 TRBV30A0A0K0K1B3 111 aa10.26□□□□□ -0.77
NPHP4-207ENST00000470763 GRNP28799 593 aaKnown RBP10.26□□□□□ -0.77
NPHP4-207ENST00000470763 SPXQ9BT56 116 aa10.26□□□□□ -0.77
NPHP4-207ENST00000470763 M0R2P5 195 aa10.25□□□□□ -0.77
NPHP4-207ENST00000470763 TRBV12-3P01733 135 aa10.25□□□□□ -0.77
NPHP4-207ENST00000470763 ICOSQ9Y6W8 199 aa10.25□□□□□ -0.77
NPHP4-207ENST00000470763 HIST2H2BCQ6DN03 193 aa10.25□□□□□ -0.77
NPHP4-207ENST00000470763 MDFICQ9P1T7 246 aa10.25□□□□□ -0.77
NPHP4-207ENST00000470763 TRBV7-1A0A0A6YYK4 115 aa10.24□□□□□ -0.77
NPHP4-207ENST00000470763 OVOL1O14753 267 aa10.24□□□□□ -0.77
NPHP4-207ENST00000470763 MED14OSP0DP75 135 aa10.24□□□□□ -0.77
NPHP4-207ENST00000470763 POM121L12Q8N7R1 296 aa10.24□□□□□ -0.77
NPHP4-207ENST00000470763 CSMD2Q7Z408 3487 aa10.24□□□□□ -0.77
NPHP4-207ENST00000470763 TRAV8-3A0A0A6YYJ7 113 aa10.24□□□□□ -0.77
NPHP4-207ENST00000470763 TRBV27A0A0K0K1C4 114 aa10.24□□□□□ -0.77
NPHP4-207ENST00000470763 TNFRSF18Q9Y5U5 241 aa10.24□□□□□ -0.77
NPHP4-207ENST00000470763 ZFP36P26651 326 aaKnown RBP10.23□□□□□ -0.77
NPHP4-207ENST00000470763 ADAMTSL4-AS1Q5T5F5 129 aa10.23□□□□□ -0.77
NPHP4-207ENST00000470763 PPDPFQ9H3Y8 114 aa10.23□□□□□ -0.77
NPHP4-207ENST00000470763 SORL1Q92673 2214 aa10.23□□□□□ -0.77
NPHP4-207ENST00000470763 SOCS3O14543 225 aa10.22□□□□□ -0.77
NPHP4-207ENST00000470763 NXPH4O95158 308 aa10.22□□□□□ -0.77
NPHP4-207ENST00000470763 IGHV3-30-3P0DP02 117 aa10.22□□□□□ -0.77
NPHP4-207ENST00000470763 TMEM219Q86XT9 240 aa10.22□□□□□ -0.77
NPHP4-207ENST00000470763 ID1P41134 155 aa10.22□□□□□ -0.77
NPHP4-207ENST00000470763 TRAV12-3A0A0B4J271 114 aa10.22□□□□□ -0.77
NPHP4-207ENST00000470763 A8MZ25 164 aa10.22□□□□□ -0.77
NPHP4-207ENST00000470763 RNASE13Q5GAN3 156 aaKnown RBP10.22□□□□□ -0.77
NPHP4-207ENST00000470763 MINOS1Q5TGZ0 78 aa10.22□□□□□ -0.77
NPHP4-207ENST00000470763 MINOS1-NBL1R4GNA1 71 aa10.22□□□□□ -0.77
NPHP4-207ENST00000470763 OOSP1A8MZH6 123 aa10.21□□□□□ -0.77
NPHP4-207ENST00000470763 FAM19A4Q96LR4 140 aa10.21□□□□□ -0.77
NPHP4-207ENST00000470763 LITAFQ99732 161 aa10.21□□□□□ -0.77
NPHP4-207ENST00000470763 FBN2P35556 2912 aa10.21□□□□□ -0.78
NPHP4-207ENST00000470763 FAM236AA0A1B0GUQ0 79 aa10.2□□□□□ -0.78
NPHP4-207ENST00000470763 FAM236BA0A1B0GV22 79 aa10.2□□□□□ -0.78
NPHP4-207ENST00000470763 IGHV1-69P01742 117 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 168.2 ms