RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 PRSS3P2Q8NHM4 247 aa5.92□□□□□ -1.46
GTF3A-206ENST00000470606 CHCHD1Q96BP2 118 aaKnown RBP5.92□□□□□ -1.46
GTF3A-206ENST00000470606 AP5S1Q9NUS5 200 aa5.92□□□□□ -1.46
GTF3A-206ENST00000470606 IGHV4-28A0A0C4DH34 117 aa5.91□□□□□ -1.46
GTF3A-206ENST00000470606 TCAPO15273 167 aa5.91□□□□□ -1.46
GTF3A-206ENST00000470606 HSBP1O75506 76 aa5.91□□□□□ -1.46
GTF3A-206ENST00000470606 IGHV3-53P01767 116 aa5.91□□□□□ -1.46
GTF3A-206ENST00000470606 POLR2KP53803 58 aaKnown RBP5.91□□□□□ -1.46
GTF3A-206ENST00000470606 LINC00612Q8N6U2 182 aa5.91□□□□□ -1.46
GTF3A-206ENST00000470606 Q8N8P6 123 aa5.91□□□□□ -1.46
GTF3A-206ENST00000470606 TMEM18Q96B42 140 aa5.91□□□□□ -1.46
GTF3A-206ENST00000470606 TMEM70Q9BUB7 260 aa5.91□□□□□ -1.46
GTF3A-206ENST00000470606 SMIM2Q9BVW6 85 aa5.91□□□□□ -1.46
GTF3A-206ENST00000470606 MAP1LC3AQ9H492 121 aa5.91□□□□□ -1.46
GTF3A-206ENST00000470606 PRKDCP78527 4128 aaKnown RBP5.91□□□□□ -1.46
GTF3A-206ENST00000470606 SMIM9A6NGZ8 99 aa5.91□□□□□ -1.46
GTF3A-206ENST00000470606 SPATA12Q7Z6I5 190 aa5.91□□□□□ -1.46
GTF3A-206ENST00000470606 Q8N976 141 aa5.91□□□□□ -1.46
GTF3A-206ENST00000470606 EDA2RQ9HAV5 297 aa5.91□□□□□ -1.46
GTF3A-206ENST00000470606 CELA1Q9UNI1 258 aa5.91□□□□□ -1.46
GTF3A-206ENST00000470606 TRBV6-5A0A0K0K1A5 114 aa5.9□□□□□ -1.46
GTF3A-206ENST00000470606 KRTAP21-3Q3LHN1 58 aa5.9□□□□□ -1.46
GTF3A-206ENST00000470606 FAM222AQ5U5X8 452 aa5.9□□□□□ -1.46
GTF3A-206ENST00000470606 FA2HQ7L5A8 372 aa5.9□□□□□ -1.46
GTF3A-206ENST00000470606 OR4C5Q8NGB2 326 aa5.9□□□□□ -1.46
GTF3A-206ENST00000470606 C20orf78Q9BR46 151 aa5.9□□□□□ -1.46
GTF3A-206ENST00000470606 HUWE1Q7Z6Z7 4374 aaKnown RBP5.9□□□□□ -1.46
GTF3A-206ENST00000470606 TRAV4A0A0B4J268 109 aa5.89□□□□□ -1.47
GTF3A-206ENST00000470606 SDHAF1A6NFY7 115 aa5.89□□□□□ -1.47
GTF3A-206ENST00000470606 DEFB130BP0DP73 79 aa5.89□□□□□ -1.47
GTF3A-206ENST00000470606 DEFB130AP0DP74 79 aa5.89□□□□□ -1.47
GTF3A-206ENST00000470606 ZFP2Q6ZN57 461 aa5.89□□□□□ -1.47
GTF3A-206ENST00000470606 SBSPONQ8IVN8 264 aa5.89□□□□□ -1.47
GTF3A-206ENST00000470606 NEXN-AS1Q8NBZ9 246 aa5.89□□□□□ -1.47
GTF3A-206ENST00000470606 NDUFAF3Q9BU61 184 aa5.89□□□□□ -1.47
GTF3A-206ENST00000470606 NXT2Q9NPJ8 142 aaKnown RBP5.89□□□□□ -1.47
GTF3A-206ENST00000470606 NIT2Q9NQR4 276 aa5.89□□□□□ -1.47
GTF3A-206ENST00000470606 TRBV27A0A0K0K1C4 114 aa5.89□□□□□ -1.47
GTF3A-206ENST00000470606 C3orf79P0CE67 100 aa5.89□□□□□ -1.47
GTF3A-206ENST00000470606 FHL2Q14192 279 aa5.89□□□□□ -1.47
GTF3A-206ENST00000470606 LINC00518Q8N0U6 118 aa5.89□□□□□ -1.47
GTF3A-206ENST00000470606 SLC25A29Q8N8R3 303 aa5.89□□□□□ -1.47
GTF3A-206ENST00000470606 ST20Q9HBF5 79 aa5.89□□□□□ -1.47
GTF3A-206ENST00000470606 DKK2Q9UBU2 259 aa5.89□□□□□ -1.47
GTF3A-206ENST00000470606 TRGV2A0A075B6R0 118 aa5.88□□□□□ -1.47
GTF3A-206ENST00000470606 LOC100131303A0A0U1RQF7 123 aa5.88□□□□□ -1.47
GTF3A-206ENST00000470606 RHODO00212 210 aa5.88□□□□□ -1.47
GTF3A-206ENST00000470606 RPL32P62910 135 aaKnown RBP5.88□□□□□ -1.47
GTF3A-206ENST00000470606 JOSD1Q15040 202 aaPredicted RBP5.88□□□□□ -1.47
GTF3A-206ENST00000470606 TSHBP01222 138 aa5.87□□□□□ -1.47
GTF3A-206ENST00000470606 MIFP14174 115 aa5.87□□□□□ -1.47
GTF3A-206ENST00000470606 C18orf15Q96N68 181 aa5.87□□□□□ -1.47
GTF3A-206ENST00000470606 ZMAT5Q9UDW3 170 aaKnown RBP5.87□□□□□ -1.47
GTF3A-206ENST00000470606 LEPROTL1O95214 131 aa5.87□□□□□ -1.47
GTF3A-206ENST00000470606 PPP1R17O96001 155 aa5.87□□□□□ -1.47
GTF3A-206ENST00000470606 FCER1GP30273 86 aa5.87□□□□□ -1.47
GTF3A-206ENST00000470606 KRTDAPP60985 99 aa5.87□□□□□ -1.47
GTF3A-206ENST00000470606 LAGE3Q14657 143 aa5.87□□□□□ -1.47
GTF3A-206ENST00000470606 C12orf57Q99622 126 aa5.87□□□□□ -1.47
GTF3A-206ENST00000470606 DNAH9Q9NYC9 4486 aa5.87□□□□□ -1.47
GTF3A-206ENST00000470606 IGHV3-38A0A0C4DH36 116 aa5.86□□□□□ -1.47
GTF3A-206ENST00000470606 HBDP02042 147 aa5.86□□□□□ -1.47
GTF3A-206ENST00000470606 SMIM6P0DI80 62 aa5.86□□□□□ -1.47
GTF3A-206ENST00000470606 TP53TG1Q9Y2A0 90 aa5.86□□□□□ -1.47
GTF3A-206ENST00000470606 LYRM9A8MSI8 78 aa5.86□□□□□ -1.47
GTF3A-206ENST00000470606 K7EQD1 137 aa5.86□□□□□ -1.47
GTF3A-206ENST00000470606 VCYO14598 125 aa5.86□□□□□ -1.47
GTF3A-206ENST00000470606 RPL39P62891 51 aaKnown RBP5.86□□□□□ -1.47
GTF3A-206ENST00000470606 H7C1H1 209 aa5.85□□□□□ -1.47
GTF3A-206ENST00000470606 BTF3P20290 206 aaKnown RBP5.85□□□□□ -1.47
GTF3A-206ENST00000470606 ZNRF2Q8NHG8 242 aa5.85□□□□□ -1.47
GTF3A-206ENST00000470606 MRAPQ8TCY5 172 aa5.85□□□□□ -1.47
GTF3A-206ENST00000470606 PHLDA1Q8WV24 401 aaPredicted RBP5.85□□□□□ -1.47
GTF3A-206ENST00000470606 FAM104AQ969W3 186 aa5.85□□□□□ -1.47
GTF3A-206ENST00000470606 TRBV7-3A0A075B6L6 115 aa5.84□□□□□ -1.47
GTF3A-206ENST00000470606 TRBV6-4A0A1B0GX49 114 aa5.84□□□□□ -1.47
GTF3A-206ENST00000470606 SYS1-DBNDD2H3BUS1 97 aa5.84□□□□□ -1.47
GTF3A-206ENST00000470606 I3L3M4 83 aa5.84□□□□□ -1.47
GTF3A-206ENST00000470606 NUDT3O95989 172 aa5.84□□□□□ -1.47
GTF3A-206ENST00000470606 LINC00694P0DN24 101 aa5.84□□□□□ -1.47
GTF3A-206ENST00000470606 DEFB121Q5J5C9 76 aa5.84□□□□□ -1.47
GTF3A-206ENST00000470606 C2orf66Q6UXQ4 117 aa5.84□□□□□ -1.47
GTF3A-206ENST00000470606 PMCHL2Q9BQD1 86 aa5.84□□□□□ -1.47
GTF3A-206ENST00000470606 TM2D3Q9BRN9 247 aa5.84□□□□□ -1.47
GTF3A-206ENST00000470606 TNFRSF18Q9Y5U5 241 aa5.84□□□□□ -1.47
GTF3A-206ENST00000470606 TENM2Q9NT68 2774 aa5.84□□□□□ -1.48
GTF3A-206ENST00000470606 TRGV4A0A0C4DH28 118 aa5.84□□□□□ -1.48
GTF3A-206ENST00000470606 GAGE12JA6NER3 117 aa5.84□□□□□ -1.48
GTF3A-206ENST00000470606 SCGB1D1O95968 90 aa5.84□□□□□ -1.48
GTF3A-206ENST00000470606 UBE2D3P61077 147 aa5.84□□□□□ -1.48
GTF3A-206ENST00000470606 UBE2D2P62837 147 aa5.84□□□□□ -1.48
GTF3A-206ENST00000470606 GAGE1Q13065 139 aa5.84□□□□□ -1.48
GTF3A-206ENST00000470606 GAGE4Q13068 117 aa5.84□□□□□ -1.48
GTF3A-206ENST00000470606 GAGE5Q13069 117 aa5.84□□□□□ -1.48
GTF3A-206ENST00000470606 C12orf74Q32Q52 190 aa5.84□□□□□ -1.48
GTF3A-206ENST00000470606 GAGE13Q4V321 117 aa5.84□□□□□ -1.48
GTF3A-206ENST00000470606 NTM-AS1Q6ZSK4 140 aa5.84□□□□□ -1.48
GTF3A-206ENST00000470606 TOMM6Q96B49 74 aa5.84□□□□□ -1.48
GTF3A-206ENST00000470606 VSIG2Q96IQ7 327 aa5.84□□□□□ -1.48
GTF3A-206ENST00000470606 KIR2DL4Q99706 377 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms