RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 A4D1N5 150 aa9.79□□□□□ -0.84
SFXN3-205ENST00000470252 BRI3O95415 125 aa9.79□□□□□ -0.84
SFXN3-205ENST00000470252 DCANP1Q8TF63 244 aa9.79□□□□□ -0.84
SFXN3-205ENST00000470252 IGHV3-16A0A0C4DH30 117 aa9.78□□□□□ -0.84
SFXN3-205ENST00000470252 LEPROTO15243 131 aa9.78□□□□□ -0.84
SFXN3-205ENST00000470252 IGHV4-39P01824 125 aa9.78□□□□□ -0.84
SFXN3-205ENST00000470252 PRB1P04280 392 aa9.78□□□□□ -0.84
SFXN3-205ENST00000470252 C9orf85Q96MD7 179 aa9.78□□□□□ -0.84
SFXN3-205ENST00000470252 SS18L2Q9UHA2 77 aa9.78□□□□□ -0.84
SFXN3-205ENST00000470252 TRAV2A0A0B4J234 112 aa9.78□□□□□ -0.84
SFXN3-205ENST00000470252 TMEM223A0PJW6 202 aa9.78□□□□□ -0.84
SFXN3-205ENST00000470252 M0QY20 66 aa9.78□□□□□ -0.84
SFXN3-205ENST00000470252 ZNF688P0C7X2 276 aa9.78□□□□□ -0.84
SFXN3-205ENST00000470252 NSUN5P1Q3KNT7 163 aa9.78□□□□□ -0.84
SFXN3-205ENST00000470252 A6NDX4 124 aa9.77□□□□□ -0.85
SFXN3-205ENST00000470252 H7C2G1 150 aa9.77□□□□□ -0.85
SFXN3-205ENST00000470252 IGLV1-40P01703 118 aa9.77□□□□□ -0.85
SFXN3-205ENST00000470252 RHOHQ15669 191 aa9.77□□□□□ -0.85
SFXN3-205ENST00000470252 VCX2Q9H322 139 aa9.77□□□□□ -0.85
SFXN3-205ENST00000470252 EIF4EBP3O60516 100 aaPredicted RBP9.76□□□□□ -0.85
SFXN3-205ENST00000470252 P0DMU3 169 aa9.76□□□□□ -0.85
SFXN3-205ENST00000470252 FAM231AP0DMU4 169 aa9.76□□□□□ -0.85
SFXN3-205ENST00000470252 FAM231CP0DMU5 169 aa9.76□□□□□ -0.85
SFXN3-205ENST00000470252 GAGE5Q13069 117 aa9.76□□□□□ -0.85
SFXN3-205ENST00000470252 GAGE6Q13070 117 aa9.76□□□□□ -0.85
SFXN3-205ENST00000470252 Q8N1Y9 231 aa9.76□□□□□ -0.85
SFXN3-205ENST00000470252 IGHV4-61A0A0C4DH41 118 aa9.76□□□□□ -0.85
SFXN3-205ENST00000470252 C9JAW5 83 aa9.76□□□□□ -0.85
SFXN3-205ENST00000470252 K7EMT4 169 aa9.76□□□□□ -0.85
SFXN3-205ENST00000470252 SLC25A20O43772 301 aa9.76□□□□□ -0.85
SFXN3-205ENST00000470252 ZNF22P17026 224 aaPredicted RBP9.76□□□□□ -0.85
SFXN3-205ENST00000470252 TRPT1Q86TN4 253 aaKnown RBP9.76□□□□□ -0.85
SFXN3-205ENST00000470252 RNF183Q96D59 192 aa9.76□□□□□ -0.85
SFXN3-205ENST00000470252 RHODO00212 210 aa9.75□□□□□ -0.85
SFXN3-205ENST00000470252 IGHV3-33P01772 117 aa9.75□□□□□ -0.85
SFXN3-205ENST00000470252 MUSTN1Q8IVN3 82 aa9.75□□□□□ -0.85
SFXN3-205ENST00000470252 TMEM263Q8WUH6 116 aaKnown RBP9.75□□□□□ -0.85
SFXN3-205ENST00000470252 A0A0J9YXV3 536 aa9.75□□□□□ -0.85
SFXN3-205ENST00000470252 GATA3P23771 443 aa9.75□□□□□ -0.85
SFXN3-205ENST00000470252 C20orf203Q8NBC4 194 aa9.75□□□□□ -0.85
SFXN3-205ENST00000470252 C19orf84I3L1E1 186 aa9.74□□□□□ -0.85
SFXN3-205ENST00000470252 PRRC2AP48634 2157 aaKnown RBP9.74□□□□□ -0.85
SFXN3-205ENST00000470252 A0A0B4J2C4 111 aa9.74□□□□□ -0.85
SFXN3-205ENST00000470252 HERV-K104P63124 156 aa9.74□□□□□ -0.85
SFXN3-205ENST00000470252 Q1RN00 199 aa9.74□□□□□ -0.85
SFXN3-205ENST00000470252 SPINK13Q1W4C9 94 aa9.74□□□□□ -0.85
SFXN3-205ENST00000470252 PIMREGQ9BSJ6 248 aa9.74□□□□□ -0.85
SFXN3-205ENST00000470252 IGHV1OR15-1A0A075B7D0 117 aa9.73□□□□□ -0.85
SFXN3-205ENST00000470252 A0A0J9YX75 114 aa9.73□□□□□ -0.85
SFXN3-205ENST00000470252 I3L3M4 83 aa9.73□□□□□ -0.85
SFXN3-205ENST00000470252 ODF3Q96PU9 254 aa9.73□□□□□ -0.85
SFXN3-205ENST00000470252 ZNF580Q9UK33 172 aa9.73□□□□□ -0.85
SFXN3-205ENST00000470252 SORL1Q92673 2214 aa9.73□□□□□ -0.85
SFXN3-205ENST00000470252 IGLV4-3A0A075B6K6 122 aa9.73□□□□□ -0.85
SFXN3-205ENST00000470252 SNRPD3P62318 126 aaKnown RBP9.73□□□□□ -0.85
SFXN3-205ENST00000470252 CFHR3Q02985 330 aa9.72□□□□□ -0.85
SFXN3-205ENST00000470252 TMEM262E9PQX1 116 aa9.72□□□□□ -0.85
SFXN3-205ENST00000470252 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.71□□□□□ -0.85
SFXN3-205ENST00000470252 ADARB2-AS1A8MUL3 147 aa9.71□□□□□ -0.85
SFXN3-205ENST00000470252 M0R2P5 195 aa9.71□□□□□ -0.85
SFXN3-205ENST00000470252 ZNF843Q8N446 348 aa9.71□□□□□ -0.85
SFXN3-205ENST00000470252 ANAPC13Q9BS18 74 aa9.71□□□□□ -0.85
SFXN3-205ENST00000470252 SPXQ9BT56 116 aa9.71□□□□□ -0.85
SFXN3-205ENST00000470252 A0A0J9YXY3 114 aa9.71□□□□□ -0.86
SFXN3-205ENST00000470252 ELANEP08246 267 aa9.71□□□□□ -0.86
SFXN3-205ENST00000470252 CFAP46Q8IYW2 2715 aa9.7□□□□□ -0.86
SFXN3-205ENST00000470252 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.7□□□□□ -0.864e-7■■□□□ 12.3
SFXN3-205ENST00000470252 BEX4Q9NWD9 120 aaPredicted RBP9.7□□□□□ -0.86
SFXN3-205ENST00000470252 TNFRSF18Q9Y5U5 241 aa9.7□□□□□ -0.86
SFXN3-205ENST00000470252 DOPEY2Q9Y3R5 2298 aa9.7□□□□□ -0.86
SFXN3-205ENST00000470252 VPS13CQ709C8 3753 aa9.7□□□□□ -0.86
SFXN3-205ENST00000470252 IGHV3-30-3P0DP02 117 aa9.7□□□□□ -0.86
SFXN3-205ENST00000470252 CD28P10747 220 aa9.7□□□□□ -0.86
SFXN3-205ENST00000470252 ATXN8Q156A1 80 aa9.7□□□□□ -0.86
SFXN3-205ENST00000470252 TIMM21Q9BVV7 248 aa9.7□□□□□ -0.86
SFXN3-205ENST00000470252 IGHV3-73A0A0B4J1V6 119 aa9.69□□□□□ -0.86
SFXN3-205ENST00000470252 K7EQG2 157 aa9.69□□□□□ -0.86
SFXN3-205ENST00000470252 M0QXV9 152 aa9.69□□□□□ -0.86
SFXN3-205ENST00000470252 C10orf99Q6UWK7 81 aa9.69□□□□□ -0.86
SFXN3-205ENST00000470252 COL12A1Q99715 3063 aa9.69□□□□□ -0.86
SFXN3-205ENST00000470252 PSMB8P28062 276 aa9.68□□□□□ -0.86
SFXN3-205ENST00000470252 LINC01620Q4KN68 170 aa9.68□□□□□ -0.86
SFXN3-205ENST00000470252 ZFAND6Q6FIF0 208 aa9.68□□□□□ -0.86
SFXN3-205ENST00000470252 C10orf105Q8TEF2 133 aa9.68□□□□□ -0.86
SFXN3-205ENST00000470252 NTN5Q8WTR8 489 aaPredicted RBP9.68□□□□□ -0.86
SFXN3-205ENST00000470252 TRAV8-3A0A0A6YYJ7 113 aa9.68□□□□□ -0.86
SFXN3-205ENST00000470252 PRSS2P07478 247 aa9.67□□□□□ -0.86
SFXN3-205ENST00000470252 HTN1P15515 57 aa9.67□□□□□ -0.86
SFXN3-205ENST00000470252 RNASE13Q5GAN3 156 aaKnown RBP9.67□□□□□ -0.86
SFXN3-205ENST00000470252 CEMP1Q6PRD7 247 aaPredicted RBP9.67□□□□□ -0.86
SFXN3-205ENST00000470252 TRGV11A0A075B6L2 103 aa9.67□□□□□ -0.86
SFXN3-205ENST00000470252 B5MCH6 92 aa9.67□□□□□ -0.86
SFXN3-205ENST00000470252 TRIAP1O43715 76 aa9.67□□□□□ -0.86
SFXN3-205ENST00000470252 TEX29Q8N6K0 151 aa9.67□□□□□ -0.86
SFXN3-205ENST00000470252 CCL19Q99731 98 aa9.67□□□□□ -0.86
SFXN3-205ENST00000470252 MSMBP08118 114 aa9.66□□□□□ -0.86
SFXN3-205ENST00000470252 NACAE9PAV3 2078 aa9.66□□□□□ -0.86
SFXN3-205ENST00000470252 IGHV4-30-2A0A087WSY4 118 aa9.66□□□□□ -0.86
SFXN3-205ENST00000470252 SYNJ2BPP57105 145 aa9.66□□□□□ -0.86
SFXN3-205ENST00000470252 PROK1P58294 105 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms