RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 UQCR10Q9UDW1 63 aa1.17□□□□□ -2.22
BRCA2-202ENST00000470094 CACFD1Q9UGQ2 172 aa1.17□□□□□ -2.22
BRCA2-202ENST00000470094 LSM2Q9Y333 95 aaKnown RBP1.17□□□□□ -2.22
BRCA2-202ENST00000470094 KMT2BQ9UMN6 2715 aaPredicted RBP1.17□□□□□ -2.22
BRCA2-202ENST00000470094 KIF14Q15058 1648 aa1.17□□□□□ -2.22
BRCA2-202ENST00000470094 ARAP2Q8WZ64 1704 aa1.17□□□□□ -2.22
BRCA2-202ENST00000470094 MYH8P13535 1937 aa1.17□□□□□ -2.22
BRCA2-202ENST00000470094 PTPRDP23468 1912 aa1.17□□□□□ -2.22
BRCA2-202ENST00000470094 NRKQ7Z2Y5 1582 aa1.17□□□□□ -2.22
BRCA2-202ENST00000470094 LTN1O94822 1766 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 BLMP54132 1417 aaPredicted RBP1.16□□□□□ -2.22
BRCA2-202ENST00000470094 PLXNA2O75051 1894 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 TANC1Q9C0D5 1861 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 EPRSP07814 1512 aaKnown RBP1.16□□□□□ -2.22
BRCA2-202ENST00000470094 CUX1P39880 1505 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 ZMYM4Q5VZL5 1548 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 SYCP2Q9BX26 1530 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 EXPH5Q8NEV8 1989 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 LAMC1P11047 1609 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 C3orf85A0A1B0GTC6 90 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 FAM236AA0A1B0GUQ0 79 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 FAM236BA0A1B0GV22 79 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 BBIP1A8MTZ0 92 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 MCRIP1C9JLW8 97 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 K7EP34 96 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 GEMIN2O14893 280 aaKnown RBP1.16□□□□□ -2.22
BRCA2-202ENST00000470094 SSSCA1O60232 199 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 PITX3O75364 302 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 NDUFB6O95139 128 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 GYPAP02724 150 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 RBP4P02753 201 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 IL9P15248 144 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 ADCYAP1P18509 176 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 SEC11AP67812 179 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 DEFA5Q01523 94 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 MPV17LQ2QL34 196 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 SPRNQ5BIV9 151 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 XAF1Q6GPH4 301 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 VSTM2AQ8TAG5 236 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 CDC42SE1Q9NRR8 79 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 PXDNQ92626 1479 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 SETBP1Q9Y6X0 1596 aa1.16□□□□□ -2.22
BRCA2-202ENST00000470094 MUC4Q99102 2169 aa1.15□□□□□ -2.22
BRCA2-202ENST00000470094 ABCA6Q8N139 1617 aa1.15□□□□□ -2.22
BRCA2-202ENST00000470094 SPHKAPQ2M3C7 1700 aa1.15□□□□□ -2.22
BRCA2-202ENST00000470094 CDC42BPAQ5VT25 1732 aa1.15□□□□□ -2.22
BRCA2-202ENST00000470094 BTAF1O14981 1849 aa1.15□□□□□ -2.22
BRCA2-202ENST00000470094 TRAV2A0A0B4J234 112 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 IGHV1-24A0A0C4DH33 117 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 A0A0J9YY99 117 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 TRBV7-7A0A0K0K1E9 115 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 APOC4-APOC2K7ER74 178 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 SFT2D2O95562 160 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 APOC2P02655 101 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 MT-ATP8P03928 68 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 IL5P05113 134 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 LYNX1P0DP58 116 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 POLR2JP52435 117 aaKnown RBP1.15□□□□□ -2.23
BRCA2-202ENST00000470094 UNQ5815/PRO19632Q6UWF5 114 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 ATP11AUNQ6ZP68 121 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 COMMD6Q7Z4G1 85 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 SBSPONQ8IVN8 264 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 C18orf32Q8TCD1 76 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 COPS9Q8WXC6 57 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 SMIM7Q9BQ49 75 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 VAMP8Q9BV40 100 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 DPH3P1Q9H4G8 78 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 ST20Q9HBF5 79 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 NOP16Q9Y3C1 178 aaKnown RBP1.15□□□□□ -2.23
BRCA2-202ENST00000470094 SERP1Q9Y6X1 66 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 C1orf167Q5SNV9 1468 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 PRXQ9BXM0 1461 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 SHANK2Q9UPX8 1470 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 TARBP1Q13395 1621 aaKnown RBP1.15□□□□□ -2.23
BRCA2-202ENST00000470094 ARHGAP5Q13017 1502 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.15□□□□□ -2.23
BRCA2-202ENST00000470094 LRRC7Q96NW7 1537 aa1.15□□□□□ -2.23
BRCA2-202ENST00000470094 EML5Q05BV3 1969 aa1.14□□□□□ -2.23
BRCA2-202ENST00000470094 PDCD11Q14690 1871 aaKnown RBP1.14□□□□□ -2.23
BRCA2-202ENST00000470094 RGPD2P0DJD1 1756 aa1.14□□□□□ -2.23
BRCA2-202ENST00000470094 KDM3BQ7LBC6 1761 aa1.14□□□□□ -2.23
BRCA2-202ENST00000470094 CROCC2H7BZ55 1655 aa1.14□□□□□ -2.23
BRCA2-202ENST00000470094 TET3O43151 1660 aa1.14□□□□□ -2.23
BRCA2-202ENST00000470094 ABCA8O94911 1581 aa1.14□□□□□ -2.23
BRCA2-202ENST00000470094 DIP2CQ9Y2E4 1556 aa1.14□□□□□ -2.23
BRCA2-202ENST00000470094 CEP170BQ9Y4F5 1589 aaPredicted RBP1.14□□□□□ -2.23
BRCA2-202ENST00000470094 CFTRP13569 1480 aa1.14□□□□□ -2.23
BRCA2-202ENST00000470094 LRRC9Q6ZRR7 1453 aa1.14□□□□□ -2.23
BRCA2-202ENST00000470094 CDK12Q9NYV4 1490 aaPredicted RBP1.14□□□□□ -2.23
BRCA2-202ENST00000470094 C7orf77A4D0Y5 90 aa1.14□□□□□ -2.23
BRCA2-202ENST00000470094 OOSP1A8MZH6 123 aa1.14□□□□□ -2.23
BRCA2-202ENST00000470094 ANGP03950 147 aaKnown RBP1.14□□□□□ -2.23
BRCA2-202ENST00000470094 GYPBP06028 91 aa1.14□□□□□ -2.23
BRCA2-202ENST00000470094 SLC25A6P12236 298 aa1.14□□□□□ -2.23
BRCA2-202ENST00000470094 GNG11P61952 73 aa1.14□□□□□ -2.23
BRCA2-202ENST00000470094 BVES-AS1Q5T3Y7 98 aa1.14□□□□□ -2.23
BRCA2-202ENST00000470094 DOCK2Q92608 1830 aa1.14□□□□□ -2.23
BRCA2-202ENST00000470094 MARF1Q9Y4F3 1742 aaKnown RBP1.14□□□□□ -2.23
BRCA2-202ENST00000470094 SHROOM2Q13796 1616 aa1.14□□□□□ -2.23
BRCA2-202ENST00000470094 MROH1Q8NDA8 1641 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms