RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 LPAP08519 4548 aa11.87□□□□□ -0.51
NCKIPSD-209ENST00000470006 TRBV6-1A0A0K0K1D8 114 aa11.86□□□□□ -0.51
NCKIPSD-209ENST00000470006 A6NHS1 94 aa11.86□□□□□ -0.51
NCKIPSD-209ENST00000470006 PEX7O00628 323 aa11.86□□□□□ -0.51
NCKIPSD-209ENST00000470006 A0A1W2PRE2 83 aa11.85□□□□□ -0.51
NCKIPSD-209ENST00000470006 UBE2G2P60604 165 aa11.85□□□□□ -0.51
NCKIPSD-209ENST00000470006 PRR27Q6MZM9 219 aa11.85□□□□□ -0.51
NCKIPSD-209ENST00000470006 ENKURQ8TC29 256 aa11.85□□□□□ -0.51
NCKIPSD-209ENST00000470006 KRTAP9-2Q9BYQ4 174 aa11.85□□□□□ -0.51
NCKIPSD-209ENST00000470006 IGHV1-24A0A0C4DH33 117 aa11.84□□□□□ -0.51
NCKIPSD-209ENST00000470006 MUC21A0A0G2JKD1 596 aa11.84□□□□□ -0.51
NCKIPSD-209ENST00000470006 NDUFS6O75380 124 aaKnown RBP11.84□□□□□ -0.51
NCKIPSD-209ENST00000470006 MBP02144 154 aa11.84□□□□□ -0.51
NCKIPSD-209ENST00000470006 PRSS3P2Q8NHM4 247 aa11.84□□□□□ -0.51
NCKIPSD-209ENST00000470006 ACTR3CQ9C0K3 210 aaPredicted RBP11.84□□□□□ -0.51
NCKIPSD-209ENST00000470006 GZMBP10144 247 aa11.83□□□□□ -0.52
NCKIPSD-209ENST00000470006 RPS10P46783 165 aaKnown RBP11.83□□□□□ -0.52
NCKIPSD-209ENST00000470006 SSTP61278 116 aa11.83□□□□□ -0.52
NCKIPSD-209ENST00000470006 LINC01559Q495D7 138 aa11.83□□□□□ -0.52
NCKIPSD-209ENST00000470006 CCDC32Q9BV29 185 aa11.83□□□□□ -0.52
NCKIPSD-209ENST00000470006 ZNF471Q9BX82 626 aaPredicted RBP11.83□□□□□ -0.52
NCKIPSD-209ENST00000470006 ZFP30Q9Y2G7 519 aa11.83□□□□□ -0.52
NCKIPSD-209ENST00000470006 DEFA3P59666 94 aa11.82□□□□□ -0.52
NCKIPSD-209ENST00000470006 UBE2G1P62253 170 aa11.82□□□□□ -0.52
NCKIPSD-209ENST00000470006 CFAP161Q6P656 301 aa11.82□□□□□ -0.52
NCKIPSD-209ENST00000470006 VAX2Q9UIW0 290 aa11.82□□□□□ -0.52
NCKIPSD-209ENST00000470006 MUC21A0A140T8X8 626 aa11.81□□□□□ -0.52
NCKIPSD-209ENST00000470006 SSNA1O43805 119 aa11.81□□□□□ -0.52
NCKIPSD-209ENST00000470006 ATP6V0CP27449 155 aa11.81□□□□□ -0.52
NCKIPSD-209ENST00000470006 IQCJQ1A5X6 159 aa11.81□□□□□ -0.52
NCKIPSD-209ENST00000470006 ZNF674Q2M3X9 581 aa11.81□□□□□ -0.52
NCKIPSD-209ENST00000470006 C20orf203Q8NBC4 194 aa11.81□□□□□ -0.52
NCKIPSD-209ENST00000470006 OR10AG1Q8NH19 301 aa11.81□□□□□ -0.52
NCKIPSD-209ENST00000470006 HIST1H2BAQ96A08 127 aa11.81□□□□□ -0.52
NCKIPSD-209ENST00000470006 SMIM17P0DL12 118 aa11.8□□□□□ -0.52
NCKIPSD-209ENST00000470006 SULT1A2P50226 295 aa11.8□□□□□ -0.52
NCKIPSD-209ENST00000470006 HIGD2BQ4VC39 106 aa11.8□□□□□ -0.52
NCKIPSD-209ENST00000470006 SPANXN1Q5VSR9 72 aa11.8□□□□□ -0.52
NCKIPSD-209ENST00000470006 IGLV4-60A0A075B6I1 120 aa11.79□□□□□ -0.52
NCKIPSD-209ENST00000470006 H7C1H1 209 aa11.79□□□□□ -0.52
NCKIPSD-209ENST00000470006 FMC1Q96HJ9 113 aa11.79□□□□□ -0.52
NCKIPSD-209ENST00000470006 PSMG3Q9BT73 122 aaPredicted RBP11.79□□□□□ -0.52
NCKIPSD-209ENST00000470006 GAGE12HA6NDE8 117 aa11.78□□□□□ -0.52
NCKIPSD-209ENST00000470006 SERF2P84101 59 aa11.78□□□□□ -0.52
NCKIPSD-209ENST00000470006 Q6ZRP5 223 aa11.78□□□□□ -0.52
NCKIPSD-209ENST00000470006 COX8CQ7Z4L0 72 aa11.78□□□□□ -0.52
NCKIPSD-209ENST00000470006 C15orf56Q8N910 161 aa11.78□□□□□ -0.52
NCKIPSD-209ENST00000470006 AQP10Q96PS8 301 aa11.78□□□□□ -0.52
NCKIPSD-209ENST00000470006 GFRA4Q9GZZ7 299 aa11.78□□□□□ -0.52
NCKIPSD-209ENST00000470006 IGKV3OR2-268A0A0C4DH90 116 aa11.77□□□□□ -0.53
NCKIPSD-209ENST00000470006 INMT-MINDY4F8WBC2 141 aa11.77□□□□□ -0.53
NCKIPSD-209ENST00000470006 TMEM243Q9BU79 118 aa11.77□□□□□ -0.53
NCKIPSD-209ENST00000470006 NKX6-2Q9C056 277 aaPredicted RBP11.77□□□□□ -0.53
NCKIPSD-209ENST00000470006 A0A096LNI7 61 aa11.76□□□□□ -0.53
NCKIPSD-209ENST00000470006 FAM231BA6NCW3 169 aa11.76□□□□□ -0.53
NCKIPSD-209ENST00000470006 UBE2L6O14933 153 aa11.76□□□□□ -0.53
NCKIPSD-209ENST00000470006 SRSF9Q13242 221 aaKnown RBP eCLIP11.76□□□□□ -0.53
NCKIPSD-209ENST00000470006 TNFSF18Q9UNG2 199 aa11.76□□□□□ -0.53
NCKIPSD-209ENST00000470006 A0A1B0GUV1 79 aa11.75□□□□□ -0.53
NCKIPSD-209ENST00000470006 FAM74A7A6NL05 159 aa11.75□□□□□ -0.53
NCKIPSD-209ENST00000470006 LINC00474Q9P2X8 69 aa11.75□□□□□ -0.53
NCKIPSD-209ENST00000470006 MGPP08493 103 aa11.74□□□□□ -0.53
NCKIPSD-209ENST00000470006 A0A0U1RQV1 116 aa11.73□□□□□ -0.53
NCKIPSD-209ENST00000470006 LTAP01374 205 aa11.73□□□□□ -0.53
NCKIPSD-209ENST00000470006 AP1S3Q96PC3 154 aa11.72□□□□□ -0.53
NCKIPSD-209ENST00000470006 CTXND1A0A1B0GTU2 59 aa11.71□□□□□ -0.53
NCKIPSD-209ENST00000470006 AKR1C3P42330 323 aa11.71□□□□□ -0.53
NCKIPSD-209ENST00000470006 NKX2-5P52952 324 aaPredicted RBP11.71□□□□□ -0.53
NCKIPSD-209ENST00000470006 SNAI2O43623 268 aa11.7□□□□□ -0.54
NCKIPSD-209ENST00000470006 ZNF726P1Q15940 193 aa11.7□□□□□ -0.54
NCKIPSD-209ENST00000470006 CST9LP1Q5W188 147 aa11.7□□□□□ -0.54
NCKIPSD-209ENST00000470006 INO80EQ8NBZ0 244 aaPredicted RBP11.7□□□□□ -0.54
NCKIPSD-209ENST00000470006 STOML3Q8TAV4 291 aa11.7□□□□□ -0.54
NCKIPSD-209ENST00000470006 PKIGQ9Y2B9 76 aa11.7□□□□□ -0.54
NCKIPSD-209ENST00000470006 OR5AL1P0C617 328 aa11.69□□□□□ -0.54
NCKIPSD-209ENST00000470006 SSBP4Q9BWG4 385 aaPredicted RBP11.69□□□□□ -0.54
NCKIPSD-209ENST00000470006 TRAV26-2A0A0B4J265 109 aa11.68□□□□□ -0.54
NCKIPSD-209ENST00000470006 M0QY20 66 aa11.68□□□□□ -0.54
NCKIPSD-209ENST00000470006 CXCL1P09341 107 aa11.68□□□□□ -0.54
NCKIPSD-209ENST00000470006 ZNF664Q8N3J9 261 aa11.68□□□□□ -0.54
NCKIPSD-209ENST00000470006 MUC2Q02817 5179 aa11.68□□□□□ -0.54
NCKIPSD-209ENST00000470006 KRTAP9-6A0A140TA67 174 aa11.67□□□□□ -0.54
NCKIPSD-209ENST00000470006 AMTP48728 403 aa11.67□□□□□ -0.54
NCKIPSD-209ENST00000470006 SUMO4Q6EEV6 95 aa11.67□□□□□ -0.54
NCKIPSD-209ENST00000470006 CHCHD10Q8WYQ3 142 aaPredicted RBP11.67□□□□□ -0.54
NCKIPSD-209ENST00000470006 GVQW2A0A096LPI5 108 aaPredicted RBP11.66□□□□□ -0.54
NCKIPSD-209ENST00000470006 CACNG7P62955 275 aa11.66□□□□□ -0.54
NCKIPSD-209ENST00000470006 MARVELD1Q9BSK0 173 aa11.66□□□□□ -0.54
NCKIPSD-209ENST00000470006 TPPP3Q9BW30 176 aa11.66□□□□□ -0.54
NCKIPSD-209ENST00000470006 PSORS1C2Q9UIG4 136 aa11.65□□□□□ -0.54
NCKIPSD-209ENST00000470006 COTL1Q14019 142 aa11.64□□□□□ -0.55
NCKIPSD-209ENST00000470006 AKR1C8PQ5T2L2 129 aa11.64□□□□□ -0.55
NCKIPSD-209ENST00000470006 AMMECR1LQ6DCA0 310 aa11.64□□□□□ -0.55
NCKIPSD-209ENST00000470006 RASL11AQ6T310 242 aa11.64□□□□□ -0.55
NCKIPSD-209ENST00000470006 S100ZQ8WXG8 99 aa11.64□□□□□ -0.55
NCKIPSD-209ENST00000470006 LINC00526Q96FQ7 95 aa11.64□□□□□ -0.55
NCKIPSD-209ENST00000470006 CARD19Q96LW7 228 aa11.64□□□□□ -0.55
NCKIPSD-209ENST00000470006 TCEAL7Q9BRU2 100 aa11.64□□□□□ -0.55
NCKIPSD-209ENST00000470006 BORCS7-ASMTA0A0B4J1R7 106 aa11.63□□□□□ -0.55
NCKIPSD-209ENST00000470006 MAP1LC3B2A6NCE7 125 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms