RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 NAA60Q9H7X0 242 aa0.82□□□□□ -2.28
VPS8-220ENST00000469713 MRPL36Q9P0J6 103 aaKnown RBP0.82□□□□□ -2.28
VPS8-220ENST00000469713 FBN2P35556 2912 aa0.82□□□□□ -2.28
VPS8-220ENST00000469713 MKI67P46013 3256 aaKnown RBP0.82□□□□□ -2.28
VPS8-220ENST00000469713 REV3LO60673 3130 aa0.82□□□□□ -2.28
VPS8-220ENST00000469713 PEAK1Q9H792 1746 aa0.81□□□□□ -2.28
VPS8-220ENST00000469713 DNAH12Q6ZR08 3092 aa0.81□□□□□ -2.28
VPS8-220ENST00000469713 A2ML1A8K2U0 1454 aa0.81□□□□□ -2.28
VPS8-220ENST00000469713 PTPRMP28827 1452 aa0.81□□□□□ -2.28
VPS8-220ENST00000469713 CFAP47Q6ZTR5 3102 aa0.81□□□□□ -2.28
VPS8-220ENST00000469713 A0A0J9YY99 117 aa0.81□□□□□ -2.28
VPS8-220ENST00000469713 NUPR2A6NF83 97 aa0.81□□□□□ -2.28
VPS8-220ENST00000469713 NDUFB6O95139 128 aa0.81□□□□□ -2.28
VPS8-220ENST00000469713 SMIM6P0DI80 62 aa0.81□□□□□ -2.28
VPS8-220ENST00000469713 RBM3P98179 157 aaKnown RBP0.81□□□□□ -2.28
VPS8-220ENST00000469713 INSL4Q14641 139 aa0.81□□□□□ -2.28
VPS8-220ENST00000469713 C9orf153Q5TBE3 101 aa0.81□□□□□ -2.28
VPS8-220ENST00000469713 MRPL54Q6P161 138 aaKnown RBP0.81□□□□□ -2.28
VPS8-220ENST00000469713 Q8N8P6 123 aa0.81□□□□□ -2.28
VPS8-220ENST00000469713 PLPP5Q8NEB5 264 aa0.81□□□□□ -2.28
VPS8-220ENST00000469713 IFI27L1Q96BM0 104 aa0.81□□□□□ -2.28
VPS8-220ENST00000469713 PPP3R2Q96LZ3 170 aa0.81□□□□□ -2.28
VPS8-220ENST00000469713 DSCR8Q96T75 97 aa0.81□□□□□ -2.28
VPS8-220ENST00000469713 UTP20O75691 2785 aaKnown RBP0.81□□□□□ -2.28
VPS8-220ENST00000469713 LAMB1P07942 1786 aa0.8□□□□□ -2.28
VPS8-220ENST00000469713 SONP18583 2426 aaKnown RBP0.8□□□□□ -2.28
VPS8-220ENST00000469713 APOC4-APOC2K7ER74 178 aa0.8□□□□□ -2.28
VPS8-220ENST00000469713 TNFP01375 233 aa0.8□□□□□ -2.28
VPS8-220ENST00000469713 APOC2P02655 101 aa0.8□□□□□ -2.28
VPS8-220ENST00000469713 PDE6GP18545 87 aa0.8□□□□□ -2.28
VPS8-220ENST00000469713 FXYD4P59646 89 aa0.8□□□□□ -2.28
VPS8-220ENST00000469713 NPC2P61916 151 aa0.8□□□□□ -2.28
VPS8-220ENST00000469713 HSD52Q0P140 79 aa0.8□□□□□ -2.28
VPS8-220ENST00000469713 C9orf116Q5BN46 136 aaPredicted RBP0.8□□□□□ -2.28
VPS8-220ENST00000469713 NCMAPQ5T1S8 102 aa0.8□□□□□ -2.28
VPS8-220ENST00000469713 SPANXN1Q5VSR9 72 aa0.8□□□□□ -2.28
VPS8-220ENST00000469713 Q6AWC8 147 aa0.8□□□□□ -2.28
VPS8-220ENST00000469713 SPTSSBQ8NFR3 76 aa0.8□□□□□ -2.28
VPS8-220ENST00000469713 C10orf82Q8WW14 230 aa0.8□□□□□ -2.28
VPS8-220ENST00000469713 COPS9Q8WXC6 57 aa0.8□□□□□ -2.28
VPS8-220ENST00000469713 TMEM141Q96I45 108 aa0.8□□□□□ -2.28
VPS8-220ENST00000469713 MRPL35Q9NZE8 188 aaKnown RBP0.8□□□□□ -2.28
VPS8-220ENST00000469713 IER3IP1Q9Y5U9 82 aa0.8□□□□□ -2.28
VPS8-220ENST00000469713 CITO14578 2027 aa0.8□□□□□ -2.28
VPS8-220ENST00000469713 ZFHX4Q86UP3 3567 aa0.8□□□□□ -2.28
VPS8-220ENST00000469713 MYO18AQ92614 2054 aaKnown RBP0.8□□□□□ -2.28
VPS8-220ENST00000469713 CCNB3Q8WWL7 1395 aa0.8□□□□□ -2.28
VPS8-220ENST00000469713 UNC13CQ8NB66 2214 aa0.8□□□□□ -2.28
VPS8-220ENST00000469713 DOCK1Q14185 1865 aa0.8□□□□□ -2.28
VPS8-220ENST00000469713 BSNQ9UPA5 3926 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 POLQO75417 2590 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 STAB2Q8WWQ8 2551 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 NBEAL1Q6ZS30 2694 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 ARAP2Q8WZ64 1704 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 TRAV2A0A0B4J234 112 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 LOC101927531A0A1B0GV80 90 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 TCRBV3S1A0A5B6 114 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 IFNA17P01571 189 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 IGHV3-30P01768 117 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 GYPBP06028 91 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 CCKP06307 115 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 SPINK8P0C7L1 97 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 IGHV3-30-5P0DP03 117 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 PIPP12273 146 aaPredicted RBP0.79□□□□□ -2.28
VPS8-220ENST00000469713 EFNA4P52798 201 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 SLC48A1Q6P1K1 146 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 LINC00299Q6ZSB3 139 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 GTF2H5Q6ZYL4 71 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 SBSPONQ8IVN8 264 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 PPDPFLQ8WWR9 84 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 ATG5Q9H1Y0 275 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 RPRMQ9NS64 109 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 ZANQ9Y493 2812 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 AFDNP55196 1824 aaKnown RBP0.79□□□□□ -2.28
VPS8-220ENST00000469713 PATJQ8NI35 1801 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 ARFGEF1Q9Y6D6 1849 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 MYH8P13535 1937 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 SYNE2Q8WXH0 6885 aaKnown RBP0.79□□□□□ -2.28
VPS8-220ENST00000469713 MRC2Q9UBG0 1479 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 ZFYVE16Q7Z3T8 1539 aa0.79□□□□□ -2.28
VPS8-220ENST00000469713 RREB1Q92766 1687 aa0.78□□□□□ -2.28
VPS8-220ENST00000469713 DLEC1Q9Y238 1755 aa0.78□□□□□ -2.28
VPS8-220ENST00000469713 ZNF469Q96JG9 3925 aaPredicted RBP0.78□□□□□ -2.28
VPS8-220ENST00000469713 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
VPS8-220ENST00000469713 TRAV30A0A087WSZ9 112 aa0.78□□□□□ -2.28
VPS8-220ENST00000469713 IGLV3-32A0A0A0MS00 114 aa0.78□□□□□ -2.28
VPS8-220ENST00000469713 TRAV12-3A0A0B4J271 114 aa0.78□□□□□ -2.28
VPS8-220ENST00000469713 TRBV10-1A0A0K0K1A3 114 aa0.78□□□□□ -2.28
VPS8-220ENST00000469713 TMEM218A2RU14 115 aa0.78□□□□□ -2.28
VPS8-220ENST00000469713 A6NIN4 97 aa0.78□□□□□ -2.28
VPS8-220ENST00000469713 MPC2O95563 127 aa0.78□□□□□ -2.28
VPS8-220ENST00000469713 IFITM1P13164 125 aa0.78□□□□□ -2.28
VPS8-220ENST00000469713 CBLN1P23435 193 aa0.78□□□□□ -2.28
VPS8-220ENST00000469713 S100A10P60903 97 aa0.78□□□□□ -2.28
VPS8-220ENST00000469713 RPL37AP61513 92 aaKnown RBP0.78□□□□□ -2.28
VPS8-220ENST00000469713 SPATA45Q537H7 98 aa0.78□□□□□ -2.28
VPS8-220ENST00000469713 RPL7L1Q6DKI1 246 aaKnown RBP0.78□□□□□ -2.28
VPS8-220ENST00000469713 KRTAP5-10Q6L8G5 202 aa0.78□□□□□ -2.28
VPS8-220ENST00000469713 SVBPQ8N300 66 aa0.78□□□□□ -2.28
VPS8-220ENST00000469713 DMAC1Q96GE9 116 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms