RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 CD300EQ496F6 205 aaPredicted RBP10.79□□□□□ -0.68
CBWD3-205ENST00000469687 HIST2H2BCQ6DN03 193 aa10.79□□□□□ -0.68
CBWD3-205ENST00000469687 IGHV3-73A0A0B4J1V6 119 aa10.78□□□□□ -0.68
CBWD3-205ENST00000469687 RIPPLY3P57055 190 aa10.78□□□□□ -0.68
CBWD3-205ENST00000469687 SAMD5Q5TGI4 173 aa10.78□□□□□ -0.68
CBWD3-205ENST00000469687 GTF2H5Q6ZYL4 71 aa10.78□□□□□ -0.68
CBWD3-205ENST00000469687 OPRPNQ99935 248 aaPredicted RBP10.78□□□□□ -0.68
CBWD3-205ENST00000469687 TRBV7-3A0A075B6L6 115 aa10.77□□□□□ -0.68
CBWD3-205ENST00000469687 H3BMM0 161 aa10.77□□□□□ -0.68
CBWD3-205ENST00000469687 PROK1P58294 105 aa10.77□□□□□ -0.68
CBWD3-205ENST00000469687 KLHL30-AS1Q8NEE0 82 aa10.77□□□□□ -0.68
CBWD3-205ENST00000469687 WFDC11Q8NEX6 87 aa10.77□□□□□ -0.68
CBWD3-205ENST00000469687 HIST1H4GQ99525 98 aa10.77□□□□□ -0.68
CBWD3-205ENST00000469687 SPCS1Q9Y6A9 102 aa10.77□□□□□ -0.68
CBWD3-205ENST00000469687 P0DMU3 169 aa10.77□□□□□ -0.69
CBWD3-205ENST00000469687 FAM231AP0DMU4 169 aa10.77□□□□□ -0.69
CBWD3-205ENST00000469687 FAM231CP0DMU5 169 aa10.77□□□□□ -0.69
CBWD3-205ENST00000469687 PMVKQ15126 192 aa10.77□□□□□ -0.69
CBWD3-205ENST00000469687 C4orf3Q8WVX3 66 aa10.77□□□□□ -0.69
CBWD3-205ENST00000469687 TRGV11A0A075B6L2 103 aa10.76□□□□□ -0.69
CBWD3-205ENST00000469687 RNF151Q2KHN1 245 aa10.76□□□□□ -0.69
CBWD3-205ENST00000469687 OCIAD2Q56VL3 154 aa10.76□□□□□ -0.69
CBWD3-205ENST00000469687 PLEKHB2Q96CS7 222 aa10.76□□□□□ -0.69
CBWD3-205ENST00000469687 ZNF815PA8K554 130 aa10.76□□□□□ -0.69
CBWD3-205ENST00000469687 TRPT1Q86TN4 253 aaKnown RBP10.76□□□□□ -0.69
CBWD3-205ENST00000469687 C11orf44Q8N8P7 122 aa10.76□□□□□ -0.69
CBWD3-205ENST00000469687 ZNRF2Q8NHG8 242 aa10.76□□□□□ -0.69
CBWD3-205ENST00000469687 TIMM17AQ99595 171 aa10.76□□□□□ -0.69
CBWD3-205ENST00000469687 Q6ZSV7 163 aa10.75□□□□□ -0.69
CBWD3-205ENST00000469687 Q9UF83 564 aa10.75□□□□□ -0.69
CBWD3-205ENST00000469687 SETD2Q9BYW2 2564 aaPredicted RBP10.75□□□□□ -0.69
CBWD3-205ENST00000469687 FABP2P12104 132 aa10.75□□□□□ -0.69
CBWD3-205ENST00000469687 TAL2Q16559 108 aa10.75□□□□□ -0.69
CBWD3-205ENST00000469687 TMEM141Q96I45 108 aa10.75□□□□□ -0.69
CBWD3-205ENST00000469687 MAP6D1Q9H9H5 199 aa10.75□□□□□ -0.69
CBWD3-205ENST00000469687 PEMTQ9UBM1 199 aa10.75□□□□□ -0.69
CBWD3-205ENST00000469687 A8MTW9 85 aa10.74□□□□□ -0.69
CBWD3-205ENST00000469687 C12orf74Q32Q52 190 aa10.74□□□□□ -0.69
CBWD3-205ENST00000469687 CBY1Q9Y3M2 126 aa10.74□□□□□ -0.69
CBWD3-205ENST00000469687 NIPBLQ6KC79 2804 aaeCLIP10.73□□□□□ -0.69
CBWD3-205ENST00000469687 SAP30O75446 220 aa10.73□□□□□ -0.69
CBWD3-205ENST00000469687 TSPEAR-AS2P59090 65 aa10.73□□□□□ -0.69
CBWD3-205ENST00000469687 NSUN5P1Q3KNT7 163 aa10.73□□□□□ -0.69
CBWD3-205ENST00000469687 DYNLRB2Q8TF09 96 aa10.73□□□□□ -0.69
CBWD3-205ENST00000469687 ACANP16112 2415 aa10.73□□□□□ -0.69
CBWD3-205ENST00000469687 DEFB114Q30KQ6 69 aa10.73□□□□□ -0.69
CBWD3-205ENST00000469687 A0A1W2PRX2 142 aa10.72□□□□□ -0.69
CBWD3-205ENST00000469687 SCGB2A2Q13296 93 aa10.72□□□□□ -0.69
CBWD3-205ENST00000469687 TMEM170BQ5T4T1 132 aa10.72□□□□□ -0.69
CBWD3-205ENST00000469687 ANK3Q12955 4377 aaKnown RBP10.72□□□□□ -0.69
CBWD3-205ENST00000469687 DNAJC9-AS1A6NH13 148 aa10.72□□□□□ -0.69
CBWD3-205ENST00000469687 IGLL5B9A064 214 aa10.72□□□□□ -0.69
CBWD3-205ENST00000469687 I3L3M4 83 aa10.72□□□□□ -0.69
CBWD3-205ENST00000469687 RHOHQ15669 191 aa10.72□□□□□ -0.69
CBWD3-205ENST00000469687 SCGB1D4Q6XE38 83 aa10.72□□□□□ -0.69
CBWD3-205ENST00000469687 C20orf203Q8NBC4 194 aa10.72□□□□□ -0.69
CBWD3-205ENST00000469687 ESM1Q9NQ30 184 aa10.72□□□□□ -0.69
CBWD3-205ENST00000469687 LINC01549A6NIU2 74 aa10.71□□□□□ -0.69
CBWD3-205ENST00000469687 Q6ZSN1 163 aa10.71□□□□□ -0.69
CBWD3-205ENST00000469687 SPAG8Q99932 426 aaPredicted RBP10.71□□□□□ -0.69
CBWD3-205ENST00000469687 RAX2Q96IS3 184 aa10.7□□□□□ -0.7
CBWD3-205ENST00000469687 PDZD2O15018 2839 aa10.7□□□□□ -0.7
CBWD3-205ENST00000469687 PAPPA-AS1Q5QFB9 102 aa10.7□□□□□ -0.7
CBWD3-205ENST00000469687 OR5A1Q8NGJ0 315 aa10.7□□□□□ -0.7
CBWD3-205ENST00000469687 TRAV2A0A0B4J234 112 aa10.69□□□□□ -0.7
CBWD3-205ENST00000469687 M0R2P5 195 aa10.69□□□□□ -0.7
CBWD3-205ENST00000469687 ZNF479Q96JC4 524 aa10.69□□□□□ -0.7
CBWD3-205ENST00000469687 HERVK_113P61574 105 aa10.69□□□□□ -0.7
CBWD3-205ENST00000469687 LINC01587Q99440 93 aa10.69□□□□□ -0.7
CBWD3-205ENST00000469687 IGLV4-3A0A075B6K6 122 aa10.68□□□□□ -0.7
CBWD3-205ENST00000469687 ODF3L2Q3SX64 289 aa10.68□□□□□ -0.7
CBWD3-205ENST00000469687 CEMP1Q6PRD7 247 aaPredicted RBP10.68□□□□□ -0.7
CBWD3-205ENST00000469687 C11orf72Q8NBR9 251 aa10.68□□□□□ -0.7
CBWD3-205ENST00000469687 NOTCH3Q9UM47 2321 aa10.68□□□□□ -0.7
CBWD3-205ENST00000469687 MTORP42345 2549 aa10.68□□□□□ -0.7
CBWD3-205ENST00000469687 ITPR2Q14571 2701 aa10.68□□□□□ -0.7
CBWD3-205ENST00000469687 A0A0J9YY99 117 aa10.67□□□□□ -0.7
CBWD3-205ENST00000469687 A0A1B0GWB2 263 aa10.67□□□□□ -0.7
CBWD3-205ENST00000469687 CD28P10747 220 aa10.67□□□□□ -0.7
CBWD3-205ENST00000469687 FAM104AQ969W3 186 aa10.67□□□□□ -0.7
CBWD3-205ENST00000469687 MRPL16Q9NX20 251 aaKnown RBP10.67□□□□□ -0.7
CBWD3-205ENST00000469687 IGHV3-64A0A075B6Q5 118 aa10.67□□□□□ -0.7
CBWD3-205ENST00000469687 ZNF415Q09FC8 603 aa10.67□□□□□ -0.7
CBWD3-205ENST00000469687 SRSF9Q13242 221 aaKnown RBP eCLIP10.67□□□□□ -0.7
CBWD3-205ENST00000469687 C21orf62-AS1Q17RA5 79 aa10.67□□□□□ -0.7
CBWD3-205ENST00000469687 CFAP126Q5VTH2 177 aa10.67□□□□□ -0.7
CBWD3-205ENST00000469687 TMEM86BQ8N661 226 aa10.67□□□□□ -0.7
CBWD3-205ENST00000469687 AMELXQ99217 191 aa10.67□□□□□ -0.7
CBWD3-205ENST00000469687 XCL2Q9UBD3 114 aa10.67□□□□□ -0.7
CBWD3-205ENST00000469687 A0A0J9YXV3 536 aa10.66□□□□□ -0.7
CBWD3-205ENST00000469687 RNASE13Q5GAN3 156 aaKnown RBP10.66□□□□□ -0.7
CBWD3-205ENST00000469687 NFE4Q86UQ8 179 aa10.66□□□□□ -0.7
CBWD3-205ENST00000469687 JMJD1CQ15652 2540 aa10.66□□□□□ -0.7
CBWD3-205ENST00000469687 A8MWV9 139 aa10.66□□□□□ -0.7
CBWD3-205ENST00000469687 AZU1P20160 251 aa10.66□□□□□ -0.7
CBWD3-205ENST00000469687 RRN3P1Q2M238 152 aa10.66□□□□□ -0.7
CBWD3-205ENST00000469687 EDA2RQ9HAV5 297 aa10.66□□□□□ -0.7
CBWD3-205ENST00000469687 SETXQ7Z333 2677 aaKnown RBP10.65□□□□□ -0.7
CBWD3-205ENST00000469687 J3QQQ9 107 aa10.65□□□□□ -0.7
CBWD3-205ENST00000469687 VPS25Q9BRG1 176 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms