RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 REG3GQ6UW15 175 aa11.43□□□□□ -0.58
TTC28-205ENST00000469670 PSMG3Q9BT73 122 aaPredicted RBP11.43□□□□□ -0.58
TTC28-205ENST00000469670 DERL1Q9BUN8 251 aa11.43□□□□□ -0.58
TTC28-205ENST00000469670 VAX2Q9UIW0 290 aa11.43□□□□□ -0.58
TTC28-205ENST00000469670 ZFP30Q9Y2G7 519 aa11.43□□□□□ -0.58
TTC28-205ENST00000469670 TRAV8-4A0A0B4J246 113 aa11.42□□□□□ -0.58
TTC28-205ENST00000469670 TRBV6-1A0A0K0K1D8 114 aa11.42□□□□□ -0.58
TTC28-205ENST00000469670 P01737 135 aa11.42□□□□□ -0.58
TTC28-205ENST00000469670 ATP6V0CP27449 155 aa11.42□□□□□ -0.58
TTC28-205ENST00000469670 ZNF674Q2M3X9 581 aa11.42□□□□□ -0.58
TTC28-205ENST00000469670 ACTR3CQ9C0K3 210 aaPredicted RBP11.42□□□□□ -0.58
TTC28-205ENST00000469670 UBE2G2P60604 165 aa11.41□□□□□ -0.58
TTC28-205ENST00000469670 COX6A2Q02221 97 aa11.41□□□□□ -0.58
TTC28-205ENST00000469670 MAJINQ3KP22 176 aa11.41□□□□□ -0.58
TTC28-205ENST00000469670 SPINK6Q6UWN8 80 aa11.41□□□□□ -0.58
TTC28-205ENST00000469670 HIST1H2BAQ96A08 127 aa11.41□□□□□ -0.58
TTC28-205ENST00000469670 INMT-MINDY4F8WBC2 141 aa11.4□□□□□ -0.58
TTC28-205ENST00000469670 RAB5CP51148 216 aa11.4□□□□□ -0.58
TTC28-205ENST00000469670 SERF2P84101 59 aa11.4□□□□□ -0.58
TTC28-205ENST00000469670 IQCJQ1A5X6 159 aa11.4□□□□□ -0.58
TTC28-205ENST00000469670 C20orf203Q8NBC4 194 aa11.4□□□□□ -0.58
TTC28-205ENST00000469670 LPAP08519 4548 aa11.39□□□□□ -0.59
TTC28-205ENST00000469670 IGKV2-24A0A0C4DH68 120 aa11.39□□□□□ -0.59
TTC28-205ENST00000469670 F5H697 171 aa11.39□□□□□ -0.59
TTC28-205ENST00000469670 SSNA1O43805 119 aa11.39□□□□□ -0.59
TTC28-205ENST00000469670 GZMBP10144 247 aa11.39□□□□□ -0.59
TTC28-205ENST00000469670 OR10AG1Q8NH19 301 aa11.39□□□□□ -0.59
TTC28-205ENST00000469670 LYPD6BQ8NI32 183 aa11.39□□□□□ -0.59
TTC28-205ENST00000469670 S100ZQ8WXG8 99 aa11.39□□□□□ -0.59
TTC28-205ENST00000469670 IGHV1-24A0A0C4DH33 117 aa11.38□□□□□ -0.59
TTC28-205ENST00000469670 MUC21A0A0G2JKD1 596 aa11.38□□□□□ -0.59
TTC28-205ENST00000469670 NDUFS6O75380 124 aaKnown RBP11.38□□□□□ -0.59
TTC28-205ENST00000469670 STPG4Q8N801 248 aa11.38□□□□□ -0.59
TTC28-205ENST00000469670 PRSS3P2Q8NHM4 247 aa11.38□□□□□ -0.59
TTC28-205ENST00000469670 FMC1Q96HJ9 113 aa11.38□□□□□ -0.59
TTC28-205ENST00000469670 ZNF471Q9BX82 626 aaPredicted RBP11.38□□□□□ -0.59
TTC28-205ENST00000469670 TNFSF18Q9UNG2 199 aa11.38□□□□□ -0.59
TTC28-205ENST00000469670 UBE2G1P62253 170 aa11.37□□□□□ -0.59
TTC28-205ENST00000469670 NKX6-2Q9C056 277 aaPredicted RBP11.37□□□□□ -0.59
TTC28-205ENST00000469670 IGLV4-60A0A075B6I1 120 aa11.36□□□□□ -0.59
TTC28-205ENST00000469670 FAM74A7A6NL05 159 aa11.36□□□□□ -0.59
TTC28-205ENST00000469670 RPS10P46783 165 aaKnown RBP11.36□□□□□ -0.59
TTC28-205ENST00000469670 C15orf56Q8N910 161 aa11.36□□□□□ -0.59
TTC28-205ENST00000469670 GFRA4Q9GZZ7 299 aa11.36□□□□□ -0.59
TTC28-205ENST00000469670 MUC21A0A140T8X8 626 aa11.35□□□□□ -0.59
TTC28-205ENST00000469670 A0A1B0GUV1 79 aa11.34□□□□□ -0.59
TTC28-205ENST00000469670 LTAP01374 205 aa11.34□□□□□ -0.59
TTC28-205ENST00000469670 SRSF9Q13242 221 aaKnown RBP eCLIP11.34□□□□□ -0.59
TTC28-205ENST00000469670 ZNF726P1Q15940 193 aa11.34□□□□□ -0.59
TTC28-205ENST00000469670 SPANXN1Q5VSR9 72 aa11.34□□□□□ -0.59
TTC28-205ENST00000469670 CFAP161Q6P656 301 aa11.34□□□□□ -0.59
TTC28-205ENST00000469670 SNAI2O43623 268 aa11.33□□□□□ -0.6
TTC28-205ENST00000469670 DEFA3P59666 94 aa11.33□□□□□ -0.6
TTC28-205ENST00000469670 AQP10Q96PS8 301 aa11.33□□□□□ -0.6
TTC28-205ENST00000469670 MARVELD1Q9BSK0 173 aa11.33□□□□□ -0.6
TTC28-205ENST00000469670 KRTAP9-2Q9BYQ4 174 aa11.33□□□□□ -0.6
TTC28-205ENST00000469670 CTXND1A0A1B0GTU2 59 aa11.32□□□□□ -0.6
TTC28-205ENST00000469670 CXCL1P09341 107 aa11.32□□□□□ -0.6
TTC28-205ENST00000469670 SMIM17P0DL12 118 aa11.32□□□□□ -0.6
TTC28-205ENST00000469670 SSTP61278 116 aa11.32□□□□□ -0.6
TTC28-205ENST00000469670 HIGD2BQ4VC39 106 aa11.32□□□□□ -0.6
TTC28-205ENST00000469670 TMEM243Q9BU79 118 aa11.32□□□□□ -0.6
TTC28-205ENST00000469670 SSBP4Q9BWG4 385 aaPredicted RBP11.32□□□□□ -0.6
TTC28-205ENST00000469670 A0A096LNI7 61 aa11.31□□□□□ -0.6
TTC28-205ENST00000469670 GAGE12HA6NDE8 117 aa11.31□□□□□ -0.6
TTC28-205ENST00000469670 OR5AL1P0C617 328 aa11.3□□□□□ -0.6
TTC28-205ENST00000469670 SULT1A2P50226 295 aa11.3□□□□□ -0.6
TTC28-205ENST00000469670 UPK1BO75841 260 aa11.29□□□□□ -0.6
TTC28-205ENST00000469670 Q6ZRP5 223 aa11.29□□□□□ -0.6
TTC28-205ENST00000469670 INO80EQ8NBZ0 244 aaPredicted RBP11.29□□□□□ -0.6
TTC28-205ENST00000469670 AP1S3Q96PC3 154 aa11.29□□□□□ -0.6
TTC28-205ENST00000469670 M0QY20 66 aa11.28□□□□□ -0.6
TTC28-205ENST00000469670 AKR1C3P42330 323 aa11.28□□□□□ -0.6
TTC28-205ENST00000469670 H7C1H1 209 aa11.27□□□□□ -0.61
TTC28-205ENST00000469670 IFITM3Q01628 133 aa11.27□□□□□ -0.61
TTC28-205ENST00000469670 TCEAL7Q9BRU2 100 aa11.27□□□□□ -0.61
TTC28-205ENST00000469670 LINC00474Q9P2X8 69 aa11.27□□□□□ -0.61
TTC28-205ENST00000469670 UBE2L6O14933 153 aa11.26□□□□□ -0.61
TTC28-205ENST00000469670 MGPP08493 103 aa11.26□□□□□ -0.61
TTC28-205ENST00000469670 NKX2-5P52952 324 aaPredicted RBP11.26□□□□□ -0.61
TTC28-205ENST00000469670 MUC2Q02817 5179 aa11.25□□□□□ -0.61
TTC28-205ENST00000469670 GVQW2A0A096LPI5 108 aaPredicted RBP11.25□□□□□ -0.61
TTC28-205ENST00000469670 IGKV3OR2-268A0A0C4DH90 116 aa11.25□□□□□ -0.61
TTC28-205ENST00000469670 FHITP49789 147 aa11.25□□□□□ -0.61
TTC28-205ENST00000469670 CST9LP1Q5W188 147 aa11.25□□□□□ -0.61
TTC28-205ENST00000469670 RPL7L1Q6DKI1 246 aaKnown RBP11.25□□□□□ -0.61
TTC28-205ENST00000469670 SUMO4Q6EEV6 95 aa11.25□□□□□ -0.61
TTC28-205ENST00000469670 STOML3Q8TAV4 291 aa11.25□□□□□ -0.61
TTC28-205ENST00000469670 FAM231BA6NCW3 169 aa11.24□□□□□ -0.61
TTC28-205ENST00000469670 PGLYRP4Q96LB8 373 aa11.24□□□□□ -0.61
TTC28-205ENST00000469670 MAP1LC3B2A6NCE7 125 aa11.23□□□□□ -0.61
TTC28-205ENST00000469670 MLST8Q9BVC4 326 aa11.23□□□□□ -0.61
TTC28-205ENST00000469670 MAP1LC3BQ9GZQ8 125 aa11.23□□□□□ -0.61
TTC28-205ENST00000469670 BORCS7-ASMTA0A0B4J1R7 106 aa11.22□□□□□ -0.61
TTC28-205ENST00000469670 AMTP48728 403 aa11.22□□□□□ -0.61
TTC28-205ENST00000469670 AKR1C8PQ5T2L2 129 aa11.22□□□□□ -0.61
TTC28-205ENST00000469670 CHCHD10Q8WYQ3 142 aaPredicted RBP11.22□□□□□ -0.61
TTC28-205ENST00000469670 PKIGQ9Y2B9 76 aa11.22□□□□□ -0.61
TTC28-205ENST00000469670 S100A9P06702 114 aaKnown RBP11.21□□□□□ -0.61
TTC28-205ENST00000469670 RGS21Q2M5E4 152 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms