RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 Q6ZTI0 123 aa4.35□□□□□ -1.71
PTCD3-208ENST00000469585 TPPP3Q9BW30 176 aa4.35□□□□□ -1.71
PTCD3-208ENST00000469585 HHLA3Q9XRX5 114 aa4.35□□□□□ -1.71
PTCD3-208ENST00000469585 STAB2Q8WWQ8 2551 aa4.35□□□□□ -1.71
PTCD3-208ENST00000469585 TRAV9-2A0A087WT02 112 aa4.34□□□□□ -1.71
PTCD3-208ENST00000469585 IGHV3-16A0A0C4DH30 117 aa4.34□□□□□ -1.71
PTCD3-208ENST00000469585 A0A0J9YY99 117 aa4.34□□□□□ -1.71
PTCD3-208ENST00000469585 H3BVH4 76 aa4.34□□□□□ -1.71
PTCD3-208ENST00000469585 SH2D1AO60880 128 aa4.34□□□□□ -1.71
PTCD3-208ENST00000469585 IGHV3-53P01767 116 aa4.34□□□□□ -1.71
PTCD3-208ENST00000469585 PRM2P04554 102 aa4.34□□□□□ -1.71
PTCD3-208ENST00000469585 KRTAP10-6P60371 365 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-208ENST00000469585 RHOHQ15669 191 aa4.34□□□□□ -1.71
PTCD3-208ENST00000469585 CENPWQ5EE01 88 aa4.34□□□□□ -1.71
PTCD3-208ENST00000469585 TTC32Q5I0X7 151 aa4.34□□□□□ -1.71
PTCD3-208ENST00000469585 PRR9Q5T870 116 aa4.34□□□□□ -1.71
PTCD3-208ENST00000469585 POM121L12Q8N7R1 296 aa4.34□□□□□ -1.71
PTCD3-208ENST00000469585 C15orf54Q8N8G6 183 aa4.34□□□□□ -1.71
PTCD3-208ENST00000469585 C11orf72Q8NBR9 251 aa4.34□□□□□ -1.71
PTCD3-208ENST00000469585 RASL10AQ92737 203 aa4.34□□□□□ -1.71
PTCD3-208ENST00000469585 C18orf15Q96N68 181 aa4.34□□□□□ -1.71
PTCD3-208ENST00000469585 IL36BQ9NZH7 164 aa4.34□□□□□ -1.71
PTCD3-208ENST00000469585 TP53TG3Q9ULZ0 132 aa4.34□□□□□ -1.71
PTCD3-208ENST00000469585 COL7A1Q02388 2944 aa4.34□□□□□ -1.72
PTCD3-208ENST00000469585 TMSB15BA0A087X1C1 80 aa4.33□□□□□ -1.72
PTCD3-208ENST00000469585 A0A1B0GVG6 124 aa4.33□□□□□ -1.72
PTCD3-208ENST00000469585 F2Z2F3 143 aa4.33□□□□□ -1.72
PTCD3-208ENST00000469585 H7C1H1 209 aa4.33□□□□□ -1.72
PTCD3-208ENST00000469585 M0R381 172 aa4.33□□□□□ -1.72
PTCD3-208ENST00000469585 GNRH2O43555 120 aa4.33□□□□□ -1.72
PTCD3-208ENST00000469585 FAM74A3Q4VXF1 159 aa4.33□□□□□ -1.72
PTCD3-208ENST00000469585 FAM74A4Q5TZK3 123 aa4.33□□□□□ -1.72
PTCD3-208ENST00000469585 TEX261Q6UWH6 196 aa4.33□□□□□ -1.72
PTCD3-208ENST00000469585 NEGR1Q7Z3B1 354 aa4.33□□□□□ -1.72
PTCD3-208ENST00000469585 Q8N377 158 aa4.33□□□□□ -1.72
PTCD3-208ENST00000469585 OR2D3Q8NGH3 330 aa4.33□□□□□ -1.72
PTCD3-208ENST00000469585 ZC2HC1AQ96GY0 325 aa4.33□□□□□ -1.72
PTCD3-208ENST00000469585 SMIM7Q9BQ49 75 aa4.33□□□□□ -1.72
PTCD3-208ENST00000469585 SMDT1Q9H4I9 107 aa4.33□□□□□ -1.72
PTCD3-208ENST00000469585 APLNQ9ULZ1 77 aa4.33□□□□□ -1.72
PTCD3-208ENST00000469585 CMYA5Q8N3K9 4069 aa4.32□□□□□ -1.72
PTCD3-208ENST00000469585 TENM3Q9P273 2699 aa4.32□□□□□ -1.72
PTCD3-208ENST00000469585 IGLV4-3A0A075B6K6 122 aa4.32□□□□□ -1.72
PTCD3-208ENST00000469585 TRAV8-6A0A0B4J262 113 aa4.32□□□□□ -1.72
PTCD3-208ENST00000469585 PLAC8L1A1L4L8 177 aa4.32□□□□□ -1.72
PTCD3-208ENST00000469585 ZNF727A8MUV8 499 aa4.32□□□□□ -1.72
PTCD3-208ENST00000469585 KRBOX1C9JBD0 128 aa4.32□□□□□ -1.72
PTCD3-208ENST00000469585 NDUFS6O75380 124 aaKnown RBP4.32□□□□□ -1.72
PTCD3-208ENST00000469585 CXCL1P09341 107 aa4.32□□□□□ -1.72
PTCD3-208ENST00000469585 TRGC1P0CF51 173 aa4.32□□□□□ -1.72
PTCD3-208ENST00000469585 CACNG7P62955 275 aa4.32□□□□□ -1.72
PTCD3-208ENST00000469585 ZNF56Q15929 161 aa4.32□□□□□ -1.72
PTCD3-208ENST00000469585 ZNF506Q5JVG8 444 aa4.32□□□□□ -1.72
PTCD3-208ENST00000469585 CD164L2Q6UWJ8 174 aa4.32□□□□□ -1.72
PTCD3-208ENST00000469585 ZFP2Q6ZN57 461 aa4.32□□□□□ -1.72
PTCD3-208ENST00000469585 FER1L6-AS1Q8NA97 138 aa4.32□□□□□ -1.72
PTCD3-208ENST00000469585 PTH2Q96A98 100 aa4.32□□□□□ -1.72
PTCD3-208ENST00000469585 TVP23CQ96ET8 276 aa4.32□□□□□ -1.72
PTCD3-208ENST00000469585 AP1S3Q96PC3 154 aa4.32□□□□□ -1.72
PTCD3-208ENST00000469585 URGCP-MRPS24S4R325 110 aa4.32□□□□□ -1.72
PTCD3-208ENST00000469585 TRBV6-4A0A1B0GX49 114 aa4.31□□□□□ -1.72
PTCD3-208ENST00000469585 GRIFINA4D1Z8 144 aa4.31□□□□□ -1.72
PTCD3-208ENST00000469585 A8MWL6 223 aa4.31□□□□□ -1.72
PTCD3-208ENST00000469585 SFTA3P0C7M3 94 aa4.31□□□□□ -1.72
PTCD3-208ENST00000469585 ARMS2P0C7Q2 107 aa4.31□□□□□ -1.72
PTCD3-208ENST00000469585 ZNF80P51504 273 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-208ENST00000469585 RPL19P84098 196 aaKnown RBP4.31□□□□□ -1.72
PTCD3-208ENST00000469585 RIGQ13278 110 aa4.31□□□□□ -1.72
PTCD3-208ENST00000469585 LINC00612Q8N6U2 182 aa4.31□□□□□ -1.72
PTCD3-208ENST00000469585 C9orf85Q96MD7 179 aa4.31□□□□□ -1.72
PTCD3-208ENST00000469585 FAM210AQ96ND0 272 aa4.31□□□□□ -1.72
PTCD3-208ENST00000469585 LY96Q9Y6Y9 160 aa4.31□□□□□ -1.72
PTCD3-208ENST00000469585 A0A087WWC5 75 aa4.3□□□□□ -1.72
PTCD3-208ENST00000469585 K7EP13 123 aa4.3□□□□□ -1.72
PTCD3-208ENST00000469585 GATCO43716 136 aaKnown RBP4.3□□□□□ -1.72
PTCD3-208ENST00000469585 OR5AL1P0C617 328 aa4.3□□□□□ -1.72
PTCD3-208ENST00000469585 EVI2AP22794 236 aa4.3□□□□□ -1.72
PTCD3-208ENST00000469585 CRYBA4P53673 196 aa4.3□□□□□ -1.72
PTCD3-208ENST00000469585 NDUFV3P56181 108 aaKnown RBP4.3□□□□□ -1.72
PTCD3-208ENST00000469585 PKIAP61925 76 aa4.3□□□□□ -1.72
PTCD3-208ENST00000469585 TMEM241Q24JQ0 296 aa4.3□□□□□ -1.72
PTCD3-208ENST00000469585 OR10J3Q5JRS4 329 aa4.3□□□□□ -1.72
PTCD3-208ENST00000469585 DNLZQ5SXM8 178 aa4.3□□□□□ -1.72
PTCD3-208ENST00000469585 CFAP126Q5VTH2 177 aa4.3□□□□□ -1.72
PTCD3-208ENST00000469585 C10orf126Q8N4M7 172 aa4.3□□□□□ -1.72
PTCD3-208ENST00000469585 DERL1Q9BUN8 251 aa4.3□□□□□ -1.72
PTCD3-208ENST00000469585 RPP21Q9H633 154 aaKnown RBP4.3□□□□□ -1.72
PTCD3-208ENST00000469585 PRKDCP78527 4128 aaKnown RBP4.29□□□□□ -1.72
PTCD3-208ENST00000469585 IGHV3-73A0A0B4J1V6 119 aa4.29□□□□□ -1.72
PTCD3-208ENST00000469585 IGKV3D-20A0A0C4DH25 116 aa4.29□□□□□ -1.72
PTCD3-208ENST00000469585 RAB19A4D1S5 217 aa4.29□□□□□ -1.72
PTCD3-208ENST00000469585 SIVA1O15304 175 aa4.29□□□□□ -1.72
PTCD3-208ENST00000469585 RS1O15537 224 aa4.29□□□□□ -1.72
PTCD3-208ENST00000469585 S100A8P05109 93 aa4.29□□□□□ -1.72
PTCD3-208ENST00000469585 MGPP08493 103 aa4.29□□□□□ -1.72
PTCD3-208ENST00000469585 RNASE3P12724 160 aaKnown RBP4.29□□□□□ -1.72
PTCD3-208ENST00000469585 RAB4BP61018 213 aa4.29□□□□□ -1.72
PTCD3-208ENST00000469585 SSTP61278 116 aa4.29□□□□□ -1.72
PTCD3-208ENST00000469585 ADIRFQ15847 76 aa4.29□□□□□ -1.72
PTCD3-208ENST00000469585 TMEM97Q5BJF2 176 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms