RNA–Protein interactions for RNA: ENST00000469403.1

AGRN-205, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 899 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-205ENST00000469403 RPL36AP83881 106 aaKnown RBP18.34■□□□□ 0.53
AGRN-205ENST00000469403 COX19Q49B96 90 aa18.34■□□□□ 0.53
AGRN-205ENST00000469403 NEGR1Q7Z3B1 354 aa18.34■□□□□ 0.53
AGRN-205ENST00000469403 RPL36ALQ969Q0 106 aaKnown RBP18.34■□□□□ 0.53
AGRN-205ENST00000469403 S100A1P23297 94 aa18.33■□□□□ 0.52
AGRN-205ENST00000469403 MRPL51Q4U2R6 128 aaKnown RBP18.33■□□□□ 0.52
AGRN-205ENST00000469403 NIT2Q9NQR4 276 aa18.33■□□□□ 0.52
AGRN-205ENST00000469403 TRAV26-2A0A0B4J265 109 aa18.32■□□□□ 0.52
AGRN-205ENST00000469403 GAGE12JA6NER3 117 aa18.32■□□□□ 0.52
AGRN-205ENST00000469403 GAGE1Q13065 139 aa18.32■□□□□ 0.52
AGRN-205ENST00000469403 GAGE4Q13068 117 aa18.32■□□□□ 0.52
AGRN-205ENST00000469403 GAGE5Q13069 117 aa18.32■□□□□ 0.52
AGRN-205ENST00000469403 GAGE13Q4V321 117 aa18.32■□□□□ 0.52
AGRN-205ENST00000469403 TMEM136Q6ZRR5 245 aa18.32■□□□□ 0.52
AGRN-205ENST00000469403 ATP6V1G1O75348 118 aa18.31■□□□□ 0.52
AGRN-205ENST00000469403 UBE2D3P61077 147 aa18.31■□□□□ 0.52
AGRN-205ENST00000469403 UBE2D2P62837 147 aa18.31■□□□□ 0.52
AGRN-205ENST00000469403 ZNRF2Q8NHG8 242 aa18.31■□□□□ 0.52
AGRN-205ENST00000469403 GNB1LQ9BYB4 327 aa18.31■□□□□ 0.52
AGRN-205ENST00000469403 TGIF2-C20orf24A0A0A6YYL0 155 aa18.3■□□□□ 0.52
AGRN-205ENST00000469403 TIRAPP58753 221 aa18.3■□□□□ 0.52
AGRN-205ENST00000469403 CBLN2Q8IUK8 224 aa18.3■□□□□ 0.52
AGRN-205ENST00000469403 ATP6V0E2Q8NHE4 81 aa18.29■□□□□ 0.52
AGRN-205ENST00000469403 TRBV6-5A0A0K0K1A5 114 aa18.28■□□□□ 0.52
AGRN-205ENST00000469403 HLA-DQA1P01909 254 aa18.28■□□□□ 0.52
AGRN-205ENST00000469403 PPBPP02775 128 aa18.28■□□□□ 0.52
AGRN-205ENST00000469403 TNFRSF18Q9Y5U5 241 aa18.28■□□□□ 0.52
AGRN-205ENST00000469403 GAS8-AS1O95177 125 aa18.27■□□□□ 0.52
AGRN-205ENST00000469403 PPP1R17O96001 155 aa18.27■□□□□ 0.52
AGRN-205ENST00000469403 ESRGQ1W209 222 aa18.27■□□□□ 0.52
AGRN-205ENST00000469403 LGALS9CQ6DKI2 356 aa18.27■□□□□ 0.52
AGRN-205ENST00000469403 LYPD5Q6UWN5 251 aa18.27■□□□□ 0.52
AGRN-205ENST00000469403 PLECQ15149 4684 aaKnown RBP18.27■□□□□ 0.51
AGRN-205ENST00000469403 MT-ND6P03923 174 aa18.26■□□□□ 0.51
AGRN-205ENST00000469403 CCL18P55774 89 aa18.26■□□□□ 0.51
AGRN-205ENST00000469403 RPL39LQ96EH5 51 aaKnown RBP18.26■□□□□ 0.51
AGRN-205ENST00000469403 GTSF1LQ9H1H1 148 aa18.26■□□□□ 0.51
AGRN-205ENST00000469403 CKS2P33552 79 aa18.25■□□□□ 0.51
AGRN-205ENST00000469403 NRACQ8N912 160 aa18.25■□□□□ 0.51
AGRN-205ENST00000469403 SMKR1H3BMG3 65 aa18.24■□□□□ 0.51
AGRN-205ENST00000469403 RPS10P46783 165 aaKnown RBP18.24■□□□□ 0.51
AGRN-205ENST00000469403 OR10J3Q5JRS4 329 aa18.24■□□□□ 0.51
AGRN-205ENST00000469403 DAZ4Q86SG3 579 aaKnown RBP18.24■□□□□ 0.51
AGRN-205ENST00000469403 DAZ3Q9NR90 486 aaKnown RBP18.24■□□□□ 0.51
AGRN-205ENST00000469403 NCR2O95944 276 aa18.23■□□□□ 0.51
AGRN-205ENST00000469403 LINC00588Q9Y4M8 146 aa18.23■□□□□ 0.51
AGRN-205ENST00000469403 D6R8Y8 96 aa18.22■□□□□ 0.51
AGRN-205ENST00000469403 PHOX2AO14813 284 aa18.22■□□□□ 0.51
AGRN-205ENST00000469403 ORMDL3Q8N138 153 aa18.22■□□□□ 0.51
AGRN-205ENST00000469403 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.22■□□□□ 0.51
AGRN-205ENST00000469403 MRPS16Q9Y3D3 137 aaKnown RBP18.22■□□□□ 0.51
AGRN-205ENST00000469403 APCSP02743 223 aa18.21■□□□□ 0.51
AGRN-205ENST00000469403 LINC00476Q8WZB0 136 aa18.21■□□□□ 0.51
AGRN-205ENST00000469403 C20orf78Q9BR46 151 aa18.2■□□□□ 0.5
AGRN-205ENST00000469403 UPK3BQ9BT76 320 aa18.2■□□□□ 0.5
AGRN-205ENST00000469403 ST20Q9HBF5 79 aa18.2■□□□□ 0.5
AGRN-205ENST00000469403 LAMTOR2Q9Y2Q5 125 aa18.2■□□□□ 0.5
AGRN-205ENST00000469403 SDHAF1A6NFY7 115 aa18.19■□□□□ 0.5
AGRN-205ENST00000469403 TNFRSF6BO95407 300 aa18.19■□□□□ 0.5
AGRN-205ENST00000469403 TMEM97Q5BJF2 176 aa18.19■□□□□ 0.5
AGRN-205ENST00000469403 POLR2KP53803 58 aaKnown RBP18.18■□□□□ 0.5
AGRN-205ENST00000469403 RPL32P62910 135 aaKnown RBP18.18■□□□□ 0.5
AGRN-205ENST00000469403 LELP1Q5T871 98 aa18.18■□□□□ 0.5
AGRN-205ENST00000469403 PRELID3AQ96N28 172 aa18.18■□□□□ 0.5
AGRN-205ENST00000469403 TMEM70Q9BUB7 260 aa18.18■□□□□ 0.5
AGRN-205ENST00000469403 MRPL18Q9H0U6 180 aaKnown RBP18.18■□□□□ 0.5
AGRN-205ENST00000469403 SCO1O75880 301 aa18.17■□□□□ 0.5
AGRN-205ENST00000469403 SUMO2P61956 95 aaKnown RBP18.17■□□□□ 0.5
AGRN-205ENST00000469403 UBE2DNLQ8IWF7 75 aa18.17■□□□□ 0.5
AGRN-205ENST00000469403 IGHV3-38A0A0C4DH36 116 aa18.16■□□□□ 0.5
AGRN-205ENST00000469403 TRBV27A0A0K0K1C4 114 aa18.16■□□□□ 0.5
AGRN-205ENST00000469403 COLCA2A8K830 154 aa18.16■□□□□ 0.5
AGRN-205ENST00000469403 NPYP01303 97 aa18.16■□□□□ 0.5
AGRN-205ENST00000469403 TRAPPC1Q9Y5R8 145 aa18.15■□□□□ 0.5
AGRN-205ENST00000469403 PRSS47A8MTI9 375 aa18.14■□□□□ 0.49
AGRN-205ENST00000469403 ALMS1Q8TCU4 4167 aa18.13■□□□□ 0.49
AGRN-205ENST00000469403 TRBV6-8A0A0A6YYG3 113 aa18.13■□□□□ 0.49
AGRN-205ENST00000469403 LCE6AA0A183 80 aa18.13■□□□□ 0.49
AGRN-205ENST00000469403 I3L3M4 83 aa18.13■□□□□ 0.49
AGRN-205ENST00000469403 VCYO14598 125 aa18.13■□□□□ 0.49
AGRN-205ENST00000469403 FABP9Q0Z7S8 132 aa18.13■□□□□ 0.49
AGRN-205ENST00000469403 NTM-AS1Q6ZSK4 140 aa18.13■□□□□ 0.49
AGRN-205ENST00000469403 LY6G6CO95867 125 aa18.12■□□□□ 0.49
AGRN-205ENST00000469403 KIAA1644Q3SXP7 199 aa18.12■□□□□ 0.49
AGRN-205ENST00000469403 TRAV8-6A0A0B4J262 113 aa18.11■□□□□ 0.49
AGRN-205ENST00000469403 COTL1Q14019 142 aa18.11■□□□□ 0.49
AGRN-205ENST00000469403 IQCJQ1A5X6 159 aa18.11■□□□□ 0.49
AGRN-205ENST00000469403 ALKBH7Q9BT30 221 aaPredicted RBP18.11■□□□□ 0.49
AGRN-205ENST00000469403 PMCHP20382 165 aa18.1■□□□□ 0.49
AGRN-205ENST00000469403 SMIM2Q9BVW6 85 aa18.1■□□□□ 0.49
AGRN-205ENST00000469403 VPS13DQ5THJ4 4388 aa18.08■□□□□ 0.48
AGRN-205ENST00000469403 RAB5AP20339 215 aa18.08■□□□□ 0.48
AGRN-205ENST00000469403 MAP1LC3AQ9H492 121 aa18.08■□□□□ 0.48
AGRN-205ENST00000469403 TRBV25-1A0A075B6N4 114 aa18.07■□□□□ 0.48
AGRN-205ENST00000469403 IGHV1-24A0A0C4DH33 117 aa18.07■□□□□ 0.48
AGRN-205ENST00000469403 TSHBP01222 138 aa18.07■□□□□ 0.48
AGRN-205ENST00000469403 WFDC10BQ8IUB3 73 aa18.07■□□□□ 0.48
AGRN-205ENST00000469403 Q9H8V8 135 aa18.07■□□□□ 0.48
AGRN-205ENST00000469403 SIVA1O15304 175 aa18.06■□□□□ 0.48
AGRN-205ENST00000469403 KIR2DL4Q99706 377 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms