RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 M0R1W7 72 aa6.69□□□□□ -1.34
SMARCE1-207ENST00000469334 PSMB8P28062 276 aa6.69□□□□□ -1.34
SMARCE1-207ENST00000469334 PLCE1Q9P212 2302 aa6.69□□□□□ -1.34
SMARCE1-207ENST00000469334 WDR87Q6ZQQ6 2873 aa6.68□□□□□ -1.34
SMARCE1-207ENST00000469334 IGHV3OR16-8A0A075B7F1 116 aa6.68□□□□□ -1.34
SMARCE1-207ENST00000469334 TINCRA0A1B0GVN0 87 aa6.68□□□□□ -1.34
SMARCE1-207ENST00000469334 F5H697 171 aa6.68□□□□□ -1.34
SMARCE1-207ENST00000469334 DNAL4O96015 105 aa6.68□□□□□ -1.34
SMARCE1-207ENST00000469334 NPC2P61916 151 aa6.68□□□□□ -1.34
SMARCE1-207ENST00000469334 KLRB1Q12918 225 aa6.68□□□□□ -1.34
SMARCE1-207ENST00000469334 CIRBPQ14011 172 aaKnown RBP6.68□□□□□ -1.34
SMARCE1-207ENST00000469334 Q6ZSV7 163 aa6.68□□□□□ -1.34
SMARCE1-207ENST00000469334 LY6G5BQ8NDX9 201 aa6.68□□□□□ -1.34
SMARCE1-207ENST00000469334 MUC4Q99102 2169 aa6.68□□□□□ -1.34
SMARCE1-207ENST00000469334 ADARB2-AS1A8MUL3 147 aa6.68□□□□□ -1.34
SMARCE1-207ENST00000469334 EPM2AB3EWF7 344 aa6.68□□□□□ -1.34
SMARCE1-207ENST00000469334 USP17L23D6RBM5 183 aa6.68□□□□□ -1.34
SMARCE1-207ENST00000469334 OPRPNQ99935 248 aaPredicted RBP6.68□□□□□ -1.34
SMARCE1-207ENST00000469334 ZNF580Q9UK33 172 aa6.68□□□□□ -1.34
SMARCE1-207ENST00000469334 LAMA1P25391 3075 aa6.68□□□□□ -1.34
SMARCE1-207ENST00000469334 NDUFA1O15239 70 aa6.67□□□□□ -1.34
SMARCE1-207ENST00000469334 GNRH2O43555 120 aa6.67□□□□□ -1.34
SMARCE1-207ENST00000469334 PFN2P35080 140 aa6.67□□□□□ -1.34
SMARCE1-207ENST00000469334 C15orf32Q32M92 178 aa6.67□□□□□ -1.34
SMARCE1-207ENST00000469334 RNF152Q8N8N0 203 aa6.67□□□□□ -1.34
SMARCE1-207ENST00000469334 IGHV3-35A0A0C4DH35 117 aa6.67□□□□□ -1.34
SMARCE1-207ENST00000469334 IGHV3-66A0A0C4DH42 116 aa6.67□□□□□ -1.34
SMARCE1-207ENST00000469334 IGF1P05019 195 aa6.67□□□□□ -1.34
SMARCE1-207ENST00000469334 CD28P10747 220 aa6.67□□□□□ -1.34
SMARCE1-207ENST00000469334 PRIMA1Q86XR5 153 aa6.67□□□□□ -1.34
SMARCE1-207ENST00000469334 DEFB123Q8N688 67 aa6.67□□□□□ -1.34
SMARCE1-207ENST00000469334 Q8N6K4 173 aa6.67□□□□□ -1.34
SMARCE1-207ENST00000469334 C20orf173Q96LM9 149 aa6.67□□□□□ -1.34
SMARCE1-207ENST00000469334 PRORYQ9H606 182 aa6.67□□□□□ -1.34
SMARCE1-207ENST00000469334 C22orf24Q9Y442 160 aa6.67□□□□□ -1.34
SMARCE1-207ENST00000469334 SERP1Q9Y6X1 66 aa6.67□□□□□ -1.34
SMARCE1-207ENST00000469334 BDP1A6H8Y1 2624 aa6.66□□□□□ -1.34
SMARCE1-207ENST00000469334 J3QLI3 93 aa6.66□□□□□ -1.34
SMARCE1-207ENST00000469334 M0QY20 66 aa6.66□□□□□ -1.34
SMARCE1-207ENST00000469334 IGFL2Q6UWQ7 119 aa6.66□□□□□ -1.34
SMARCE1-207ENST00000469334 RNASE6Q93091 150 aaKnown RBP6.66□□□□□ -1.34
SMARCE1-207ENST00000469334 ICE1Q9Y2F5 2266 aa6.66□□□□□ -1.34
SMARCE1-207ENST00000469334 TRAV12-2A0A075B6T6 113 aa6.65□□□□□ -1.34
SMARCE1-207ENST00000469334 TRAV12-3A0A0B4J271 114 aa6.65□□□□□ -1.34
SMARCE1-207ENST00000469334 PATE3B3GLJ2 98 aa6.65□□□□□ -1.34
SMARCE1-207ENST00000469334 RPL11P62913 178 aaKnown RBP6.65□□□□□ -1.34
SMARCE1-207ENST00000469334 ATP5EP2Q5VTU8 51 aa6.65□□□□□ -1.34
SMARCE1-207ENST00000469334 LINC00308Q8TCZ7 52 aa6.65□□□□□ -1.34
SMARCE1-207ENST00000469334 CCDC140Q96MF4 163 aa6.65□□□□□ -1.34
SMARCE1-207ENST00000469334 IGHV7-81A0A0B4J1V7 117 aa6.65□□□□□ -1.35
SMARCE1-207ENST00000469334 ODF3BA8MYP8 253 aa6.65□□□□□ -1.35
SMARCE1-207ENST00000469334 PRB3Q04118 309 aaPredicted RBP6.65□□□□□ -1.35
SMARCE1-207ENST00000469334 C9orf85Q96MD7 179 aa6.65□□□□□ -1.35
SMARCE1-207ENST00000469334 AHCTF1Q8WYP5 2266 aa6.65□□□□□ -1.35
SMARCE1-207ENST00000469334 A0A087WWL8 130 aa6.64□□□□□ -1.35
SMARCE1-207ENST00000469334 FAM236DA0A1B0GTK5 79 aa6.64□□□□□ -1.35
SMARCE1-207ENST00000469334 A0A1W2PNU3 283 aaPredicted RBP6.64□□□□□ -1.35
SMARCE1-207ENST00000469334 SOCS3O14543 225 aa6.64□□□□□ -1.35
SMARCE1-207ENST00000469334 FAM236CP0DP71 79 aa6.64□□□□□ -1.35
SMARCE1-207ENST00000469334 S100A7L2Q5SY68 101 aa6.64□□□□□ -1.35
SMARCE1-207ENST00000469334 NACAE9PAV3 2078 aa6.64□□□□□ -1.35
SMARCE1-207ENST00000469334 KLLNB2CW77 178 aa6.64□□□□□ -1.35
SMARCE1-207ENST00000469334 PF4P02776 101 aa6.64□□□□□ -1.35
SMARCE1-207ENST00000469334 ATP1A1-AS1Q5TC04 95 aa6.64□□□□□ -1.35
SMARCE1-207ENST00000469334 CLEC19AQ6UXS0 136 aa6.64□□□□□ -1.35
SMARCE1-207ENST00000469334 LINC01561Q8N1V8 128 aa6.64□□□□□ -1.35
SMARCE1-207ENST00000469334 C10orf105Q8TEF2 133 aa6.64□□□□□ -1.35
SMARCE1-207ENST00000469334 OBSCN-AS1Q96MR7 158 aa6.64□□□□□ -1.35
SMARCE1-207ENST00000469334 NCOR1O75376 2440 aa6.63□□□□□ -1.35
SMARCE1-207ENST00000469334 IGHV3OR16-13A0A075B7E8 117 aa6.63□□□□□ -1.35
SMARCE1-207ENST00000469334 IGHV3-74A0A0B4J1X5 117 aa6.63□□□□□ -1.35
SMARCE1-207ENST00000469334 FHL2Q14192 279 aa6.63□□□□□ -1.35
SMARCE1-207ENST00000469334 FAM215AQ9Y5M1 114 aa6.63□□□□□ -1.35
SMARCE1-207ENST00000469334 BCE1O60756 84 aa6.62□□□□□ -1.35
SMARCE1-207ENST00000469334 IGHG2P01859 326 aa6.62□□□□□ -1.35
SMARCE1-207ENST00000469334 FAM27E3Q08E93 113 aa6.62□□□□□ -1.35
SMARCE1-207ENST00000469334 DEFB104AQ8WTQ1 72 aa6.62□□□□□ -1.35
SMARCE1-207ENST00000469334 TMEM243Q9BU79 118 aa6.62□□□□□ -1.35
SMARCE1-207ENST00000469334 UBE2D4Q9Y2X8 147 aa6.62□□□□□ -1.35
SMARCE1-207ENST00000469334 IGLV5-45A0A087WSX0 123 aa6.62□□□□□ -1.35
SMARCE1-207ENST00000469334 IGHV3-49A0A0A0MS15 119 aa6.62□□□□□ -1.35
SMARCE1-207ENST00000469334 IGKV3D-7A0A0C4DH55 119 aa6.62□□□□□ -1.35
SMARCE1-207ENST00000469334 BSPH1Q075Z2 132 aa6.62□□□□□ -1.35
SMARCE1-207ENST00000469334 C22orf34Q6ZV56 151 aa6.62□□□□□ -1.35
SMARCE1-207ENST00000469334 TRIOO75962 3097 aa6.62□□□□□ -1.35
SMARCE1-207ENST00000469334 RPL28P46779 137 aaKnown RBP6.61□□□□□ -1.35
SMARCE1-207ENST00000469334 MINOS1Q5TGZ0 78 aa6.61□□□□□ -1.35
SMARCE1-207ENST00000469334 FAM74A4Q5TZK3 123 aa6.61□□□□□ -1.35
SMARCE1-207ENST00000469334 Q8N2B8 174 aa6.61□□□□□ -1.35
SMARCE1-207ENST00000469334 FAM104AQ969W3 186 aa6.61□□□□□ -1.35
SMARCE1-207ENST00000469334 C1orf43Q9BWL3 253 aa6.61□□□□□ -1.35
SMARCE1-207ENST00000469334 MINOS1-NBL1R4GNA1 71 aa6.61□□□□□ -1.35
SMARCE1-207ENST00000469334 URB1O60287 2271 aaKnown RBP6.61□□□□□ -1.35
SMARCE1-207ENST00000469334 SPEGQ15772 3267 aa6.61□□□□□ -1.35
SMARCE1-207ENST00000469334 WDFY4Q6ZS81 3184 aa6.61□□□□□ -1.35
SMARCE1-207ENST00000469334 RBMY1BA6NDE4 496 aaKnown RBP6.61□□□□□ -1.35
SMARCE1-207ENST00000469334 RBMY1EA6NEQ0 496 aaKnown RBP6.61□□□□□ -1.35
SMARCE1-207ENST00000469334 RBMY1DP0C7P1 496 aaKnown RBP6.61□□□□□ -1.35
SMARCE1-207ENST00000469334 RBMY1A1P0DJD3 496 aaKnown RBP6.61□□□□□ -1.35
SMARCE1-207ENST00000469334 RBMY1CP0DJD4 496 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms