RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 RHOHQ15669 191 aa6.78□□□□□ -1.32
SMC1A-205ENST00000469129 RRN3P1Q2M238 152 aa6.78□□□□□ -1.32
SMC1A-205ENST00000469129 ANK2Q01484 3957 aa6.77□□□□□ -1.33
SMC1A-205ENST00000469129 TRBV27A0A0K0K1C4 114 aa6.77□□□□□ -1.33
SMC1A-205ENST00000469129 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.77□□□□□ -1.33
SMC1A-205ENST00000469129 CIDEAO60543 219 aa6.77□□□□□ -1.33
SMC1A-205ENST00000469129 AZU1P20160 251 aa6.77□□□□□ -1.33
SMC1A-205ENST00000469129 DEFA6Q01524 100 aa6.77□□□□□ -1.33
SMC1A-205ENST00000469129 CFAP126Q5VTH2 177 aa6.77□□□□□ -1.33
SMC1A-205ENST00000469129 SHISA2Q6UWI4 295 aa6.77□□□□□ -1.33
SMC1A-205ENST00000469129 WFDC9Q8NEX5 89 aa6.77□□□□□ -1.33
SMC1A-205ENST00000469129 TOMM6Q96B49 74 aa6.77□□□□□ -1.33
SMC1A-205ENST00000469129 DNAJC30Q96LL9 226 aa6.77□□□□□ -1.33
SMC1A-205ENST00000469129 MRPL16Q9NX20 251 aaKnown RBP6.77□□□□□ -1.33
SMC1A-205ENST00000469129 CYSLTR1Q9Y271 337 aa6.77□□□□□ -1.33
SMC1A-205ENST00000469129 TRGV1A0A0A0MS02 117 aa6.76□□□□□ -1.33
SMC1A-205ENST00000469129 TRAV4A0A0B4J268 109 aa6.76□□□□□ -1.33
SMC1A-205ENST00000469129 LINC00587B1AMM8 73 aa6.76□□□□□ -1.33
SMC1A-205ENST00000469129 GIG44P09565 113 aaPredicted RBP6.76□□□□□ -1.33
SMC1A-205ENST00000469129 APOC4P55056 127 aa6.76□□□□□ -1.33
SMC1A-205ENST00000469129 DAZ2Q13117 558 aaKnown RBP6.76□□□□□ -1.33
SMC1A-205ENST00000469129 UFSP1Q6NVU6 142 aa6.76□□□□□ -1.33
SMC1A-205ENST00000469129 C2orf66Q6UXQ4 117 aa6.76□□□□□ -1.33
SMC1A-205ENST00000469129 C12orf54Q6X4T0 127 aa6.76□□□□□ -1.33
SMC1A-205ENST00000469129 Q6ZN92 141 aa6.76□□□□□ -1.33
SMC1A-205ENST00000469129 ATOH7Q8N100 152 aa6.76□□□□□ -1.33
SMC1A-205ENST00000469129 C3orf56Q8N813 242 aa6.76□□□□□ -1.33
SMC1A-205ENST00000469129 CSNK1G2-AS1Q8NCQ2 148 aa6.76□□□□□ -1.33
SMC1A-205ENST00000469129 KIR2DL5BQ8NHK3 375 aa6.76□□□□□ -1.33
SMC1A-205ENST00000469129 C18orf15Q96N68 181 aa6.76□□□□□ -1.33
SMC1A-205ENST00000469129 ZMAT5Q9UDW3 170 aaKnown RBP6.76□□□□□ -1.33
SMC1A-205ENST00000469129 TRAV12-1A0A0B4J245 112 aa6.75□□□□□ -1.33
SMC1A-205ENST00000469129 SMIM9A6NGZ8 99 aa6.75□□□□□ -1.33
SMC1A-205ENST00000469129 I3L3M4 83 aa6.75□□□□□ -1.33
SMC1A-205ENST00000469129 IGHV3-53P01767 116 aa6.75□□□□□ -1.33
SMC1A-205ENST00000469129 PRSS1P07477 247 aa6.75□□□□□ -1.33
SMC1A-205ENST00000469129 MRPL52Q86TS9 123 aaKnown RBP6.75□□□□□ -1.33
SMC1A-205ENST00000469129 OR4C5Q8NGB2 326 aa6.75□□□□□ -1.33
SMC1A-205ENST00000469129 SCGB3A1Q96QR1 104 aa6.75□□□□□ -1.33
SMC1A-205ENST00000469129 MIEN1Q9BRT3 115 aa6.75□□□□□ -1.33
SMC1A-205ENST00000469129 UQCR10Q9UDW1 63 aa6.75□□□□□ -1.33
SMC1A-205ENST00000469129 TNFRSF18Q9Y5U5 241 aa6.75□□□□□ -1.33
SMC1A-205ENST00000469129 IGLL1P15814 213 aa6.74□□□□□ -1.33
SMC1A-205ENST00000469129 ERASQ7Z444 233 aa6.74□□□□□ -1.33
SMC1A-205ENST00000469129 IGHV3-73A0A0B4J1V6 119 aa6.73□□□□□ -1.33
SMC1A-205ENST00000469129 TRBV10-1A0A0K0K1A3 114 aa6.73□□□□□ -1.33
SMC1A-205ENST00000469129 DPM2O94777 84 aa6.73□□□□□ -1.33
SMC1A-205ENST00000469129 IGLC3P0DOY3 106 aa6.73□□□□□ -1.33
SMC1A-205ENST00000469129 PLNP26678 52 aa6.73□□□□□ -1.33
SMC1A-205ENST00000469129 ODF1Q14990 250 aa6.73□□□□□ -1.33
SMC1A-205ENST00000469129 TMEM141Q96I45 108 aa6.73□□□□□ -1.33
SMC1A-205ENST00000469129 TIMM17AQ99595 171 aa6.73□□□□□ -1.33
SMC1A-205ENST00000469129 OVOL2Q9BRP0 275 aa6.73□□□□□ -1.33
SMC1A-205ENST00000469129 TP53TG1Q9Y2A0 90 aa6.73□□□□□ -1.33
SMC1A-205ENST00000469129 A0A087WX48 190 aa6.72□□□□□ -1.33
SMC1A-205ENST00000469129 K7EQD1 137 aa6.72□□□□□ -1.33
SMC1A-205ENST00000469129 TSHBP01222 138 aa6.72□□□□□ -1.33
SMC1A-205ENST00000469129 IGKCP01834 107 aa6.72□□□□□ -1.33
SMC1A-205ENST00000469129 PRM2P04554 102 aa6.72□□□□□ -1.33
SMC1A-205ENST00000469129 Q6ZTI0 123 aa6.72□□□□□ -1.33
SMC1A-205ENST00000469129 NEGR1Q7Z3B1 354 aa6.72□□□□□ -1.33
SMC1A-205ENST00000469129 PMCHL2Q9BQD1 86 aa6.72□□□□□ -1.33
SMC1A-205ENST00000469129 NOP10Q9NPE3 64 aaKnown RBP6.72□□□□□ -1.33
SMC1A-205ENST00000469129 TRGV2A0A075B6R0 118 aa6.71□□□□□ -1.34
SMC1A-205ENST00000469129 hDV102S1A0JD36 115 aa6.71□□□□□ -1.34
SMC1A-205ENST00000469129 PLAC8L1A1L4L8 177 aa6.71□□□□□ -1.34
SMC1A-205ENST00000469129 F8VRH5 84 aa6.71□□□□□ -1.34
SMC1A-205ENST00000469129 NPSP0C0P6 89 aa6.71□□□□□ -1.34
SMC1A-205ENST00000469129 HNRNPA3P51991 378 aaKnown RBP6.71□□□□□ -1.34
SMC1A-205ENST00000469129 RPL36AP83881 106 aaKnown RBP6.71□□□□□ -1.34
SMC1A-205ENST00000469129 PAPPA-AS1Q5QFB9 102 aa6.71□□□□□ -1.34
SMC1A-205ENST00000469129 NEXN-AS1Q8NBZ9 246 aa6.71□□□□□ -1.34
SMC1A-205ENST00000469129 RPL36ALQ969Q0 106 aaKnown RBP6.71□□□□□ -1.34
SMC1A-205ENST00000469129 ZMAT4Q9H898 229 aa6.71□□□□□ -1.34
SMC1A-205ENST00000469129 SMAGPQ0VAQ4 97 aa6.7□□□□□ -1.34
SMC1A-205ENST00000469129 COTL1Q14019 142 aa6.7□□□□□ -1.34
SMC1A-205ENST00000469129 MAJINQ3KP22 176 aa6.7□□□□□ -1.34
SMC1A-205ENST00000469129 LBHQ53QV2 105 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-205ENST00000469129 SLC25A34Q6PIV7 304 aa6.7□□□□□ -1.34
SMC1A-205ENST00000469129 C20orf203Q8NBC4 194 aa6.7□□□□□ -1.34
SMC1A-205ENST00000469129 BAALCQ8WXS3 180 aa6.7□□□□□ -1.34
SMC1A-205ENST00000469129 DKK2Q9UBU2 259 aa6.7□□□□□ -1.34
SMC1A-205ENST00000469129 CHTOPQ9Y3Y2 248 aaKnown RBP6.7□□□□□ -1.34
SMC1A-205ENST00000469129 TENM1Q9UKZ4 2725 aa6.69□□□□□ -1.34
SMC1A-205ENST00000469129 TRBV6-4A0A1B0GX49 114 aa6.69□□□□□ -1.34
SMC1A-205ENST00000469129 GAGE12BA1L429 117 aa6.69□□□□□ -1.34
SMC1A-205ENST00000469129 LYRM9A8MSI8 78 aa6.69□□□□□ -1.34
SMC1A-205ENST00000469129 GAGE7O76087 117 aa6.69□□□□□ -1.34
SMC1A-205ENST00000469129 GAGE12FP0CL80 117 aa6.69□□□□□ -1.34
SMC1A-205ENST00000469129 GAGE12GP0CL81 117 aa6.69□□□□□ -1.34
SMC1A-205ENST00000469129 GAGE12IP0CL82 117 aa6.69□□□□□ -1.34
SMC1A-205ENST00000469129 P0DMU3 169 aa6.69□□□□□ -1.34
SMC1A-205ENST00000469129 FAM231AP0DMU4 169 aa6.69□□□□□ -1.34
SMC1A-205ENST00000469129 FAM231CP0DMU5 169 aa6.69□□□□□ -1.34
SMC1A-205ENST00000469129 C14orf144Q96I85 54 aa6.69□□□□□ -1.34
SMC1A-205ENST00000469129 ZNF479Q96JC4 524 aa6.69□□□□□ -1.34
SMC1A-205ENST00000469129 MRPL35Q9NZE8 188 aaKnown RBP6.69□□□□□ -1.34
SMC1A-205ENST00000469129 TRBV7-3A0A075B6L6 115 aa6.68□□□□□ -1.34
SMC1A-205ENST00000469129 TRGV4A0A0C4DH28 118 aa6.68□□□□□ -1.34
SMC1A-205ENST00000469129 IGIPA6NJ69 53 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms