RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 NDUFA2O43678 99 aa1.76□□□□□ -2.13
LSM5-209ENST00000468872 TRGC1P0CF51 173 aa1.76□□□□□ -2.13
LSM5-209ENST00000468872 ZNF705BP0CI00 300 aaPredicted RBP1.76□□□□□ -2.13
LSM5-209ENST00000468872 AKR1C3P42330 323 aa1.76□□□□□ -2.13
LSM5-209ENST00000468872 TMBIM6P55061 237 aa1.76□□□□□ -2.13
LSM5-209ENST00000468872 CKS1BP61024 79 aa1.76□□□□□ -2.13
LSM5-209ENST00000468872 SMIM21Q3B7S5 101 aa1.76□□□□□ -2.13
LSM5-209ENST00000468872 Q8IYB0 196 aa1.76□□□□□ -2.13
LSM5-209ENST00000468872 OR8J3Q8NGG0 315 aa1.76□□□□□ -2.13
LSM5-209ENST00000468872 ZNF418Q8TF45 676 aaPredicted RBP1.76□□□□□ -2.13
LSM5-209ENST00000468872 TCEAL2Q9H3H9 227 aaPredicted RBP1.76□□□□□ -2.13
LSM5-209ENST00000468872 TMEM138Q9NPI0 162 aa1.76□□□□□ -2.13
LSM5-209ENST00000468872 HS3ST2Q9Y278 367 aa1.76□□□□□ -2.13
LSM5-209ENST00000468872 MED12Q93074 2177 aa1.76□□□□□ -2.13
LSM5-209ENST00000468872 MUC12Q9UKN1 5478 aa1.76□□□□□ -2.13
LSM5-209ENST00000468872 BORCS7-ASMTA0A0B4J1R7 106 aa1.75□□□□□ -2.13
LSM5-209ENST00000468872 LOC107984640A0A0U1RRK4 108 aa1.75□□□□□ -2.13
LSM5-209ENST00000468872 B4DSR2 109 aa1.75□□□□□ -2.13
LSM5-209ENST00000468872 SDC4P31431 198 aa1.75□□□□□ -2.13
LSM5-209ENST00000468872 ZNF345Q14585 488 aa1.75□□□□□ -2.13
LSM5-209ENST00000468872 CCDC153Q494R4 210 aa1.75□□□□□ -2.13
LSM5-209ENST00000468872 MORN2Q502X0 79 aa1.75□□□□□ -2.13
LSM5-209ENST00000468872 ZNF826PQ6ZT77 177 aa1.75□□□□□ -2.13
LSM5-209ENST00000468872 C7orf65Q6ZTY9 151 aa1.75□□□□□ -2.13
LSM5-209ENST00000468872 AAED1Q7RTV5 226 aa1.75□□□□□ -2.13
LSM5-209ENST00000468872 LRRC18Q8N456 261 aa1.75□□□□□ -2.13
LSM5-209ENST00000468872 SLC30A7Q8NEW0 376 aa1.75□□□□□ -2.13
LSM5-209ENST00000468872 ADAT1Q9BUB4 502 aaKnown RBP1.75□□□□□ -2.13
LSM5-209ENST00000468872 NPCDR1Q9BY65 106 aa1.75□□□□□ -2.13
LSM5-209ENST00000468872 IGHV1-58A0A0C4DH39 117 aa1.74□□□□□ -2.13
LSM5-209ENST00000468872 TRBV7-6A0A0J9YX20 115 aa1.74□□□□□ -2.13
LSM5-209ENST00000468872 TMEM189A5PLL7 270 aa1.74□□□□□ -2.13
LSM5-209ENST00000468872 CST7O76096 145 aa1.74□□□□□ -2.13
LSM5-209ENST00000468872 SCTP09683 121 aa1.74□□□□□ -2.13
LSM5-209ENST00000468872 UBA52P62987 128 aaKnown RBP1.74□□□□□ -2.13
LSM5-209ENST00000468872 HBBP68871 147 aa1.74□□□□□ -2.13
LSM5-209ENST00000468872 KIAA2026Q5HYC2 2103 aa1.74□□□□□ -2.13
LSM5-209ENST00000468872 BRMS1LQ5PSV4 323 aa1.74□□□□□ -2.13
LSM5-209ENST00000468872 DPPA3Q6W0C5 159 aa1.74□□□□□ -2.13
LSM5-209ENST00000468872 Q96M85 177 aa1.74□□□□□ -2.13
LSM5-209ENST00000468872 CST9LQ9H4G1 147 aa1.74□□□□□ -2.13
LSM5-209ENST00000468872 BCL2L10Q9HD36 194 aa1.74□□□□□ -2.13
LSM5-209ENST00000468872 LHFPL6Q9Y693 200 aa1.74□□□□□ -2.13
LSM5-209ENST00000468872 MYOFQ9NZM1 2061 aa1.73□□□□□ -2.13
LSM5-209ENST00000468872 TRAV3A0A0B4J244 114 aa1.73□□□□□ -2.13
LSM5-209ENST00000468872 C9JAW5 83 aa1.73□□□□□ -2.13
LSM5-209ENST00000468872 SDCBPO00560 298 aaPredicted RBP1.73□□□□□ -2.13
LSM5-209ENST00000468872 LYZL6O75951 148 aa1.73□□□□□ -2.13
LSM5-209ENST00000468872 IGLV1-51P01701 117 aa1.73□□□□□ -2.13
LSM5-209ENST00000468872 HMGA1P17096 107 aaKnown RBP1.73□□□□□ -2.13
LSM5-209ENST00000468872 SRP9P49458 86 aaKnown RBP1.73□□□□□ -2.13
LSM5-209ENST00000468872 VMA21Q3ZAQ7 101 aa1.73□□□□□ -2.13
LSM5-209ENST00000468872 OR8B3Q8NGG8 313 aa1.73□□□□□ -2.13
LSM5-209ENST00000468872 LZICQ8WZA0 190 aa1.73□□□□□ -2.13
LSM5-209ENST00000468872 CBLN4Q9NTU7 201 aa1.73□□□□□ -2.13
LSM5-209ENST00000468872 HSPB8Q9UJY1 196 aa1.73□□□□□ -2.13
LSM5-209ENST00000468872 HIGD1AQ9Y241 93 aa1.73□□□□□ -2.13
LSM5-209ENST00000468872 MYH10P35580 1976 aa1.72□□□□□ -2.13
LSM5-209ENST00000468872 ALPK2Q86TB3 2170 aa1.72□□□□□ -2.13
LSM5-209ENST00000468872 HIST1H2BKO60814 126 aa1.72□□□□□ -2.13
LSM5-209ENST00000468872 TIMM17BO60830 172 aa1.72□□□□□ -2.13
LSM5-209ENST00000468872 PMP2P02689 132 aa1.72□□□□□ -2.13
LSM5-209ENST00000468872 HIST1H2BJP06899 126 aa1.72□□□□□ -2.13
LSM5-209ENST00000468872 METTL15P1P0C7V9 234 aa1.72□□□□□ -2.13
LSM5-209ENST00000468872 FABP2P12104 132 aa1.72□□□□□ -2.13
LSM5-209ENST00000468872 SDC2P34741 201 aa1.72□□□□□ -2.13
LSM5-209ENST00000468872 RPL35P42766 123 aaKnown RBP1.72□□□□□ -2.13
LSM5-209ENST00000468872 Q1T7F1 81 aa1.72□□□□□ -2.13
LSM5-209ENST00000468872 ESRGQ1W209 222 aa1.72□□□□□ -2.13
LSM5-209ENST00000468872 OR8I2Q8N0Y5 310 aa1.72□□□□□ -2.13
LSM5-209ENST00000468872 CACYBPQ9HB71 228 aaKnown RBP1.72□□□□□ -2.13
LSM5-209ENST00000468872 NIT2Q9NQR4 276 aa1.72□□□□□ -2.13
LSM5-209ENST00000468872 SPANXCQ9NY87 97 aa1.72□□□□□ -2.13
LSM5-209ENST00000468872 TNXBP22105 4242 aa1.72□□□□□ -2.13
LSM5-209ENST00000468872 MYO5AQ9Y4I1 1855 aaKnown RBP1.71□□□□□ -2.14
LSM5-209ENST00000468872 MYH9P35579 1960 aaKnown RBP1.71□□□□□ -2.14
LSM5-209ENST00000468872 MEIKINA0A087WXM9 373 aa1.71□□□□□ -2.14
LSM5-209ENST00000468872 TRAV1-1A0A0B4J248 108 aa1.71□□□□□ -2.14
LSM5-209ENST00000468872 OR1I1O60431 355 aa1.71□□□□□ -2.14
LSM5-209ENST00000468872 OR2H2O95918 312 aa1.71□□□□□ -2.14
LSM5-209ENST00000468872 CRPP02741 224 aa1.71□□□□□ -2.14
LSM5-209ENST00000468872 MIFP14174 115 aa1.71□□□□□ -2.14
LSM5-209ENST00000468872 ROMO1P60602 79 aa1.71□□□□□ -2.14
LSM5-209ENST00000468872 ZNF846Q147U1 533 aa1.71□□□□□ -2.14
LSM5-209ENST00000468872 NDUFA5Q16718 116 aa1.71□□□□□ -2.14
LSM5-209ENST00000468872 EIF5AL1Q6IS14 154 aaKnown RBP1.71□□□□□ -2.14
LSM5-209ENST00000468872 FP248Q71RG6 208 aaPredicted RBP1.71□□□□□ -2.14
LSM5-209ENST00000468872 LINC00305Q7Z4B0 112 aa1.71□□□□□ -2.14
LSM5-209ENST00000468872 CROCCP2Q86T23 111 aa1.71□□□□□ -2.14
LSM5-209ENST00000468872 TEX29Q8N6K0 151 aa1.71□□□□□ -2.14
LSM5-209ENST00000468872 TAS2R4Q9NYW5 299 aa1.71□□□□□ -2.14
LSM5-209ENST00000468872 MYH4Q9Y623 1939 aa1.7□□□□□ -2.14
LSM5-209ENST00000468872 TRBV6-5A0A0K0K1A5 114 aa1.7□□□□□ -2.14
LSM5-209ENST00000468872 A8MWV9 139 aa1.7□□□□□ -2.14
LSM5-209ENST00000468872 CITO14578 2027 aa1.7□□□□□ -2.14
LSM5-209ENST00000468872 RER1O15258 196 aa1.7□□□□□ -2.14
LSM5-209ENST00000468872 MT-ND4LP03901 98 aa1.7□□□□□ -2.14
LSM5-209ENST00000468872 DBIP07108 87 aaKnown RBP1.7□□□□□ -2.14
LSM5-209ENST00000468872 MPC1LP0DKB6 136 aa1.7□□□□□ -2.14
LSM5-209ENST00000468872 RPL22P35268 128 aaKnown RBP1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms