RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 OVOL2Q9BRP0 275 aa2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 LINC00467Q9BRT7 94 aa2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 SPXQ9BT56 116 aa2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 JPT2Q9H910 190 aa2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 DNAH9Q9NYC9 4486 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 TRGV2A0A075B6R0 118 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 IGLV5-45A0A087WSX0 123 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 A0A0J9YWU9 116 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 FAM231BA6NCW3 169 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 SMIM9A6NGZ8 99 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 IFITM10A6NMD0 228 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 M0R2P5 195 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 SNAI2O43623 268 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 OR5AL1P0C617 328 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 MIFP14174 115 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 HTN3P15516 51 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 EVI2AP22794 236 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 HBBP68871 147 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 KIAA1644Q3SXP7 199 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 DNLZQ5SXM8 178 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 FAM74A4Q5TZK3 123 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 ZNF493Q6ZR52 646 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 Q6ZTI0 123 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 ZFP82Q8N141 532 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 C11orf72Q8NBR9 251 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 OR4C5Q8NGB2 326 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 RNASE8Q8TDE3 154 aaKnown RBP2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 C9orf85Q96MD7 179 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 SAMD10Q9BYL1 202 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 SCRT2Q9NQ03 307 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 TRAPPC1Q9Y5R8 145 aa2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 HUWE1Q7Z6Z7 4374 aaKnown RBP2.9□□□□□ -1.95
TMEM39A-204ENST00000468545 TRBV24-1A0A075B6N3 115 aa2.89□□□□□ -1.95
TMEM39A-204ENST00000468545 TRAV9-1A0A075B6T8 112 aa2.89□□□□□ -1.95
TMEM39A-204ENST00000468545 PLAC8L1A1L4L8 177 aa2.89□□□□□ -1.95
TMEM39A-204ENST00000468545 SMKR1H3BMG3 65 aa2.89□□□□□ -1.95
TMEM39A-204ENST00000468545 RS1O15537 224 aa2.89□□□□□ -1.95
TMEM39A-204ENST00000468545 APCSP02743 223 aa2.89□□□□□ -1.95
TMEM39A-204ENST00000468545 TRGC2P03986 189 aa2.89□□□□□ -1.95
TMEM39A-204ENST00000468545 S100A8P05109 93 aa2.89□□□□□ -1.95
TMEM39A-204ENST00000468545 TRGC1P0CF51 173 aa2.89□□□□□ -1.95
TMEM39A-204ENST00000468545 SPART-AS1P0CW21 52 aa2.89□□□□□ -1.95
TMEM39A-204ENST00000468545 RAB5AP20339 215 aa2.89□□□□□ -1.95
TMEM39A-204ENST00000468545 CTRLP40313 264 aa2.89□□□□□ -1.95
TMEM39A-204ENST00000468545 DAD1P61803 113 aa2.89□□□□□ -1.95
TMEM39A-204ENST00000468545 ZNF56Q15929 161 aa2.89□□□□□ -1.95
TMEM39A-204ENST00000468545 FAM222AQ5U5X8 452 aa2.89□□□□□ -1.95
TMEM39A-204ENST00000468545 TMEM136Q6ZRR5 245 aa2.89□□□□□ -1.95
TMEM39A-204ENST00000468545 ATP5L2Q7Z4Y8 100 aa2.89□□□□□ -1.95
TMEM39A-204ENST00000468545 AMN1Q8IY45 258 aa2.89□□□□□ -1.95
TMEM39A-204ENST00000468545 YPEL4Q96NS1 127 aa2.89□□□□□ -1.95
TMEM39A-204ENST00000468545 CELA1Q9UNI1 258 aa2.89□□□□□ -1.95
TMEM39A-204ENST00000468545 TP53TG1Q9Y2A0 90 aa2.89□□□□□ -1.95
TMEM39A-204ENST00000468545 IGHV4-4A0A075B6R2 117 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 TRAV26-2A0A0B4J265 109 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 TRGV4A0A0C4DH28 118 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 LOC389332A0A1B0GUA5 103 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 A0A1B0GW15 77 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 A0A1B0GXF2 115 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 LYRM9A8MSI8 78 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 A8MWV9 139 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 F5H768 121 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 NCR2O95944 276 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 CRYGDP07320 174 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 GATA1P15976 413 aaPredicted RBP2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 RAB4AP20338 218 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 CKS2P33552 79 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 DAZ2Q13117 558 aaKnown RBP2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 COX19Q49B96 90 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 MRPL51Q4U2R6 128 aaKnown RBP2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 CFAP126Q5VTH2 177 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 FAM104BQ5XKR9 115 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 Q8NAQ8 132 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 DEFB104AQ8WTQ1 72 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 RASL10AQ92737 203 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 AP1S3Q96PC3 154 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 B9D2Q9BPU9 175 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 TM2D3Q9BRN9 247 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 GNB1LQ9BYB4 327 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 TMEM191AQ9H0A3 160 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 DPH3P1Q9H4G8 78 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 PKD1L1Q8TDX9 2849 aa2.88□□□□□ -1.95
TMEM39A-204ENST00000468545 TRAV4A0A0B4J268 109 aa2.87□□□□□ -1.95
TMEM39A-204ENST00000468545 A0A0J9YY99 117 aa2.87□□□□□ -1.95
TMEM39A-204ENST00000468545 C1orf196B1AJZ1 125 aa2.87□□□□□ -1.95
TMEM39A-204ENST00000468545 D6R8Y8 96 aa2.87□□□□□ -1.95
TMEM39A-204ENST00000468545 GAS8-AS1O95177 125 aa2.87□□□□□ -1.95
TMEM39A-204ENST00000468545 HLA-DQA1P01909 254 aa2.87□□□□□ -1.95
TMEM39A-204ENST00000468545 P0DMU3 169 aa2.87□□□□□ -1.95
TMEM39A-204ENST00000468545 FAM231AP0DMU4 169 aa2.87□□□□□ -1.95
TMEM39A-204ENST00000468545 FAM231CP0DMU5 169 aa2.87□□□□□ -1.95
TMEM39A-204ENST00000468545 SRIP30626 198 aa2.87□□□□□ -1.95
TMEM39A-204ENST00000468545 SLAQ13239 276 aa2.87□□□□□ -1.95
TMEM39A-204ENST00000468545 IQCJQ1A5X6 159 aa2.87□□□□□ -1.95
TMEM39A-204ENST00000468545 C12orf74Q32Q52 190 aa2.87□□□□□ -1.95
TMEM39A-204ENST00000468545 LGALS9BQ3B8N2 356 aa2.87□□□□□ -1.95
TMEM39A-204ENST00000468545 RASL11AQ6T310 242 aa2.87□□□□□ -1.95
TMEM39A-204ENST00000468545 POM121L12Q8N7R1 296 aa2.87□□□□□ -1.95
TMEM39A-204ENST00000468545 GATD1Q8NB37 220 aa2.87□□□□□ -1.95
TMEM39A-204ENST00000468545 C11orf45Q8TAV5 145 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 179.3 ms