RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 PAPPA-AS1Q5QFB9 102 aa11.75□□□□□ -0.53
TSPAN4-211ENST00000468468 LINC01356Q8N9X3 169 aa11.75□□□□□ -0.53
TSPAN4-211ENST00000468468 ANAPC13Q9BS18 74 aa11.75□□□□□ -0.53
TSPAN4-211ENST00000468468 TGFAP01135 160 aa11.75□□□□□ -0.53
TSPAN4-211ENST00000468468 HERVK_113P61574 105 aa11.75□□□□□ -0.53
TSPAN4-211ENST00000468468 TRAV12-2A0A075B6T6 113 aa11.74□□□□□ -0.53
TSPAN4-211ENST00000468468 TMEM141Q96I45 108 aa11.74□□□□□ -0.53
TSPAN4-211ENST00000468468 ABCA12Q86UK0 2595 aa11.74□□□□□ -0.53
TSPAN4-211ENST00000468468 DEFB112Q30KQ8 113 aa11.74□□□□□ -0.53
TSPAN4-211ENST00000468468 MDFICQ9P1T7 246 aa11.74□□□□□ -0.53
TSPAN4-211ENST00000468468 LGALS9O00182 355 aa11.73□□□□□ -0.53
TSPAN4-211ENST00000468468 IGHV4-59P01825 116 aa11.73□□□□□ -0.53
TSPAN4-211ENST00000468468 PSMB8P28062 276 aa11.73□□□□□ -0.53
TSPAN4-211ENST00000468468 SFTA2Q6UW10 78 aa11.73□□□□□ -0.53
TSPAN4-211ENST00000468468 C10orf99Q6UWK7 81 aa11.73□□□□□ -0.53
TSPAN4-211ENST00000468468 PTH2Q96A98 100 aa11.73□□□□□ -0.53
TSPAN4-211ENST00000468468 IGHV3-16A0A0C4DH30 117 aa11.73□□□□□ -0.53
TSPAN4-211ENST00000468468 SMCPP49901 116 aaPredicted RBP11.73□□□□□ -0.53
TSPAN4-211ENST00000468468 C9orf85Q96MD7 179 aa11.73□□□□□ -0.53
TSPAN4-211ENST00000468468 TIMM17AQ99595 171 aa11.73□□□□□ -0.53
TSPAN4-211ENST00000468468 ZNF256Q9Y2P7 627 aaPredicted RBP11.73□□□□□ -0.53
TSPAN4-211ENST00000468468 TRBV27A0A0K0K1C4 114 aa11.72□□□□□ -0.53
TSPAN4-211ENST00000468468 ZNF56Q15929 161 aa11.72□□□□□ -0.53
TSPAN4-211ENST00000468468 TMEM170BQ5T4T1 132 aa11.72□□□□□ -0.53
TSPAN4-211ENST00000468468 A0A0J9YX75 114 aa11.72□□□□□ -0.53
TSPAN4-211ENST00000468468 TRBV6-5A0A0K0K1A5 114 aa11.72□□□□□ -0.53
TSPAN4-211ENST00000468468 SMIM20Q8N5G0 67 aa11.72□□□□□ -0.53
TSPAN4-211ENST00000468468 C1QTNF4Q9BXJ3 329 aa11.72□□□□□ -0.53
TSPAN4-211ENST00000468468 SNRPD3P62318 126 aaKnown RBP11.71□□□□□ -0.53
TSPAN4-211ENST00000468468 Q8N1Y9 231 aa11.71□□□□□ -0.53
TSPAN4-211ENST00000468468 A0A0J9YY99 117 aa11.71□□□□□ -0.54
TSPAN4-211ENST00000468468 UBE2D1P51668 147 aa11.71□□□□□ -0.54
TSPAN4-211ENST00000468468 GAGE5Q13069 117 aa11.71□□□□□ -0.54
TSPAN4-211ENST00000468468 GAGE6Q13070 117 aa11.71□□□□□ -0.54
TSPAN4-211ENST00000468468 ODF3Q96PU9 254 aa11.71□□□□□ -0.54
TSPAN4-211ENST00000468468 ZNRF2Q8NHG8 242 aa11.7□□□□□ -0.54
TSPAN4-211ENST00000468468 ZNF580Q9UK33 172 aa11.7□□□□□ -0.54
TSPAN4-211ENST00000468468 SPINK13Q1W4C9 94 aa11.7□□□□□ -0.54
TSPAN4-211ENST00000468468 NAV2Q8IVL1 2488 aa11.69□□□□□ -0.54
TSPAN4-211ENST00000468468 M0QY20 66 aa11.69□□□□□ -0.54
TSPAN4-211ENST00000468468 TSPEAR-AS2P59090 65 aa11.69□□□□□ -0.54
TSPAN4-211ENST00000468468 ZNF876PQ49A33 203 aa11.69□□□□□ -0.54
TSPAN4-211ENST00000468468 IGHV1OR15-1A0A075B7D0 117 aa11.69□□□□□ -0.54
TSPAN4-211ENST00000468468 K7EQG2 157 aa11.69□□□□□ -0.54
TSPAN4-211ENST00000468468 LOC107984156A0A0G2JMH3 177 aa11.68□□□□□ -0.54
TSPAN4-211ENST00000468468 ARL17AQ8IVW1 177 aa11.68□□□□□ -0.54
TSPAN4-211ENST00000468468 OPRPNQ99935 248 aaPredicted RBP11.68□□□□□ -0.54
TSPAN4-211ENST00000468468 NHLRC4P0CG21 123 aaPredicted RBP11.67□□□□□ -0.54
TSPAN4-211ENST00000468468 IGHV4-31P0DP07 118 aa11.67□□□□□ -0.54
TSPAN4-211ENST00000468468 DLX4Q92988 240 aaPredicted RBP11.67□□□□□ -0.54
TSPAN4-211ENST00000468468 SYNJ2BPP57105 145 aa11.67□□□□□ -0.54
TSPAN4-211ENST00000468468 DEFB113Q30KQ7 82 aa11.67□□□□□ -0.54
TSPAN4-211ENST00000468468 TRPT1Q86TN4 253 aaKnown RBP11.67□□□□□ -0.54
TSPAN4-211ENST00000468468 PSMB2P49721 201 aa11.67□□□□□ -0.54
TSPAN4-211ENST00000468468 CFAP126Q5VTH2 177 aa11.67□□□□□ -0.54
TSPAN4-211ENST00000468468 CARD19Q96LW7 228 aa11.67□□□□□ -0.54
TSPAN4-211ENST00000468468 NBPF19A0A087WUL8 3843 aa11.66□□□□□ -0.54
TSPAN4-211ENST00000468468 J3QLI3 93 aa11.66□□□□□ -0.54
TSPAN4-211ENST00000468468 RHOHQ15669 191 aa11.66□□□□□ -0.54
TSPAN4-211ENST00000468468 NSUN5P1Q3KNT7 163 aa11.66□□□□□ -0.54
TSPAN4-211ENST00000468468 NDUFA11Q86Y39 141 aa11.66□□□□□ -0.54
TSPAN4-211ENST00000468468 J3QQQ9 107 aa11.66□□□□□ -0.54
TSPAN4-211ENST00000468468 SLC25A29Q8N8R3 303 aa11.66□□□□□ -0.54
TSPAN4-211ENST00000468468 DUX5Q96PT3 197 aa11.66□□□□□ -0.54
TSPAN4-211ENST00000468468 FAM110AQ9BQ89 295 aa11.66□□□□□ -0.54
TSPAN4-211ENST00000468468 IGHV3-30P01768 117 aa11.65□□□□□ -0.54
TSPAN4-211ENST00000468468 P0DMU3 169 aa11.65□□□□□ -0.54
TSPAN4-211ENST00000468468 FAM231AP0DMU4 169 aa11.65□□□□□ -0.54
TSPAN4-211ENST00000468468 FAM231CP0DMU5 169 aa11.65□□□□□ -0.54
TSPAN4-211ENST00000468468 IGHV3-30-5P0DP03 117 aa11.65□□□□□ -0.54
TSPAN4-211ENST00000468468 LGALS3P17931 250 aaKnown RBP11.65□□□□□ -0.54
TSPAN4-211ENST00000468468 CR1P17927 2039 aa11.65□□□□□ -0.54
TSPAN4-211ENST00000468468 TMEM89A2RUT3 159 aa11.65□□□□□ -0.54
TSPAN4-211ENST00000468468 CCDC179H3BU77 68 aa11.65□□□□□ -0.54
TSPAN4-211ENST00000468468 TRBV20-1A0A075B6N2 111 aa11.64□□□□□ -0.55
TSPAN4-211ENST00000468468 AMELXQ99217 191 aa11.64□□□□□ -0.55
TSPAN4-211ENST00000468468 ZNF469Q96JG9 3925 aaPredicted RBP11.64□□□□□ -0.55
TSPAN4-211ENST00000468468 MXRA5Q9NR99 2828 aa11.64□□□□□ -0.55
TSPAN4-211ENST00000468468 Q96MF0 132 aa11.64□□□□□ -0.55
TSPAN4-211ENST00000468468 CFC1BP0CG36 223 aa11.63□□□□□ -0.55
TSPAN4-211ENST00000468468 CFC1P0CG37 223 aa11.63□□□□□ -0.55
TSPAN4-211ENST00000468468 UBE2D3P61077 147 aa11.63□□□□□ -0.55
TSPAN4-211ENST00000468468 UBE2D2P62837 147 aa11.63□□□□□ -0.55
TSPAN4-211ENST00000468468 APCP25054 2843 aa11.63□□□□□ -0.55
TSPAN4-211ENST00000468468 SORL1Q92673 2214 aa11.63□□□□□ -0.55
TSPAN4-211ENST00000468468 I3L3M4 83 aa11.63□□□□□ -0.55
TSPAN4-211ENST00000468468 HIST2H2BCQ6DN03 193 aa11.63□□□□□ -0.55
TSPAN4-211ENST00000468468 C20orf203Q8NBC4 194 aa11.63□□□□□ -0.55
TSPAN4-211ENST00000468468 ZFAND6Q6FIF0 208 aa11.62□□□□□ -0.55
TSPAN4-211ENST00000468468 BEX4Q9NWD9 120 aaPredicted RBP11.62□□□□□ -0.55
TSPAN4-211ENST00000468468 TEX15Q9BXT5 2789 aa11.62□□□□□ -0.55
TSPAN4-211ENST00000468468 TMEM223A0PJW6 202 aa11.62□□□□□ -0.55
TSPAN4-211ENST00000468468 FSHBP01225 129 aa11.62□□□□□ -0.55
TSPAN4-211ENST00000468468 DOPEY2Q9Y3R5 2298 aa11.62□□□□□ -0.55
TSPAN4-211ENST00000468468 TRGV11A0A075B6L2 103 aa11.62□□□□□ -0.55
TSPAN4-211ENST00000468468 TEX29Q8N6K0 151 aa11.62□□□□□ -0.55
TSPAN4-211ENST00000468468 CREBBPQ92793 2442 aa11.61□□□□□ -0.55
TSPAN4-211ENST00000468468 IGHV3-64A0A075B6Q5 118 aa11.61□□□□□ -0.55
TSPAN4-211ENST00000468468 LEPROTO15243 131 aa11.61□□□□□ -0.55
TSPAN4-211ENST00000468468 HTN1P15515 57 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms