RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 GAGE13Q4V321 117 aa10.57□□□□□ -0.72
SNIP1-202ENST00000468040 NEGR1Q7Z3B1 354 aa10.57□□□□□ -0.72
SNIP1-202ENST00000468040 DNAJC30Q96LL9 226 aa10.57□□□□□ -0.72
SNIP1-202ENST00000468040 LINC00694P0DN24 101 aa10.56□□□□□ -0.72
SNIP1-202ENST00000468040 CBLN2Q8IUK8 224 aa10.56□□□□□ -0.72
SNIP1-202ENST00000468040 NEXN-AS1Q8NBZ9 246 aa10.56□□□□□ -0.72
SNIP1-202ENST00000468040 ZNRF2Q8NHG8 242 aa10.56□□□□□ -0.72
SNIP1-202ENST00000468040 NIT2Q9NQR4 276 aa10.56□□□□□ -0.72
SNIP1-202ENST00000468040 Q9UF83 564 aa10.56□□□□□ -0.72
SNIP1-202ENST00000468040 TNFRSF18Q9Y5U5 241 aa10.56□□□□□ -0.72
SNIP1-202ENST00000468040 TGIF2-C20orf24A0A0A6YYL0 155 aa10.55□□□□□ -0.72
SNIP1-202ENST00000468040 PPP1R17O96001 155 aa10.55□□□□□ -0.72
SNIP1-202ENST00000468040 HLA-DQA1P01909 254 aa10.55□□□□□ -0.72
SNIP1-202ENST00000468040 MRPL51Q4U2R6 128 aaKnown RBP10.55□□□□□ -0.72
SNIP1-202ENST00000468040 TMEM136Q6ZRR5 245 aa10.55□□□□□ -0.72
SNIP1-202ENST00000468040 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.55□□□□□ -0.72
SNIP1-202ENST00000468040 GNB1LQ9BYB4 327 aa10.55□□□□□ -0.72
SNIP1-202ENST00000468040 PPBPP02775 128 aa10.54□□□□□ -0.72
SNIP1-202ENST00000468040 MT-ND6P03923 174 aa10.54□□□□□ -0.72
SNIP1-202ENST00000468040 CKS2P33552 79 aa10.54□□□□□ -0.72
SNIP1-202ENST00000468040 CCL18P55774 89 aa10.54□□□□□ -0.72
SNIP1-202ENST00000468040 UBE2D3P61077 147 aa10.54□□□□□ -0.72
SNIP1-202ENST00000468040 UBE2D2P62837 147 aa10.54□□□□□ -0.72
SNIP1-202ENST00000468040 ATP6V0E2Q8NHE4 81 aa10.54□□□□□ -0.72
SNIP1-202ENST00000468040 YPEL4Q96NS1 127 aa10.54□□□□□ -0.72
SNIP1-202ENST00000468040 DNAH7Q8WXX0 4024 aa10.53□□□□□ -0.72
SNIP1-202ENST00000468040 OR10J3Q5JRS4 329 aa10.53□□□□□ -0.72
SNIP1-202ENST00000468040 DAZ4Q86SG3 579 aaKnown RBP10.53□□□□□ -0.72
SNIP1-202ENST00000468040 DAZ3Q9NR90 486 aaKnown RBP10.53□□□□□ -0.72
SNIP1-202ENST00000468040 TRBV6-5A0A0K0K1A5 114 aa10.52□□□□□ -0.73
SNIP1-202ENST00000468040 D6R8Y8 96 aa10.52□□□□□ -0.73
SNIP1-202ENST00000468040 NCR2O95944 276 aa10.52□□□□□ -0.73
SNIP1-202ENST00000468040 TIRAPP58753 221 aa10.52□□□□□ -0.73
SNIP1-202ENST00000468040 ORMDL3Q8N138 153 aa10.52□□□□□ -0.73
SNIP1-202ENST00000468040 RPL39LQ96EH5 51 aaKnown RBP10.52□□□□□ -0.73
SNIP1-202ENST00000468040 SMKR1H3BMG3 65 aa10.51□□□□□ -0.73
SNIP1-202ENST00000468040 APCSP02743 223 aa10.51□□□□□ -0.73
SNIP1-202ENST00000468040 RPS10P46783 165 aaKnown RBP10.51□□□□□ -0.73
SNIP1-202ENST00000468040 ESRGQ1W209 222 aa10.51□□□□□ -0.73
SNIP1-202ENST00000468040 LGALS9CQ6DKI2 356 aa10.51□□□□□ -0.73
SNIP1-202ENST00000468040 LYPD5Q6UWN5 251 aa10.51□□□□□ -0.73
SNIP1-202ENST00000468040 UBE2DNLQ8IWF7 75 aa10.51□□□□□ -0.73
SNIP1-202ENST00000468040 GTSF1LQ9H1H1 148 aa10.51□□□□□ -0.73
SNIP1-202ENST00000468040 ST20Q9HBF5 79 aa10.51□□□□□ -0.73
SNIP1-202ENST00000468040 PHOX2AO14813 284 aa10.5□□□□□ -0.73
SNIP1-202ENST00000468040 GAS8-AS1O95177 125 aa10.5□□□□□ -0.73
SNIP1-202ENST00000468040 NRACQ8N912 160 aa10.5□□□□□ -0.73
SNIP1-202ENST00000468040 LAMTOR2Q9Y2Q5 125 aa10.5□□□□□ -0.73
SNIP1-202ENST00000468040 CSMD3Q7Z407 3707 aa10.49□□□□□ -0.73
SNIP1-202ENST00000468040 TMEM97Q5BJF2 176 aa10.49□□□□□ -0.73
SNIP1-202ENST00000468040 PRELID3AQ96N28 172 aa10.49□□□□□ -0.73
SNIP1-202ENST00000468040 C20orf78Q9BR46 151 aa10.49□□□□□ -0.73
SNIP1-202ENST00000468040 MRPL18Q9H0U6 180 aaKnown RBP10.49□□□□□ -0.73
SNIP1-202ENST00000468040 MRPS16Q9Y3D3 137 aaKnown RBP10.49□□□□□ -0.73
SNIP1-202ENST00000468040 LINC00588Q9Y4M8 146 aa10.49□□□□□ -0.73
SNIP1-202ENST00000468040 STARD9Q9P2P6 4700 aa10.48□□□□□ -0.73
SNIP1-202ENST00000468040 SDHAF1A6NFY7 115 aa10.48□□□□□ -0.73
SNIP1-202ENST00000468040 SCO1O75880 301 aa10.48□□□□□ -0.73
SNIP1-202ENST00000468040 TNFRSF6BO95407 300 aa10.48□□□□□ -0.73
SNIP1-202ENST00000468040 SUMO2P61956 95 aaKnown RBP10.48□□□□□ -0.73
SNIP1-202ENST00000468040 LINC00476Q8WZB0 136 aa10.48□□□□□ -0.73
SNIP1-202ENST00000468040 TRAPPC1Q9Y5R8 145 aa10.48□□□□□ -0.73
SNIP1-202ENST00000468040 IGHV3-38A0A0C4DH36 116 aa10.47□□□□□ -0.73
SNIP1-202ENST00000468040 FABP9Q0Z7S8 132 aa10.47□□□□□ -0.73
SNIP1-202ENST00000468040 LELP1Q5T871 98 aa10.47□□□□□ -0.73
SNIP1-202ENST00000468040 UPK3BQ9BT76 320 aa10.47□□□□□ -0.73
SNIP1-202ENST00000468040 TMEM70Q9BUB7 260 aa10.47□□□□□ -0.73
SNIP1-202ENST00000468040 TRAV8-6A0A0B4J262 113 aa10.46□□□□□ -0.73
SNIP1-202ENST00000468040 TRBV27A0A0K0K1C4 114 aa10.46□□□□□ -0.73
SNIP1-202ENST00000468040 I3L3M4 83 aa10.46□□□□□ -0.73
SNIP1-202ENST00000468040 VCYO14598 125 aa10.46□□□□□ -0.73
SNIP1-202ENST00000468040 LY6G6CO95867 125 aa10.46□□□□□ -0.73
SNIP1-202ENST00000468040 NPYP01303 97 aa10.46□□□□□ -0.73
SNIP1-202ENST00000468040 COTL1Q14019 142 aa10.46□□□□□ -0.73
SNIP1-202ENST00000468040 DYNC2H1Q8NCM8 4307 aaKnown RBP10.46□□□□□ -0.74
SNIP1-202ENST00000468040 TRBV6-8A0A0A6YYG3 113 aa10.45□□□□□ -0.74
SNIP1-202ENST00000468040 COLCA2A8K830 154 aa10.45□□□□□ -0.74
SNIP1-202ENST00000468040 PMCHP20382 165 aa10.45□□□□□ -0.74
SNIP1-202ENST00000468040 POLR2KP53803 58 aaKnown RBP10.45□□□□□ -0.74
SNIP1-202ENST00000468040 RPL32P62910 135 aaKnown RBP10.45□□□□□ -0.74
SNIP1-202ENST00000468040 KIAA1644Q3SXP7 199 aa10.45□□□□□ -0.74
SNIP1-202ENST00000468040 MAP1LC3AQ9H492 121 aa10.45□□□□□ -0.74
SNIP1-202ENST00000468040 TENM2Q9NT68 2774 aa10.44□□□□□ -0.74
SNIP1-202ENST00000468040 TRBV25-1A0A075B6N4 114 aa10.44□□□□□ -0.74
SNIP1-202ENST00000468040 IGHV1-24A0A0C4DH33 117 aa10.43□□□□□ -0.74
SNIP1-202ENST00000468040 LCE6AA0A183 80 aa10.43□□□□□ -0.74
SNIP1-202ENST00000468040 RAB5AP20339 215 aa10.43□□□□□ -0.74
SNIP1-202ENST00000468040 IQCJQ1A5X6 159 aa10.43□□□□□ -0.74
SNIP1-202ENST00000468040 NTM-AS1Q6ZSK4 140 aa10.43□□□□□ -0.74
SNIP1-202ENST00000468040 KIR2DL4Q99706 377 aa10.43□□□□□ -0.74
SNIP1-202ENST00000468040 ALKBH7Q9BT30 221 aaPredicted RBP10.43□□□□□ -0.74
SNIP1-202ENST00000468040 SMIM2Q9BVW6 85 aa10.43□□□□□ -0.74
SNIP1-202ENST00000468040 PRSS47A8MTI9 375 aa10.42□□□□□ -0.74
SNIP1-202ENST00000468040 TCAPO15273 167 aa10.42□□□□□ -0.74
SNIP1-202ENST00000468040 SIVA1O15304 175 aa10.41□□□□□ -0.74
SNIP1-202ENST00000468040 FCER1GP30273 86 aa10.41□□□□□ -0.74
SNIP1-202ENST00000468040 AMTP48728 403 aa10.41□□□□□ -0.74
SNIP1-202ENST00000468040 WFDC10BQ8IUB3 73 aa10.41□□□□□ -0.74
SNIP1-202ENST00000468040 TMEM243Q9BU79 118 aa10.41□□□□□ -0.74
SNIP1-202ENST00000468040 Q9H8V8 135 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms