RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 FAM208BQ5VWN6 2430 aa5.04□□□□□ -1.6
CDHR3-204ENST00000466351 TRBV20-1A0A075B6N2 111 aa5.04□□□□□ -1.6
CDHR3-204ENST00000466351 A0A0J9YY99 117 aa5.04□□□□□ -1.6
CDHR3-204ENST00000466351 G3V4G9 280 aa5.04□□□□□ -1.6
CDHR3-204ENST00000466351 HOXA3O43365 443 aaPredicted RBP5.04□□□□□ -1.6
CDHR3-204ENST00000466351 INSP01308 110 aa5.04□□□□□ -1.6
CDHR3-204ENST00000466351 MRPS36P82909 103 aaKnown RBP5.04□□□□□ -1.6
CDHR3-204ENST00000466351 FHL3Q13643 280 aa5.04□□□□□ -1.6
CDHR3-204ENST00000466351 SPINK13Q1W4C9 94 aa5.04□□□□□ -1.6
CDHR3-204ENST00000466351 MORN3Q6PF18 240 aaPredicted RBP5.04□□□□□ -1.6
CDHR3-204ENST00000466351 SCGB1D4Q6XE38 83 aa5.04□□□□□ -1.6
CDHR3-204ENST00000466351 MAPKAPK5-AS1Q8N8E1 139 aa5.04□□□□□ -1.6
CDHR3-204ENST00000466351 SLC25A29Q8N8R3 303 aa5.04□□□□□ -1.6
CDHR3-204ENST00000466351 RAX2Q96IS3 184 aa5.04□□□□□ -1.6
CDHR3-204ENST00000466351 AMELXQ99217 191 aa5.04□□□□□ -1.6
CDHR3-204ENST00000466351 MYO9AB2RTY4 2548 aa5.04□□□□□ -1.6
CDHR3-204ENST00000466351 NAV2Q8IVL1 2488 aa5.04□□□□□ -1.6
CDHR3-204ENST00000466351 CELSR2Q9HCU4 2923 aa5.03□□□□□ -1.6
CDHR3-204ENST00000466351 IGKV3-7A0A075B6H7 116 aa5.03□□□□□ -1.6
CDHR3-204ENST00000466351 A0A087WWL8 130 aa5.03□□□□□ -1.6
CDHR3-204ENST00000466351 TRBV10-1A0A0K0K1A3 114 aa5.03□□□□□ -1.6
CDHR3-204ENST00000466351 TMEM223A0PJW6 202 aa5.03□□□□□ -1.6
CDHR3-204ENST00000466351 TMEM238C9JI98 176 aa5.03□□□□□ -1.6
CDHR3-204ENST00000466351 J3QQQ9 107 aa5.03□□□□□ -1.6
CDHR3-204ENST00000466351 IGHV3-53P01767 116 aa5.03□□□□□ -1.6
CDHR3-204ENST00000466351 DEFB1P60022 68 aa5.03□□□□□ -1.6
CDHR3-204ENST00000466351 DUX5Q96PT3 197 aa5.03□□□□□ -1.6
CDHR3-204ENST00000466351 TTTY13Q9BZ97 58 aa5.03□□□□□ -1.6
CDHR3-204ENST00000466351 VCX2Q9H322 139 aa5.03□□□□□ -1.6
CDHR3-204ENST00000466351 UTP20O75691 2785 aaKnown RBP5.02□□□□□ -1.61
CDHR3-204ENST00000466351 IGLV4-3A0A075B6K6 122 aa5.02□□□□□ -1.61
CDHR3-204ENST00000466351 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.02□□□□□ -1.61
CDHR3-204ENST00000466351 A0A0B4J2C4 111 aa5.02□□□□□ -1.61
CDHR3-204ENST00000466351 A0A0J9YXY3 114 aa5.02□□□□□ -1.61
CDHR3-204ENST00000466351 TIMM17BO60830 172 aa5.02□□□□□ -1.61
CDHR3-204ENST00000466351 LGALS3P17931 250 aaKnown RBP5.02□□□□□ -1.61
CDHR3-204ENST00000466351 SRD5A1P18405 259 aa5.02□□□□□ -1.61
CDHR3-204ENST00000466351 PCP4P48539 62 aa5.02□□□□□ -1.61
CDHR3-204ENST00000466351 UBE2D3P61077 147 aa5.02□□□□□ -1.61
CDHR3-204ENST00000466351 UBE2D2P62837 147 aa5.02□□□□□ -1.61
CDHR3-204ENST00000466351 RPL24P83731 157 aaKnown RBP5.02□□□□□ -1.61
CDHR3-204ENST00000466351 SRSF9Q13242 221 aaKnown RBP eCLIP5.02□□□□□ -1.61
CDHR3-204ENST00000466351 FAM74A4Q5TZK3 123 aa5.02□□□□□ -1.61
CDHR3-204ENST00000466351 FAM19A3Q7Z5A8 133 aa5.02□□□□□ -1.61
CDHR3-204ENST00000466351 TMEM61Q8N0U2 210 aa5.02□□□□□ -1.61
CDHR3-204ENST00000466351 ZNF843Q8N446 348 aa5.02□□□□□ -1.61
CDHR3-204ENST00000466351 C11orf72Q8NBR9 251 aa5.02□□□□□ -1.61
CDHR3-204ENST00000466351 IL17DQ8TAD2 202 aa5.02□□□□□ -1.61
CDHR3-204ENST00000466351 DYNLRB2Q8TF09 96 aa5.02□□□□□ -1.61
CDHR3-204ENST00000466351 RAB37Q96AX2 223 aa5.02□□□□□ -1.61
CDHR3-204ENST00000466351 LINC01600Q96MT4 127 aa5.02□□□□□ -1.61
CDHR3-204ENST00000466351 VPS25Q9BRG1 176 aa5.02□□□□□ -1.61
CDHR3-204ENST00000466351 JPT2Q9H910 190 aa5.02□□□□□ -1.61
CDHR3-204ENST00000466351 MAP6D1Q9H9H5 199 aa5.02□□□□□ -1.61
CDHR3-204ENST00000466351 CSDC2Q9Y534 153 aaKnown RBP5.02□□□□□ -1.61
CDHR3-204ENST00000466351 ZNF462Q96JM2 2506 aa5.02□□□□□ -1.61
CDHR3-204ENST00000466351 SORL1Q92673 2214 aa5.01□□□□□ -1.61
CDHR3-204ENST00000466351 CELSR1Q9NYQ6 3014 aa5.01□□□□□ -1.61
CDHR3-204ENST00000466351 TRAV12-2A0A075B6T6 113 aa5.01□□□□□ -1.61
CDHR3-204ENST00000466351 IGLV5-45A0A087WSX0 123 aa5.01□□□□□ -1.61
CDHR3-204ENST00000466351 TINCRA0A1B0GVN0 87 aa5.01□□□□□ -1.61
CDHR3-204ENST00000466351 H3BMG7 143 aa5.01□□□□□ -1.61
CDHR3-204ENST00000466351 RS1O15537 224 aa5.01□□□□□ -1.61
CDHR3-204ENST00000466351 IGHV3-30P01768 117 aa5.01□□□□□ -1.61
CDHR3-204ENST00000466351 P0DMU3 169 aa5.01□□□□□ -1.61
CDHR3-204ENST00000466351 FAM231AP0DMU4 169 aa5.01□□□□□ -1.61
CDHR3-204ENST00000466351 FAM231CP0DMU5 169 aa5.01□□□□□ -1.61
CDHR3-204ENST00000466351 IGHV3-30-5P0DP03 117 aa5.01□□□□□ -1.61
CDHR3-204ENST00000466351 SCGB1A1P11684 91 aa5.01□□□□□ -1.61
CDHR3-204ENST00000466351 ZNF22P17026 224 aaPredicted RBP5.01□□□□□ -1.61
CDHR3-204ENST00000466351 EDN2P20800 178 aa5.01□□□□□ -1.61
CDHR3-204ENST00000466351 DEFB131AP59861 70 aa5.01□□□□□ -1.61
CDHR3-204ENST00000466351 RPL39P62891 51 aaKnown RBP5.01□□□□□ -1.61
CDHR3-204ENST00000466351 DEFB114Q30KQ6 69 aa5.01□□□□□ -1.61
CDHR3-204ENST00000466351 TMEM170BQ5T4T1 132 aa5.01□□□□□ -1.61
CDHR3-204ENST00000466351 C10orf99Q6UWK7 81 aa5.01□□□□□ -1.61
CDHR3-204ENST00000466351 KRTAP1-3Q8IUG1 177 aa5.01□□□□□ -1.61
CDHR3-204ENST00000466351 C10orf126Q8N4M7 172 aa5.01□□□□□ -1.61
CDHR3-204ENST00000466351 ZNRF2Q8NHG8 242 aa5.01□□□□□ -1.61
CDHR3-204ENST00000466351 C16orf95Q9H693 158 aa5.01□□□□□ -1.61
CDHR3-204ENST00000466351 TNFRSF18Q9Y5U5 241 aa5.01□□□□□ -1.61
CDHR3-204ENST00000466351 MXRA5Q9NR99 2828 aa5.01□□□□□ -1.61
CDHR3-204ENST00000466351 K7ERJ3 54 aa5□□□□□ -1.61
CDHR3-204ENST00000466351 SLURP1P55000 103 aa5□□□□□ -1.61
CDHR3-204ENST00000466351 COTL1Q14019 142 aa5□□□□□ -1.61
CDHR3-204ENST00000466351 CD300EQ496F6 205 aaPredicted RBP5□□□□□ -1.61
CDHR3-204ENST00000466351 CFAP126Q5VTH2 177 aa5□□□□□ -1.61
CDHR3-204ENST00000466351 NDUFA11Q86Y39 141 aa5□□□□□ -1.61
CDHR3-204ENST00000466351 COPS9Q8WXC6 57 aa5□□□□□ -1.61
CDHR3-204ENST00000466351 DUX3Q96PT4 197 aa5□□□□□ -1.61
CDHR3-204ENST00000466351 SPANXDQ9BXN6 97 aa5□□□□□ -1.61
CDHR3-204ENST00000466351 MRPL16Q9NX20 251 aaKnown RBP5□□□□□ -1.61
CDHR3-204ENST00000466351 SPANXCQ9NY87 97 aa5□□□□□ -1.61
CDHR3-204ENST00000466351 PRO0461Q9UI25 63 aa5□□□□□ -1.61
CDHR3-204ENST00000466351 ZANQ9Y493 2812 aa4.99□□□□□ -1.61
CDHR3-204ENST00000466351 RBMY1BA6NDE4 496 aaKnown RBP4.99□□□□□ -1.61
CDHR3-204ENST00000466351 RBMY1EA6NEQ0 496 aaKnown RBP4.99□□□□□ -1.61
CDHR3-204ENST00000466351 H7C423 109 aa4.99□□□□□ -1.61
CDHR3-204ENST00000466351 RBMY1DP0C7P1 496 aaKnown RBP4.99□□□□□ -1.61
CDHR3-204ENST00000466351 RBMY1A1P0DJD3 496 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms