RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 DUSP14O95147 198 aaKnown RBP13.63□□□□□ -0.23
CAPN3-209ENST00000466222 S100A4P26447 101 aaKnown RBP13.63□□□□□ -0.23
CAPN3-209ENST00000466222 CDKN1BP46527 198 aa13.63□□□□□ -0.23
CAPN3-209ENST00000466222 ERASQ7Z444 233 aa13.63□□□□□ -0.23
CAPN3-209ENST00000466222 KLLNB2CW77 178 aa13.62□□□□□ -0.23
CAPN3-209ENST00000466222 PLNP26678 52 aa13.62□□□□□ -0.23
CAPN3-209ENST00000466222 RBX1P62877 108 aa13.62□□□□□ -0.23
CAPN3-209ENST00000466222 TRAV26-2A0A0B4J265 109 aa13.62□□□□□ -0.23
CAPN3-209ENST00000466222 TRAV12-3A0A0B4J271 114 aa13.62□□□□□ -0.23
CAPN3-209ENST00000466222 GAGE10A6NGK3 116 aa13.62□□□□□ -0.23
CAPN3-209ENST00000466222 STHQ8IWL8 128 aa13.62□□□□□ -0.23
CAPN3-209ENST00000466222 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.61□□□□□ -0.23
CAPN3-209ENST00000466222 ZC2HC1BQ5TFG8 222 aa13.61□□□□□ -0.23
CAPN3-209ENST00000466222 PHLDA3Q9Y5J5 127 aa13.61□□□□□ -0.23
CAPN3-209ENST00000466222 WIPF1O43516 503 aa13.6□□□□□ -0.23
CAPN3-209ENST00000466222 KRTAP10-11P60412 298 aa13.6□□□□□ -0.23
CAPN3-209ENST00000466222 SUMO2P61956 95 aaKnown RBP13.6□□□□□ -0.23
CAPN3-209ENST00000466222 CST9LQ9H4G1 147 aa13.6□□□□□ -0.23
CAPN3-209ENST00000466222 AGRNO00468 2067 aa13.6□□□□□ -0.23
CAPN3-209ENST00000466222 IGKV2D-26A0A0A0MRZ7 120 aa13.6□□□□□ -0.23
CAPN3-209ENST00000466222 A8MTW9 85 aa13.6□□□□□ -0.23
CAPN3-209ENST00000466222 RBMY1A1P0DJD3 496 aaKnown RBP13.6□□□□□ -0.23
CAPN3-209ENST00000466222 RBMY1CP0DJD4 496 aa13.6□□□□□ -0.23
CAPN3-209ENST00000466222 RPL35AP18077 110 aaKnown RBP13.6□□□□□ -0.23
CAPN3-209ENST00000466222 RBMY1FQ15415 496 aaKnown RBP13.6□□□□□ -0.23
CAPN3-209ENST00000466222 ANXA2RQ3ZCQ2 193 aa13.6□□□□□ -0.23
CAPN3-209ENST00000466222 UFSP1Q6NVU6 142 aa13.6□□□□□ -0.23
CAPN3-209ENST00000466222 TRPT1Q86TN4 253 aaKnown RBP13.6□□□□□ -0.23
CAPN3-209ENST00000466222 G3V4G9 280 aa13.59□□□□□ -0.23
CAPN3-209ENST00000466222 NXPH4O95158 308 aa13.59□□□□□ -0.23
CAPN3-209ENST00000466222 TCTAP57738 103 aa13.59□□□□□ -0.23
CAPN3-209ENST00000466222 TAL2Q16559 108 aa13.59□□□□□ -0.23
CAPN3-209ENST00000466222 GTSCR1Q86UQ5 136 aa13.59□□□□□ -0.23
CAPN3-209ENST00000466222 Q8N1Y9 231 aa13.59□□□□□ -0.23
CAPN3-209ENST00000466222 POM121L12Q8N7R1 296 aa13.59□□□□□ -0.23
CAPN3-209ENST00000466222 TOMM6Q96B49 74 aa13.59□□□□□ -0.23
CAPN3-209ENST00000466222 ODF3Q96PU9 254 aa13.59□□□□□ -0.23
CAPN3-209ENST00000466222 CHAC1Q9BUX1 264 aa13.59□□□□□ -0.23
CAPN3-209ENST00000466222 MRPL35Q9NZE8 188 aaKnown RBP13.59□□□□□ -0.23
CAPN3-209ENST00000466222 LINC01549A6NIU2 74 aa13.58□□□□□ -0.23
CAPN3-209ENST00000466222 H7C1H1 209 aa13.58□□□□□ -0.23
CAPN3-209ENST00000466222 K7EP34 96 aa13.58□□□□□ -0.23
CAPN3-209ENST00000466222 PRM2P04554 102 aa13.58□□□□□ -0.23
CAPN3-209ENST00000466222 RASL10AQ92737 203 aa13.58□□□□□ -0.23
CAPN3-209ENST00000466222 FAM110AQ9BQ89 295 aa13.58□□□□□ -0.23
CAPN3-209ENST00000466222 GAGE12BA1L429 117 aa13.58□□□□□ -0.24
CAPN3-209ENST00000466222 F8VRH5 84 aa13.58□□□□□ -0.24
CAPN3-209ENST00000466222 SMIM13P0DJ93 91 aa13.58□□□□□ -0.24
CAPN3-209ENST00000466222 RPL32P62910 135 aaKnown RBP13.57□□□□□ -0.24
CAPN3-209ENST00000466222 OR5A1Q8NGJ0 315 aa13.57□□□□□ -0.24
CAPN3-209ENST00000466222 XCL2Q9UBD3 114 aa13.57□□□□□ -0.24
CAPN3-209ENST00000466222 TRBV25-1A0A075B6N4 114 aa13.56□□□□□ -0.24
CAPN3-209ENST00000466222 H3BUT2 72 aa13.56□□□□□ -0.24
CAPN3-209ENST00000466222 CMC4P56277 68 aaPredicted RBP13.56□□□□□ -0.24
CAPN3-209ENST00000466222 OCIAD2Q56VL3 154 aa13.56□□□□□ -0.24
CAPN3-209ENST00000466222 GNRH2O43555 120 aa13.56□□□□□ -0.24
CAPN3-209ENST00000466222 SPRY2O43597 315 aa13.56□□□□□ -0.24
CAPN3-209ENST00000466222 GIG44P09565 113 aaPredicted RBP13.56□□□□□ -0.24
CAPN3-209ENST00000466222 TM2D2Q9BX73 214 aa13.56□□□□□ -0.24
CAPN3-209ENST00000466222 SCGB3A1Q96QR1 104 aa13.55□□□□□ -0.24
CAPN3-209ENST00000466222 A0A1W2PPM0 123 aa13.54□□□□□ -0.24
CAPN3-209ENST00000466222 RNASE3P12724 160 aaKnown RBP13.54□□□□□ -0.24
CAPN3-209ENST00000466222 GCSHP23434 173 aa13.54□□□□□ -0.24
CAPN3-209ENST00000466222 C14orf178Q8N769 122 aaPredicted RBP13.54□□□□□ -0.24
CAPN3-209ENST00000466222 DNAH3Q8TD57 4116 aa13.54□□□□□ -0.24
CAPN3-209ENST00000466222 K7ERU9 68 aa13.54□□□□□ -0.24
CAPN3-209ENST00000466222 HTN1P15515 57 aa13.54□□□□□ -0.24
CAPN3-209ENST00000466222 CHTOPQ9Y3Y2 248 aaKnown RBP13.54□□□□□ -0.24
CAPN3-209ENST00000466222 MGPP08493 103 aa13.53□□□□□ -0.24
CAPN3-209ENST00000466222 CEND1Q8N111 149 aa13.53□□□□□ -0.24
CAPN3-209ENST00000466222 NEXN-AS1Q8NBZ9 246 aa13.53□□□□□ -0.24
CAPN3-209ENST00000466222 CLUHP3Q96NS8 147 aa13.52□□□□□ -0.24
CAPN3-209ENST00000466222 NOTCH1P46531 2555 aa13.52□□□□□ -0.24
CAPN3-209ENST00000466222 NBEAL1Q6ZS30 2694 aa13.52□□□□□ -0.24
CAPN3-209ENST00000466222 MGAM2Q2M2H8 2515 aa13.52□□□□□ -0.24
CAPN3-209ENST00000466222 FABP2P12104 132 aa13.52□□□□□ -0.25
CAPN3-209ENST00000466222 FAM159AQ6UWV7 190 aa13.52□□□□□ -0.25
CAPN3-209ENST00000466222 NBEAL2Q6ZNJ1 2754 aa13.51□□□□□ -0.25
CAPN3-209ENST00000466222 FXYD2P54710 66 aa13.51□□□□□ -0.25
CAPN3-209ENST00000466222 EGFEM1PQ0D2K5 195 aa13.51□□□□□ -0.25
CAPN3-209ENST00000466222 C2orf66Q6UXQ4 117 aa13.51□□□□□ -0.25
CAPN3-209ENST00000466222 RAB37Q96AX2 223 aa13.51□□□□□ -0.25
CAPN3-209ENST00000466222 RPL39LQ96EH5 51 aaKnown RBP13.51□□□□□ -0.25
CAPN3-209ENST00000466222 IGHV3OR16-12A0A075B7B8 117 aa13.51□□□□□ -0.25
CAPN3-209ENST00000466222 SPCS1Q9Y6A9 102 aa13.51□□□□□ -0.25
CAPN3-209ENST00000466222 KIF25-AS1Q9Y6Z4 181 aa13.51□□□□□ -0.25
CAPN3-209ENST00000466222 PCP4P48539 62 aa13.5□□□□□ -0.25
CAPN3-209ENST00000466222 SAMD5Q5TGI4 173 aa13.5□□□□□ -0.25
CAPN3-209ENST00000466222 C1orf158Q8N1D5 194 aa13.5□□□□□ -0.25
CAPN3-209ENST00000466222 TTTY13Q9BZ97 58 aa13.5□□□□□ -0.25
CAPN3-209ENST00000466222 OR11H2Q8NH07 326 aa13.49□□□□□ -0.25
CAPN3-209ENST00000466222 MDFICQ9P1T7 246 aa13.49□□□□□ -0.25
CAPN3-209ENST00000466222 PRB2P02812 416 aaPredicted RBP13.49□□□□□ -0.25
CAPN3-209ENST00000466222 BAALCQ8WXS3 180 aa13.49□□□□□ -0.25
CAPN3-209ENST00000466222 CSTL1Q9H114 145 aa13.49□□□□□ -0.25
CAPN3-209ENST00000466222 IGHV1OR15-1A0A075B7D0 117 aa13.48□□□□□ -0.25
CAPN3-209ENST00000466222 RIPPLY3P57055 190 aa13.48□□□□□ -0.25
CAPN3-209ENST00000466222 MAPKAPK5-AS1Q8N8E1 139 aa13.48□□□□□ -0.25
CAPN3-209ENST00000466222 PHLDA1Q8WV24 401 aaPredicted RBP13.48□□□□□ -0.25
CAPN3-209ENST00000466222 INSP01308 110 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms