RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 LTAP01374 205 aa6.28□□□□□ -1.4
USP39-212ENST00000465514 RAB4BP61018 213 aa6.28□□□□□ -1.4
USP39-212ENST00000465514 CST9LP1Q5W188 147 aa6.28□□□□□ -1.4
USP39-212ENST00000465514 C15orf54Q8N8G6 183 aa6.28□□□□□ -1.4
USP39-212ENST00000465514 OR10G8Q8NGN5 311 aa6.28□□□□□ -1.4
USP39-212ENST00000465514 KRTAP4-12Q9BQ66 201 aa6.28□□□□□ -1.4
USP39-212ENST00000465514 C1orf43Q9BWL3 253 aa6.28□□□□□ -1.4
USP39-212ENST00000465514 MAP1LC3BQ9GZQ8 125 aa6.28□□□□□ -1.4
USP39-212ENST00000465514 PTTG1O95997 202 aa6.27□□□□□ -1.41
USP39-212ENST00000465514 CRPP02741 224 aa6.27□□□□□ -1.41
USP39-212ENST00000465514 AKR1C3P42330 323 aa6.27□□□□□ -1.41
USP39-212ENST00000465514 FHITP49789 147 aa6.27□□□□□ -1.41
USP39-212ENST00000465514 RGS21Q2M5E4 152 aa6.27□□□□□ -1.41
USP39-212ENST00000465514 MPV17L2Q567V2 206 aa6.27□□□□□ -1.41
USP39-212ENST00000465514 NEXN-AS1Q8NBZ9 246 aa6.27□□□□□ -1.41
USP39-212ENST00000465514 USP17L23D6RBM5 183 aa6.26□□□□□ -1.41
USP39-212ENST00000465514 ANGP03950 147 aaKnown RBP6.26□□□□□ -1.41
USP39-212ENST00000465514 RPL19P84098 196 aaKnown RBP6.26□□□□□ -1.41
USP39-212ENST00000465514 ZNF56Q15929 161 aa6.26□□□□□ -1.41
USP39-212ENST00000465514 PRR27Q6MZM9 219 aa6.26□□□□□ -1.41
USP39-212ENST00000465514 OR10AG1Q8NH19 301 aa6.26□□□□□ -1.41
USP39-212ENST00000465514 STOML3Q8TAV4 291 aa6.26□□□□□ -1.41
USP39-212ENST00000465514 TCEAL7Q9BRU2 100 aa6.26□□□□□ -1.41
USP39-212ENST00000465514 CHCHD5Q9BSY4 110 aa6.26□□□□□ -1.41
USP39-212ENST00000465514 MUC21A0A0G2JKD1 596 aa6.25□□□□□ -1.41
USP39-212ENST00000465514 MUC21A0A140T8X8 626 aa6.25□□□□□ -1.41
USP39-212ENST00000465514 PAGE4O60829 102 aa6.25□□□□□ -1.41
USP39-212ENST00000465514 HLA-DQA1P01909 254 aa6.25□□□□□ -1.41
USP39-212ENST00000465514 PRSS1P07477 247 aa6.25□□□□□ -1.41
USP39-212ENST00000465514 LCE3BQ5TA77 95 aa6.25□□□□□ -1.41
USP39-212ENST00000465514 ZNF471Q9BX82 626 aaPredicted RBP6.25□□□□□ -1.41
USP39-212ENST00000465514 CYTL1Q9NRR1 136 aa6.25□□□□□ -1.41
USP39-212ENST00000465514 F5H697 171 aa6.24□□□□□ -1.41
USP39-212ENST00000465514 G3V3Q6 166 aa6.24□□□□□ -1.41
USP39-212ENST00000465514 S100A9P06702 114 aaKnown RBP6.24□□□□□ -1.41
USP39-212ENST00000465514 SSTP61278 116 aa6.24□□□□□ -1.41
USP39-212ENST00000465514 PKIAP61925 76 aa6.24□□□□□ -1.41
USP39-212ENST00000465514 MIAQ16674 131 aa6.24□□□□□ -1.41
USP39-212ENST00000465514 DGAT2L7PQ6IED9 249 aa6.24□□□□□ -1.41
USP39-212ENST00000465514 NTM-AS1Q6ZSK4 140 aa6.24□□□□□ -1.41
USP39-212ENST00000465514 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.24□□□□□ -1.41
USP39-212ENST00000465514 ARPC5O15511 151 aa6.23□□□□□ -1.41
USP39-212ENST00000465514 SNAI2O43623 268 aa6.23□□□□□ -1.41
USP39-212ENST00000465514 CXCL1P09341 107 aa6.23□□□□□ -1.41
USP39-212ENST00000465514 RBX1P62877 108 aa6.23□□□□□ -1.41
USP39-212ENST00000465514 GAGE6Q13070 117 aa6.23□□□□□ -1.41
USP39-212ENST00000465514 SPANXN1Q5VSR9 72 aa6.23□□□□□ -1.41
USP39-212ENST00000465514 KRTAP26-1Q6PEX3 210 aa6.23□□□□□ -1.41
USP39-212ENST00000465514 CLPSL2Q6UWE3 100 aa6.23□□□□□ -1.41
USP39-212ENST00000465514 LINC00269Q8N2A0 174 aa6.23□□□□□ -1.41
USP39-212ENST00000465514 C9orf163Q8N9P6 203 aa6.23□□□□□ -1.41
USP39-212ENST00000465514 MLST8Q9BVC4 326 aa6.23□□□□□ -1.41
USP39-212ENST00000465514 PRR34Q9NV39 138 aa6.23□□□□□ -1.41
USP39-212ENST00000465514 A0A1B0GV50 99 aa6.22□□□□□ -1.41
USP39-212ENST00000465514 OR5AL1P0C617 328 aa6.22□□□□□ -1.41
USP39-212ENST00000465514 TMEM97Q5BJF2 176 aa6.22□□□□□ -1.41
USP39-212ENST00000465514 BAGE2Q86Y30 109 aa6.22□□□□□ -1.41
USP39-212ENST00000465514 SFT2D1Q8WV19 159 aa6.22□□□□□ -1.41
USP39-212ENST00000465514 MBD3L1Q8WWY6 194 aa6.22□□□□□ -1.41
USP39-212ENST00000465514 DERL1Q9BUN8 251 aa6.22□□□□□ -1.41
USP39-212ENST00000465514 DPH3P1Q9H4G8 78 aa6.22□□□□□ -1.41
USP39-212ENST00000465514 VAX2Q9UIW0 290 aa6.22□□□□□ -1.41
USP39-212ENST00000465514 KIF25-AS1Q9Y6Z4 181 aa6.22□□□□□ -1.41
USP39-212ENST00000465514 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.22□□□□□ -1.41
USP39-212ENST00000465514 TRBV25-1A0A075B6N4 114 aa6.21□□□□□ -1.42
USP39-212ENST00000465514 PANO1I0J062 215 aa6.21□□□□□ -1.42
USP39-212ENST00000465514 SMIM17P0DL12 118 aa6.21□□□□□ -1.42
USP39-212ENST00000465514 Q6ZNX1 250 aa6.21□□□□□ -1.42
USP39-212ENST00000465514 SDIM1Q6ZPB5 146 aa6.21□□□□□ -1.42
USP39-212ENST00000465514 FAM213BQ8TBF2 198 aa6.21□□□□□ -1.42
USP39-212ENST00000465514 A0A0U1RQV1 116 aa6.2□□□□□ -1.42
USP39-212ENST00000465514 SMLR1H3BR10 107 aa6.2□□□□□ -1.42
USP39-212ENST00000465514 PFDN1O60925 122 aa6.2□□□□□ -1.42
USP39-212ENST00000465514 TMUB2Q71RG4 321 aa6.2□□□□□ -1.42
USP39-212ENST00000465514 CLRN3Q8NCR9 226 aa6.2□□□□□ -1.42
USP39-212ENST00000465514 AP1S3Q96PC3 154 aa6.2□□□□□ -1.42
USP39-212ENST00000465514 IGLV10-54A0A075B6I4 117 aa6.19□□□□□ -1.42
USP39-212ENST00000465514 IGHV1-24A0A0C4DH33 117 aa6.19□□□□□ -1.42
USP39-212ENST00000465514 UMAD1C9J7I0 102 aa6.19□□□□□ -1.42
USP39-212ENST00000465514 M0QY20 66 aa6.19□□□□□ -1.42
USP39-212ENST00000465514 REG3AQ06141 175 aa6.19□□□□□ -1.42
USP39-212ENST00000465514 IQCJQ1A5X6 159 aa6.19□□□□□ -1.42
USP39-212ENST00000465514 KCNRGQ8N5I3 272 aa6.19□□□□□ -1.42
USP39-212ENST00000465514 LINC01600Q96MT4 127 aa6.19□□□□□ -1.42
USP39-212ENST00000465514 A0A1B0GVG6 124 aa6.18□□□□□ -1.42
USP39-212ENST00000465514 hDV102S1A0JD36 115 aa6.18□□□□□ -1.42
USP39-212ENST00000465514 MGPP08493 103 aa6.18□□□□□ -1.42
USP39-212ENST00000465514 GZMBP10144 247 aa6.18□□□□□ -1.42
USP39-212ENST00000465514 RPL35P42766 123 aaKnown RBP6.18□□□□□ -1.42
USP39-212ENST00000465514 CNBPP62633 177 aaKnown RBP6.18□□□□□ -1.42
USP39-212ENST00000465514 C20orf203Q8NBC4 194 aa6.18□□□□□ -1.42
USP39-212ENST00000465514 TPPP3Q9BW30 176 aa6.18□□□□□ -1.42
USP39-212ENST00000465514 IGLV4-60A0A075B6I1 120 aa6.17□□□□□ -1.42
USP39-212ENST00000465514 TRAV8-4A0A0B4J246 113 aa6.17□□□□□ -1.42
USP39-212ENST00000465514 A0A0D9SG52 128 aa6.17□□□□□ -1.42
USP39-212ENST00000465514 H7C1H1 209 aa6.17□□□□□ -1.42
USP39-212ENST00000465514 P01737 135 aa6.17□□□□□ -1.42
USP39-212ENST00000465514 IGLC6P0CF74 106 aa6.17□□□□□ -1.42
USP39-212ENST00000465514 RAB5CP51148 216 aa6.17□□□□□ -1.42
USP39-212ENST00000465514 NKX2-5P52952 324 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms