RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 NAT8BQ9UHF3 227 aa13.82□□□□□ -0.2
SKA3-205ENST00000465471 A0A087WWC5 75 aa13.81□□□□□ -0.2
SKA3-205ENST00000465471 H7C1H1 209 aa13.81□□□□□ -0.2
SKA3-205ENST00000465471 K7EP13 123 aa13.81□□□□□ -0.2
SKA3-205ENST00000465471 ADCYAP1P18509 176 aa13.81□□□□□ -0.2
SKA3-205ENST00000465471 BTF3P20290 206 aaKnown RBP13.81□□□□□ -0.2
SKA3-205ENST00000465471 BORCS7Q96B45 105 aa13.81□□□□□ -0.2
SKA3-205ENST00000465471 HECTD4Q9Y4D8 3996 aa13.81□□□□□ -0.2
SKA3-205ENST00000465471 TRAV8-6A0A0B4J262 113 aa13.8□□□□□ -0.2
SKA3-205ENST00000465471 LINC00862A6NCI5 91 aa13.8□□□□□ -0.2
SKA3-205ENST00000465471 LINC01556Q5JQF7 62 aa13.8□□□□□ -0.2
SKA3-205ENST00000465471 OR10J3Q5JRS4 329 aa13.8□□□□□ -0.2
SKA3-205ENST00000465471 LINC00336Q6ZUF6 198 aa13.8□□□□□ -0.2
SKA3-205ENST00000465471 C6orf223Q8N319 242 aa13.8□□□□□ -0.2
SKA3-205ENST00000465471 IGHV3-38A0A0C4DH36 116 aa13.79□□□□□ -0.2
SKA3-205ENST00000465471 TMEM218A2RU14 115 aa13.79□□□□□ -0.2
SKA3-205ENST00000465471 RASL11AQ6T310 242 aa13.79□□□□□ -0.2
SKA3-205ENST00000465471 SMIM15Q7Z3B0 74 aa13.79□□□□□ -0.2
SKA3-205ENST00000465471 COMMD7Q86VX2 200 aa13.79□□□□□ -0.2
SKA3-205ENST00000465471 DNAJC30Q96LL9 226 aa13.79□□□□□ -0.2
SKA3-205ENST00000465471 TMEM191AQ9H0A3 160 aa13.78□□□□□ -0.2
SKA3-205ENST00000465471 PPP1R2P9O14990 202 aa13.77□□□□□ -0.21
SKA3-205ENST00000465471 DAZ4Q86SG3 579 aaKnown RBP13.77□□□□□ -0.21
SKA3-205ENST00000465471 GATD1Q8NB37 220 aa13.77□□□□□ -0.21
SKA3-205ENST00000465471 DAZ3Q9NR90 486 aaKnown RBP13.77□□□□□ -0.21
SKA3-205ENST00000465471 RIGQ13278 110 aa13.76□□□□□ -0.21
SKA3-205ENST00000465471 FRZBQ92765 325 aa13.76□□□□□ -0.21
SKA3-205ENST00000465471 NIT2Q9NQR4 276 aa13.76□□□□□ -0.21
SKA3-205ENST00000465471 TRAV9-2A0A087WT02 112 aa13.75□□□□□ -0.21
SKA3-205ENST00000465471 TRAV26-2A0A0B4J265 109 aa13.75□□□□□ -0.21
SKA3-205ENST00000465471 TNFRSF18Q9Y5U5 241 aa13.75□□□□□ -0.21
SKA3-205ENST00000465471 TRBV6-8A0A0A6YYG3 113 aa13.74□□□□□ -0.21
SKA3-205ENST00000465471 C10orf126Q8N4M7 172 aa13.74□□□□□ -0.21
SKA3-205ENST00000465471 ANAPC16Q96DE5 110 aa13.74□□□□□ -0.21
SKA3-205ENST00000465471 RNF185Q96GF1 192 aa13.74□□□□□ -0.21
SKA3-205ENST00000465471 SEC11CQ9BY50 192 aa13.74□□□□□ -0.21
SKA3-205ENST00000465471 PKD1P98161 4303 aa13.73□□□□□ -0.21
SKA3-205ENST00000465471 F8W036 122 aa13.73□□□□□ -0.21
SKA3-205ENST00000465471 MT-ND4LP03901 98 aa13.73□□□□□ -0.21
SKA3-205ENST00000465471 Q6ZRN7 208 aaPredicted RBP13.73□□□□□ -0.21
SKA3-205ENST00000465471 NTM-AS1Q6ZSK4 140 aa13.73□□□□□ -0.21
SKA3-205ENST00000465471 A0A1B0GW15 77 aa13.72□□□□□ -0.21
SKA3-205ENST00000465471 A0A1B0GXF2 115 aa13.72□□□□□ -0.21
SKA3-205ENST00000465471 PRSS29PA6NIE9 313 aa13.72□□□□□ -0.21
SKA3-205ENST00000465471 TMEM97Q5BJF2 176 aa13.72□□□□□ -0.21
SKA3-205ENST00000465471 NIT1Q86X76 327 aa13.72□□□□□ -0.21
SKA3-205ENST00000465471 Q8N3U1 123 aa13.72□□□□□ -0.21
SKA3-205ENST00000465471 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.72□□□□□ -0.21
SKA3-205ENST00000465471 A0A1B0GVY2 172 aa13.71□□□□□ -0.21
SKA3-205ENST00000465471 RAB4AP20338 218 aa13.71□□□□□ -0.21
SKA3-205ENST00000465471 C10orf91Q5T1B1 145 aa13.71□□□□□ -0.21
SKA3-205ENST00000465471 AMN1Q8IY45 258 aa13.71□□□□□ -0.21
SKA3-205ENST00000465471 RPL39LQ96EH5 51 aaKnown RBP13.71□□□□□ -0.21
SKA3-205ENST00000465471 IBA57-AS1B1ANH7 110 aa13.7□□□□□ -0.22
SKA3-205ENST00000465471 IGHV3-30P01768 117 aa13.7□□□□□ -0.22
SKA3-205ENST00000465471 IGHV3-33P01772 117 aa13.7□□□□□ -0.22
SKA3-205ENST00000465471 IGHV3-30-3P0DP02 117 aa13.7□□□□□ -0.22
SKA3-205ENST00000465471 IGHV3-30-5P0DP03 117 aa13.7□□□□□ -0.22
SKA3-205ENST00000465471 CHCHD7Q9BUK0 85 aa13.7□□□□□ -0.22
SKA3-205ENST00000465471 DNAH11Q96DT5 4516 aa13.69□□□□□ -0.22
SKA3-205ENST00000465471 TRBV6-5A0A0K0K1A5 114 aa13.69□□□□□ -0.22
SKA3-205ENST00000465471 GAS8-AS1O95177 125 aa13.69□□□□□ -0.22
SKA3-205ENST00000465471 MRAP2Q96G30 205 aa13.69□□□□□ -0.22
SKA3-205ENST00000465471 HBBP68871 147 aa13.68□□□□□ -0.22
SKA3-205ENST00000465471 TNP2Q05952 138 aa13.68□□□□□ -0.22
SKA3-205ENST00000465471 LAGE3Q14657 143 aa13.68□□□□□ -0.22
SKA3-205ENST00000465471 IQCJQ1A5X6 159 aa13.68□□□□□ -0.22
SKA3-205ENST00000465471 FAM104BQ5XKR9 115 aa13.68□□□□□ -0.22
SKA3-205ENST00000465471 MRPL54Q6P161 138 aaKnown RBP13.68□□□□□ -0.22
SKA3-205ENST00000465471 ATP5L2Q7Z4Y8 100 aa13.68□□□□□ -0.22
SKA3-205ENST00000465471 BIRC6Q9NR09 4857 aa13.68□□□□□ -0.22
SKA3-205ENST00000465471 CAMPP49913 170 aa13.67□□□□□ -0.22
SKA3-205ENST00000465471 NFE4Q86UQ8 179 aa13.67□□□□□ -0.22
SKA3-205ENST00000465471 CARHSP1Q9Y2V2 147 aaKnown RBP13.67□□□□□ -0.22
SKA3-205ENST00000465471 S100A8P05109 93 aa13.66□□□□□ -0.22
SKA3-205ENST00000465471 PKHD1P08F94 4074 aa13.65□□□□□ -0.22
SKA3-205ENST00000465471 TRBV25-1A0A075B6N4 114 aa13.65□□□□□ -0.22
SKA3-205ENST00000465471 IGHV1-24A0A0C4DH33 117 aa13.65□□□□□ -0.22
SKA3-205ENST00000465471 RPS10P46783 165 aaKnown RBP13.65□□□□□ -0.22
SKA3-205ENST00000465471 KCNIP4Q6PIL6 250 aa13.65□□□□□ -0.22
SKA3-205ENST00000465471 SDHAF1A6NFY7 115 aa13.64□□□□□ -0.23
SKA3-205ENST00000465471 MRPL51Q4U2R6 128 aaKnown RBP13.64□□□□□ -0.23
SKA3-205ENST00000465471 IMMP2LQ96T52 175 aa13.64□□□□□ -0.23
SKA3-205ENST00000465471 CTDSP1Q9GZU7 261 aa13.64□□□□□ -0.23
SKA3-205ENST00000465471 URGCP-MRPS24S4R325 110 aa13.64□□□□□ -0.23
SKA3-205ENST00000465471 PKIAP61925 76 aa13.63□□□□□ -0.23
SKA3-205ENST00000465471 COTL1Q14019 142 aa13.63□□□□□ -0.23
SKA3-205ENST00000465471 MPV17L2Q567V2 206 aa13.63□□□□□ -0.23
SKA3-205ENST00000465471 NRACQ8N912 160 aa13.63□□□□□ -0.23
SKA3-205ENST00000465471 CHCHD5Q9BSY4 110 aa13.63□□□□□ -0.23
SKA3-205ENST00000465471 A0A087WX48 190 aa13.62□□□□□ -0.23
SKA3-205ENST00000465471 SMKR1H3BMG3 65 aa13.62□□□□□ -0.23
SKA3-205ENST00000465471 NCR2O95944 276 aa13.62□□□□□ -0.23
SKA3-205ENST00000465471 POLR2KP53803 58 aaKnown RBP13.62□□□□□ -0.23
SKA3-205ENST00000465471 TMEM70Q9BUB7 260 aa13.62□□□□□ -0.23
SKA3-205ENST00000465471 ST20Q9HBF5 79 aa13.61□□□□□ -0.23
SKA3-205ENST00000465471 PPP1R17O96001 155 aa13.6□□□□□ -0.23
SKA3-205ENST00000465471 ATRAIDQ6UW56 229 aa13.6□□□□□ -0.23
SKA3-205ENST00000465471 BTF3L4Q96K17 158 aa13.6□□□□□ -0.23
SKA3-205ENST00000465471 TMEM243Q9BU79 118 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms