RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 MPV17L2Q567V2 206 aa13.6□□□□□ -0.23
CSPG5-204ENST00000465441 C15orf54Q8N8G6 183 aa13.6□□□□□ -0.23
CSPG5-204ENST00000465441 CHAC1Q9BUX1 264 aa13.6□□□□□ -0.23
CSPG5-204ENST00000465441 C1orf43Q9BWL3 253 aa13.6□□□□□ -0.23
CSPG5-204ENST00000465441 F5H697 171 aa13.59□□□□□ -0.23
CSPG5-204ENST00000465441 H2AFB1P0C5Y9 115 aa13.59□□□□□ -0.23
CSPG5-204ENST00000465441 DEFB104AQ8WTQ1 72 aa13.59□□□□□ -0.23
CSPG5-204ENST00000465441 KIF25-AS1Q9Y6Z4 181 aa13.59□□□□□ -0.23
CSPG5-204ENST00000465441 ANGP03950 147 aaKnown RBP13.58□□□□□ -0.24
CSPG5-204ENST00000465441 NTM-AS1Q6ZSK4 140 aa13.58□□□□□ -0.24
CSPG5-204ENST00000465441 CIRBP-AS1Q8TBR5 109 aa13.58□□□□□ -0.24
CSPG5-204ENST00000465441 CHCHD5Q9BSY4 110 aa13.58□□□□□ -0.24
CSPG5-204ENST00000465441 KRTAP29-1A8MX34 341 aaPredicted RBP13.57□□□□□ -0.24
CSPG5-204ENST00000465441 CRPP02741 224 aa13.57□□□□□ -0.24
CSPG5-204ENST00000465441 C14orf177Q52M58 125 aa13.57□□□□□ -0.24
CSPG5-204ENST00000465441 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.57□□□□□ -0.24
CSPG5-204ENST00000465441 AKAP14Q86UN6 197 aa13.56□□□□□ -0.24
CSPG5-204ENST00000465441 VAX2Q9UIW0 290 aa13.56□□□□□ -0.24
CSPG5-204ENST00000465441 RPL35P42766 123 aaKnown RBP13.55□□□□□ -0.24
CSPG5-204ENST00000465441 CCL20P78556 96 aa13.55□□□□□ -0.24
CSPG5-204ENST00000465441 SMIM17P0DL12 118 aa13.54□□□□□ -0.24
CSPG5-204ENST00000465441 KRTAP10-4P60372 401 aaPredicted RBP13.54□□□□□ -0.24
CSPG5-204ENST00000465441 TMEM97Q5BJF2 176 aa13.54□□□□□ -0.24
CSPG5-204ENST00000465441 EIF5AL1Q6IS14 154 aaKnown RBP13.54□□□□□ -0.24
CSPG5-204ENST00000465441 DERL1Q9BUN8 251 aa13.54□□□□□ -0.24
CSPG5-204ENST00000465441 hCG_2014768A0A024R1R8 64 aa13.53□□□□□ -0.24
CSPG5-204ENST00000465441 RAB5CP51148 216 aa13.53□□□□□ -0.24
CSPG5-204ENST00000465441 PKIAP61925 76 aa13.53□□□□□ -0.24
CSPG5-204ENST00000465441 GAGE6Q13070 117 aa13.53□□□□□ -0.24
CSPG5-204ENST00000465441 MIAQ16674 131 aa13.53□□□□□ -0.24
CSPG5-204ENST00000465441 USP17L23D6RBM5 183 aa13.52□□□□□ -0.25
CSPG5-204ENST00000465441 GZMBP10144 247 aa13.52□□□□□ -0.25
CSPG5-204ENST00000465441 RBX1P62877 108 aa13.52□□□□□ -0.25
CSPG5-204ENST00000465441 GNG13Q9P2W3 67 aa13.52□□□□□ -0.25
CSPG5-204ENST00000465441 IGLV2-8P01709 118 aa13.51□□□□□ -0.25
CSPG5-204ENST00000465441 HLA-DQA1P01909 254 aa13.51□□□□□ -0.25
CSPG5-204ENST00000465441 SLC51BQ86UW2 128 aa13.51□□□□□ -0.25
CSPG5-204ENST00000465441 C11orf52Q96A22 123 aa13.51□□□□□ -0.25
CSPG5-204ENST00000465441 AP1S3Q96PC3 154 aa13.51□□□□□ -0.25
CSPG5-204ENST00000465441 PRR34Q9NV39 138 aa13.51□□□□□ -0.25
CSPG5-204ENST00000465441 TRBV25-1A0A075B6N4 114 aa13.5□□□□□ -0.25
CSPG5-204ENST00000465441 TRAV1-1A0A0B4J248 108 aa13.5□□□□□ -0.25
CSPG5-204ENST00000465441 PRSS1P07477 247 aa13.5□□□□□ -0.25
CSPG5-204ENST00000465441 IGLC6P0CF74 106 aa13.5□□□□□ -0.25
CSPG5-204ENST00000465441 SULT1A2P50226 295 aa13.5□□□□□ -0.25
CSPG5-204ENST00000465441 KRTAP26-1Q6PEX3 210 aa13.5□□□□□ -0.25
CSPG5-204ENST00000465441 LINC00269Q8N2A0 174 aa13.5□□□□□ -0.25
CSPG5-204ENST00000465441 DAZAP1Q96EP5 407 aaKnown RBP13.5□□□□□ -0.25
CSPG5-204ENST00000465441 MANBALQ9NQG1 85 aa13.5□□□□□ -0.25
CSPG5-204ENST00000465441 M0QY20 66 aa13.49□□□□□ -0.25
CSPG5-204ENST00000465441 CENPWQ5EE01 88 aa13.49□□□□□ -0.25
CSPG5-204ENST00000465441 CLPSL2Q6UWE3 100 aa13.49□□□□□ -0.25
CSPG5-204ENST00000465441 C9orf62Q8N4C0 152 aa13.49□□□□□ -0.25
CSPG5-204ENST00000465441 FER1L6-AS1Q8NA97 138 aa13.49□□□□□ -0.25
CSPG5-204ENST00000465441 OR2D3Q8NGH3 330 aa13.49□□□□□ -0.25
CSPG5-204ENST00000465441 TPPP3Q9BW30 176 aa13.49□□□□□ -0.25
CSPG5-204ENST00000465441 LRP1Q07954 4544 aaKnown RBP13.48□□□□□ -0.25
CSPG5-204ENST00000465441 RAB19A4D1S5 217 aa13.48□□□□□ -0.25
CSPG5-204ENST00000465441 C19orf71A6NCJ1 209 aa13.48□□□□□ -0.25
CSPG5-204ENST00000465441 MGPP08493 103 aa13.48□□□□□ -0.25
CSPG5-204ENST00000465441 RPS20P60866 119 aaKnown RBP13.48□□□□□ -0.25
CSPG5-204ENST00000465441 IQCJQ1A5X6 159 aa13.48□□□□□ -0.25
CSPG5-204ENST00000465441 DGAT2L7PQ6IED9 249 aa13.48□□□□□ -0.25
CSPG5-204ENST00000465441 C9orf163Q8N9P6 203 aa13.47□□□□□ -0.25
CSPG5-204ENST00000465441 FAT3Q8TDW7 4589 aa13.46□□□□□ -0.25
CSPG5-204ENST00000465441 IGHV1-24A0A0C4DH33 117 aa13.46□□□□□ -0.25
CSPG5-204ENST00000465441 CACNG7P62955 275 aa13.46□□□□□ -0.25
CSPG5-204ENST00000465441 SUMO4Q6EEV6 95 aa13.46□□□□□ -0.25
CSPG5-204ENST00000465441 TEX46H3BTG2 121 aa13.45□□□□□ -0.26
CSPG5-204ENST00000465441 H7C1H1 209 aa13.44□□□□□ -0.26
CSPG5-204ENST00000465441 NKX2-5P52952 324 aaPredicted RBP13.44□□□□□ -0.26
CSPG5-204ENST00000465441 C20orf203Q8NBC4 194 aa13.44□□□□□ -0.26
CSPG5-204ENST00000465441 GNG4P50150 75 aa13.43□□□□□ -0.26
CSPG5-204ENST00000465441 REG3AQ06141 175 aa13.43□□□□□ -0.26
CSPG5-204ENST00000465441 LYZL1Q6UWQ5 148 aa13.43□□□□□ -0.26
CSPG5-204ENST00000465441 IGLV10-54A0A075B6I4 117 aa13.42□□□□□ -0.26
CSPG5-204ENST00000465441 A0A1B0GVG6 124 aa13.42□□□□□ -0.26
CSPG5-204ENST00000465441 F2Z2F3 143 aa13.42□□□□□ -0.26
CSPG5-204ENST00000465441 OXTP01178 125 aa13.42□□□□□ -0.26
CSPG5-204ENST00000465441 RASL11AQ6T310 242 aa13.42□□□□□ -0.26
CSPG5-204ENST00000465441 SMIM12Q96EX1 92 aa13.42□□□□□ -0.26
CSPG5-204ENST00000465441 MED9Q9NWA0 146 aa13.42□□□□□ -0.26
CSPG5-204ENST00000465441 PKHD1L1Q86WI1 4243 aa13.42□□□□□ -0.26
CSPG5-204ENST00000465441 IGLV4-60A0A075B6I1 120 aa13.41□□□□□ -0.26
CSPG5-204ENST00000465441 XKRY2A2RUG3 117 aa13.41□□□□□ -0.26
CSPG5-204ENST00000465441 P01737 135 aa13.41□□□□□ -0.26
CSPG5-204ENST00000465441 NTF3P20783 257 aa13.41□□□□□ -0.26
CSPG5-204ENST00000465441 RPL37AP61513 92 aaKnown RBP13.41□□□□□ -0.26
CSPG5-204ENST00000465441 MEF2BQ02080 365 aaPredicted RBP13.41□□□□□ -0.26
CSPG5-204ENST00000465441 SDIM1Q6ZPB5 146 aa13.41□□□□□ -0.26
CSPG5-204ENST00000465441 CLRN3Q8NCR9 226 aa13.41□□□□□ -0.26
CSPG5-204ENST00000465441 NIT2Q9NQR4 276 aa13.41□□□□□ -0.26
CSPG5-204ENST00000465441 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.41□□□□□ -0.26
CSPG5-204ENST00000465441 TRBV20OR9-2A0A075B6H5 130 aa13.4□□□□□ -0.26
CSPG5-204ENST00000465441 A0A1B0GUV1 79 aa13.4□□□□□ -0.26
CSPG5-204ENST00000465441 PANO1I0J062 215 aa13.4□□□□□ -0.26
CSPG5-204ENST00000465441 PDE6DO43924 150 aa13.4□□□□□ -0.26
CSPG5-204ENST00000465441 IFNA1P01562 189 aa13.4□□□□□ -0.26
CSPG5-204ENST00000465441 TRGC1P0CF51 173 aa13.4□□□□□ -0.26
CSPG5-204ENST00000465441 TMEM243Q9BU79 118 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms