RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 GAGE4Q13068 117 aa9.38□□□□□ -0.91
LIMD1-203ENST00000465039 GAGE5Q13069 117 aa9.38□□□□□ -0.91
LIMD1-203ENST00000465039 RIGQ13278 110 aa9.38□□□□□ -0.91
LIMD1-203ENST00000465039 GAGE13Q4V321 117 aa9.38□□□□□ -0.91
LIMD1-203ENST00000465039 DAZ4Q86SG3 579 aaKnown RBP9.38□□□□□ -0.91
LIMD1-203ENST00000465039 ANAPC16Q96DE5 110 aa9.38□□□□□ -0.91
LIMD1-203ENST00000465039 SEC11CQ9BY50 192 aa9.38□□□□□ -0.91
LIMD1-203ENST00000465039 TMEM191AQ9H0A3 160 aa9.38□□□□□ -0.91
LIMD1-203ENST00000465039 DAZ3Q9NR90 486 aaKnown RBP9.38□□□□□ -0.91
LIMD1-203ENST00000465039 IGLV2-18A0A075B6J9 118 aa9.37□□□□□ -0.91
LIMD1-203ENST00000465039 MGPP08493 103 aa9.37□□□□□ -0.91
LIMD1-203ENST00000465039 LINC01556Q5JQF7 62 aa9.37□□□□□ -0.91
LIMD1-203ENST00000465039 SUMO4Q6EEV6 95 aa9.37□□□□□ -0.91
LIMD1-203ENST00000465039 RASL11AQ6T310 242 aa9.37□□□□□ -0.91
LIMD1-203ENST00000465039 COMMD7Q86VX2 200 aa9.37□□□□□ -0.91
LIMD1-203ENST00000465039 NEXN-AS1Q8NBZ9 246 aa9.37□□□□□ -0.91
LIMD1-203ENST00000465039 NUP35Q8NFH5 326 aa9.37□□□□□ -0.91
LIMD1-203ENST00000465039 IGHV3-38A0A0C4DH36 116 aa9.36□□□□□ -0.91
LIMD1-203ENST00000465039 SSTP61278 116 aa9.36□□□□□ -0.91
LIMD1-203ENST00000465039 PKIAP61925 76 aa9.36□□□□□ -0.91
LIMD1-203ENST00000465039 ATP5L2Q7Z4Y8 100 aa9.36□□□□□ -0.91
LIMD1-203ENST00000465039 CHCHD7Q9BUK0 85 aa9.36□□□□□ -0.91
LIMD1-203ENST00000465039 NIT2Q9NQR4 276 aa9.36□□□□□ -0.91
LIMD1-203ENST00000465039 OR10J3Q5JRS4 329 aa9.35□□□□□ -0.91
LIMD1-203ENST00000465039 C1orf134Q5TEV5 83 aa9.35□□□□□ -0.91
LIMD1-203ENST00000465039 WFDC10BQ8IUB3 73 aa9.35□□□□□ -0.91
LIMD1-203ENST00000465039 Q9UF83 564 aa9.35□□□□□ -0.91
LIMD1-203ENST00000465039 TNFRSF18Q9Y5U5 241 aa9.35□□□□□ -0.91
LIMD1-203ENST00000465039 F8W036 122 aa9.34□□□□□ -0.91
LIMD1-203ENST00000465039 PPP1R17O96001 155 aa9.34□□□□□ -0.91
LIMD1-203ENST00000465039 ADCYAP1P18509 176 aa9.34□□□□□ -0.91
LIMD1-203ENST00000465039 LAGE3Q14657 143 aa9.34□□□□□ -0.91
LIMD1-203ENST00000465039 C10orf91Q5T1B1 145 aa9.34□□□□□ -0.91
LIMD1-203ENST00000465039 C6orf223Q8N319 242 aa9.34□□□□□ -0.91
LIMD1-203ENST00000465039 MRAP2Q96G30 205 aa9.34□□□□□ -0.91
LIMD1-203ENST00000465039 IMMP2LQ96T52 175 aa9.34□□□□□ -0.91
LIMD1-203ENST00000465039 TRBV6-8A0A0A6YYG3 113 aa9.33□□□□□ -0.92
LIMD1-203ENST00000465039 KCNIP4Q6PIL6 250 aa9.33□□□□□ -0.92
LIMD1-203ENST00000465039 NFE4Q86UQ8 179 aa9.33□□□□□ -0.92
LIMD1-203ENST00000465039 GATD1Q8NB37 220 aa9.33□□□□□ -0.92
LIMD1-203ENST00000465039 CTDSP1Q9GZU7 261 aa9.33□□□□□ -0.92
LIMD1-203ENST00000465039 CARHSP1Q9Y2V2 147 aaKnown RBP9.33□□□□□ -0.92
LIMD1-203ENST00000465039 TRBV6-5A0A0K0K1A5 114 aa9.32□□□□□ -0.92
LIMD1-203ENST00000465039 M0R2N4 97 aa9.32□□□□□ -0.92
LIMD1-203ENST00000465039 HBBP68871 147 aa9.32□□□□□ -0.92
LIMD1-203ENST00000465039 KRTAP1-5Q9BYS1 174 aa9.32□□□□□ -0.92
LIMD1-203ENST00000465039 TMEM242Q9NWH2 141 aa9.32□□□□□ -0.92
LIMD1-203ENST00000465039 TRAV9-1A0A075B6T8 112 aa9.31□□□□□ -0.92
LIMD1-203ENST00000465039 A0A1B0GXF2 115 aa9.31□□□□□ -0.92
LIMD1-203ENST00000465039 DNAH10Q8IVF4 4471 aa9.31□□□□□ -0.92
LIMD1-203ENST00000465039 RTL8CO15255 209 aa9.3□□□□□ -0.92
LIMD1-203ENST00000465039 NCR2O95944 276 aa9.3□□□□□ -0.92
LIMD1-203ENST00000465039 RHEBQ15382 184 aa9.3□□□□□ -0.92
LIMD1-203ENST00000465039 IQCJQ1A5X6 159 aa9.3□□□□□ -0.92
LIMD1-203ENST00000465039 URGCP-MRPS24S4R325 110 aa9.3□□□□□ -0.92
LIMD1-203ENST00000465039 TRBV25-1A0A075B6N4 114 aa9.29□□□□□ -0.92
LIMD1-203ENST00000465039 RAB4AP20338 218 aa9.29□□□□□ -0.92
LIMD1-203ENST00000465039 ELOBQ15370 118 aa9.29□□□□□ -0.92
LIMD1-203ENST00000465039 FAM104BQ5XKR9 115 aa9.29□□□□□ -0.92
LIMD1-203ENST00000465039 NIT1Q86X76 327 aa9.29□□□□□ -0.92
LIMD1-203ENST00000465039 RNF185Q96GF1 192 aa9.29□□□□□ -0.92
LIMD1-203ENST00000465039 BTF3L4Q96K17 158 aa9.29□□□□□ -0.92
LIMD1-203ENST00000465039 DNAH2Q9P225 4427 aa9.29□□□□□ -0.92
LIMD1-203ENST00000465039 IGHV1-24A0A0C4DH33 117 aa9.28□□□□□ -0.92
LIMD1-203ENST00000465039 IBA57-AS1B1ANH7 110 aa9.28□□□□□ -0.92
LIMD1-203ENST00000465039 PPBPP02775 128 aa9.28□□□□□ -0.92
LIMD1-203ENST00000465039 NDUFA5Q16718 116 aa9.28□□□□□ -0.92
LIMD1-203ENST00000465039 AMN1Q8IY45 258 aa9.28□□□□□ -0.92
LIMD1-203ENST00000465039 A0A087WX48 190 aa9.27□□□□□ -0.93
LIMD1-203ENST00000465039 TRAV26-2A0A0B4J265 109 aa9.27□□□□□ -0.93
LIMD1-203ENST00000465039 CAMPP49913 170 aa9.27□□□□□ -0.93
LIMD1-203ENST00000465039 COTL1Q14019 142 aa9.27□□□□□ -0.93
LIMD1-203ENST00000465039 FRAS1Q86XX4 4008 aa9.27□□□□□ -0.93
LIMD1-203ENST00000465039 TRBV24-1A0A075B6N3 115 aa9.26□□□□□ -0.93
LIMD1-203ENST00000465039 TRAV8-3A0A0A6YYJ7 113 aa9.26□□□□□ -0.93
LIMD1-203ENST00000465039 TRBV27A0A0K0K1C4 114 aa9.26□□□□□ -0.93
LIMD1-203ENST00000465039 SDHAF1A6NFY7 115 aa9.26□□□□□ -0.93
LIMD1-203ENST00000465039 PHOX2AO14813 284 aa9.26□□□□□ -0.93
LIMD1-203ENST00000465039 MRPL54Q6P161 138 aaKnown RBP9.26□□□□□ -0.93
LIMD1-203ENST00000465039 Q6ZRN7 208 aaPredicted RBP9.26□□□□□ -0.93
LIMD1-203ENST00000465039 NTM-AS1Q6ZSK4 140 aa9.26□□□□□ -0.93
LIMD1-203ENST00000465039 ST20Q9HBF5 79 aa9.26□□□□□ -0.93
LIMD1-203ENST00000465039 PRSS29PA6NIE9 313 aa9.25□□□□□ -0.93
LIMD1-203ENST00000465039 H7C423 109 aa9.25□□□□□ -0.93
LIMD1-203ENST00000465039 RPL32P62910 135 aaKnown RBP9.25□□□□□ -0.93
LIMD1-203ENST00000465039 SVBPQ8N300 66 aa9.25□□□□□ -0.93
LIMD1-203ENST00000465039 RPL39LQ96EH5 51 aaKnown RBP9.25□□□□□ -0.93
LIMD1-203ENST00000465039 C20orf78Q9BR46 151 aa9.25□□□□□ -0.93
LIMD1-203ENST00000465039 CHCHD5Q9BSY4 110 aa9.25□□□□□ -0.93
LIMD1-203ENST00000465039 TMEM243Q9BU79 118 aa9.25□□□□□ -0.93
LIMD1-203ENST00000465039 LAMTOR2Q9Y2Q5 125 aa9.25□□□□□ -0.93
LIMD1-203ENST00000465039 COX11Q9Y6N1 276 aa9.25□□□□□ -0.93
LIMD1-203ENST00000465039 FAT2Q9NYQ8 4349 aa9.24□□□□□ -0.93
LIMD1-203ENST00000465039 DNAH17Q9UFH2 4485 aa9.24□□□□□ -0.93
LIMD1-203ENST00000465039 C7orf77A4D0Y5 90 aa9.24□□□□□ -0.93
LIMD1-203ENST00000465039 I3L3M4 83 aa9.24□□□□□ -0.93
LIMD1-203ENST00000465039 TCAPO15273 167 aa9.24□□□□□ -0.93
LIMD1-203ENST00000465039 S100PP25815 95 aa9.24□□□□□ -0.93
LIMD1-203ENST00000465039 CLRN3Q8NCR9 226 aa9.24□□□□□ -0.93
LIMD1-203ENST00000465039 TMEM70Q9BUB7 260 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms