RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 ZNF56Q15929 161 aa9.36□□□□□ -0.91
CLCNKA-204ENST00000464764 C19orf54Q5BKX5 351 aa9.36□□□□□ -0.91
CLCNKA-204ENST00000464764 Q6ZSV7 163 aa9.36□□□□□ -0.91
CLCNKA-204ENST00000464764 CHD8Q9HCK8 2581 aa9.36□□□□□ -0.91
CLCNKA-204ENST00000464764 NXPH4O95158 308 aa9.36□□□□□ -0.91
CLCNKA-204ENST00000464764 PRSS2P07478 247 aa9.36□□□□□ -0.91
CLCNKA-204ENST00000464764 MED14OSP0DP75 135 aa9.36□□□□□ -0.91
CLCNKA-204ENST00000464764 BLCAPP62952 87 aa9.36□□□□□ -0.91
CLCNKA-204ENST00000464764 C3orf56Q8N813 242 aa9.36□□□□□ -0.91
CLCNKA-204ENST00000464764 FAM223BA6NKX1 122 aa9.35□□□□□ -0.91
CLCNKA-204ENST00000464764 NHLRC4P0CG21 123 aaPredicted RBP9.35□□□□□ -0.91
CLCNKA-204ENST00000464764 RNASE13Q5GAN3 156 aaKnown RBP9.35□□□□□ -0.91
CLCNKA-204ENST00000464764 APRG1Q8IVJ8 170 aa9.35□□□□□ -0.91
CLCNKA-204ENST00000464764 FAM223AQ8IWN6 122 aa9.35□□□□□ -0.91
CLCNKA-204ENST00000464764 Q8N1Y9 231 aa9.35□□□□□ -0.91
CLCNKA-204ENST00000464764 TRBV27A0A0K0K1C4 114 aa9.35□□□□□ -0.91
CLCNKA-204ENST00000464764 TMEM223A0PJW6 202 aa9.35□□□□□ -0.91
CLCNKA-204ENST00000464764 SPXQ9BT56 116 aa9.35□□□□□ -0.91
CLCNKA-204ENST00000464764 MOB4Q9Y3A3 225 aa9.35□□□□□ -0.91
CLCNKA-204ENST00000464764 KLLNB2CW77 178 aa9.35□□□□□ -0.91
CLCNKA-204ENST00000464764 ZNF22P17026 224 aaPredicted RBP9.35□□□□□ -0.91
CLCNKA-204ENST00000464764 CEMP1Q6PRD7 247 aaPredicted RBP9.35□□□□□ -0.91
CLCNKA-204ENST00000464764 K7ENP7 123 aa9.34□□□□□ -0.91
CLCNKA-204ENST00000464764 SVIPQ8NHG7 77 aa9.34□□□□□ -0.91
CLCNKA-204ENST00000464764 CITED1Q99966 193 aa9.34□□□□□ -0.91
CLCNKA-204ENST00000464764 VCX2Q9H322 139 aa9.34□□□□□ -0.91
CLCNKA-204ENST00000464764 A8MZ25 164 aa9.34□□□□□ -0.91
CLCNKA-204ENST00000464764 M0QY20 66 aa9.34□□□□□ -0.91
CLCNKA-204ENST00000464764 HTN1P15515 57 aa9.34□□□□□ -0.91
CLCNKA-204ENST00000464764 TRAV8-3A0A0A6YYJ7 113 aa9.33□□□□□ -0.92
CLCNKA-204ENST00000464764 IGHV3-73A0A0B4J1V6 119 aa9.33□□□□□ -0.92
CLCNKA-204ENST00000464764 RHODO00212 210 aa9.33□□□□□ -0.92
CLCNKA-204ENST00000464764 LEPROTO15243 131 aa9.33□□□□□ -0.92
CLCNKA-204ENST00000464764 RPL32P62910 135 aaKnown RBP9.33□□□□□ -0.92
CLCNKA-204ENST00000464764 USP9YO00507 2555 aaPredicted RBP9.32□□□□□ -0.92
CLCNKA-204ENST00000464764 TMEM262E9PQX1 116 aa9.32□□□□□ -0.92
CLCNKA-204ENST00000464764 LGALS9O00182 355 aa9.32□□□□□ -0.92
CLCNKA-204ENST00000464764 TRIAP1O43715 76 aa9.32□□□□□ -0.92
CLCNKA-204ENST00000464764 PRM2P04554 102 aa9.32□□□□□ -0.92
CLCNKA-204ENST00000464764 TMEM95Q3KNT9 176 aa9.32□□□□□ -0.92
CLCNKA-204ENST00000464764 LINC01620Q4KN68 170 aa9.32□□□□□ -0.92
CLCNKA-204ENST00000464764 ADAMTSL4-AS1Q5T5F5 129 aa9.32□□□□□ -0.92
CLCNKA-204ENST00000464764 Q9UF83 564 aa9.32□□□□□ -0.92
CLCNKA-204ENST00000464764 PRRC2AP48634 2157 aaKnown RBP9.32□□□□□ -0.92
CLCNKA-204ENST00000464764 IGHV3-16A0A0C4DH30 117 aa9.31□□□□□ -0.92
CLCNKA-204ENST00000464764 A0A0J9YXY3 114 aa9.31□□□□□ -0.92
CLCNKA-204ENST00000464764 SNCGO76070 127 aa9.31□□□□□ -0.92
CLCNKA-204ENST00000464764 PROK1P58294 105 aa9.31□□□□□ -0.92
CLCNKA-204ENST00000464764 GAGE2BQ13066 116 aa9.31□□□□□ -0.92
CLCNKA-204ENST00000464764 GAGE2EQ4V326 116 aa9.31□□□□□ -0.92
CLCNKA-204ENST00000464764 GAGE2DQ9UEU5 116 aa9.31□□□□□ -0.92
CLCNKA-204ENST00000464764 SETD2Q9BYW2 2564 aaPredicted RBP9.31□□□□□ -0.92
CLCNKA-204ENST00000464764 IGHV4-38-2P0DP08 117 aa9.31□□□□□ -0.92
CLCNKA-204ENST00000464764 IGLV4-3A0A075B6K6 122 aa9.3□□□□□ -0.92
CLCNKA-204ENST00000464764 CCDC179H3BU77 68 aa9.3□□□□□ -0.92
CLCNKA-204ENST00000464764 SPINK13Q1W4C9 94 aa9.3□□□□□ -0.92
CLCNKA-204ENST00000464764 DCANP1Q8TF63 244 aa9.3□□□□□ -0.92
CLCNKA-204ENST00000464764 GAGE5Q13069 117 aa9.3□□□□□ -0.92
CLCNKA-204ENST00000464764 GAGE6Q13070 117 aa9.3□□□□□ -0.92
CLCNKA-204ENST00000464764 C20orf203Q8NBC4 194 aa9.3□□□□□ -0.92
CLCNKA-204ENST00000464764 DAZ1Q9NQZ3 744 aaKnown RBP9.3□□□□□ -0.92
CLCNKA-204ENST00000464764 H3BUX3 64 aa9.3□□□□□ -0.92
CLCNKA-204ENST00000464764 IGHV3-30-3P0DP02 117 aa9.3□□□□□ -0.92
CLCNKA-204ENST00000464764 TTC32Q5I0X7 151 aa9.3□□□□□ -0.92
CLCNKA-204ENST00000464764 ODF3Q96PU9 254 aa9.3□□□□□ -0.92
CLCNKA-204ENST00000464764 CENPEQ02224 2701 aa9.29□□□□□ -0.92
CLCNKA-204ENST00000464764 A0A0B4J2C4 111 aa9.29□□□□□ -0.92
CLCNKA-204ENST00000464764 TRBV6-5A0A0K0K1A5 114 aa9.29□□□□□ -0.92
CLCNKA-204ENST00000464764 M0R2P5 195 aa9.29□□□□□ -0.92
CLCNKA-204ENST00000464764 C10orf99Q6UWK7 81 aa9.29□□□□□ -0.92
CLCNKA-204ENST00000464764 NDUFV3P56181 108 aaKnown RBP9.29□□□□□ -0.92
CLCNKA-204ENST00000464764 ATXN8Q156A1 80 aa9.29□□□□□ -0.92
CLCNKA-204ENST00000464764 ZANQ9Y493 2812 aa9.29□□□□□ -0.92
CLCNKA-204ENST00000464764 CLEC2BQ92478 149 aa9.28□□□□□ -0.92
CLCNKA-204ENST00000464764 FAM104AQ969W3 186 aa9.28□□□□□ -0.92
CLCNKA-204ENST00000464764 C9orf85Q96MD7 179 aa9.28□□□□□ -0.92
CLCNKA-204ENST00000464764 IGHV1-69P01742 117 aa9.28□□□□□ -0.92
CLCNKA-204ENST00000464764 DAND5Q8N907 189 aa9.28□□□□□ -0.92
CLCNKA-204ENST00000464764 LITAFQ99732 161 aa9.28□□□□□ -0.92
CLCNKA-204ENST00000464764 MYO9AB2RTY4 2548 aa9.28□□□□□ -0.92
CLCNKA-204ENST00000464764 NSUN5P1Q3KNT7 163 aa9.28□□□□□ -0.92
CLCNKA-204ENST00000464764 C15orf53Q8NAA6 179 aa9.28□□□□□ -0.92
CLCNKA-204ENST00000464764 SPTBN4Q9H254 2564 aa9.27□□□□□ -0.93
CLCNKA-204ENST00000464764 A0A0U1RRA0 63 aa9.27□□□□□ -0.93
CLCNKA-204ENST00000464764 USMG5Q96IX5 58 aa9.27□□□□□ -0.93
CLCNKA-204ENST00000464764 KNCNA6PVL3 124 aa9.27□□□□□ -0.93
CLCNKA-204ENST00000464764 SMIM20Q8N5G0 67 aa9.27□□□□□ -0.93
CLCNKA-204ENST00000464764 DUX3Q96PT4 197 aa9.27□□□□□ -0.93
CLCNKA-204ENST00000464764 TRAV8-4A0A0B4J246 113 aa9.26□□□□□ -0.93
CLCNKA-204ENST00000464764 TRBV7-9A0A0J9YWB2 115 aa9.26□□□□□ -0.93
CLCNKA-204ENST00000464764 I3L3M4 83 aa9.26□□□□□ -0.93
CLCNKA-204ENST00000464764 IGHG2P01859 326 aa9.26□□□□□ -0.93
CLCNKA-204ENST00000464764 C2orf82Q6UX34 121 aa9.26□□□□□ -0.93
CLCNKA-204ENST00000464764 DUX5Q96PT3 197 aa9.26□□□□□ -0.93
CLCNKA-204ENST00000464764 WNK1Q9H4A3 2382 aa9.26□□□□□ -0.93
CLCNKA-204ENST00000464764 H7C423 109 aa9.26□□□□□ -0.93
CLCNKA-204ENST00000464764 CD28P10747 220 aa9.26□□□□□ -0.93
CLCNKA-204ENST00000464764 ID1P41134 155 aa9.26□□□□□ -0.93
CLCNKA-204ENST00000464764 TIMM21Q9BVV7 248 aa9.26□□□□□ -0.93
CLCNKA-204ENST00000464764 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms