RNA–Protein interactions for RNA: ENST00000462597.1

PDLIM4-204, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 767 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-204ENST00000462597 CLRN3Q8NCR9 226 aa12.74□□□□□ -0.37
PDLIM4-204ENST00000462597 Q9UF83 564 aa12.74□□□□□ -0.37
PDLIM4-204ENST00000462597 GAGE12JA6NER3 117 aa12.73□□□□□ -0.37
PDLIM4-204ENST00000462597 TNP2Q05952 138 aa12.73□□□□□ -0.37
PDLIM4-204ENST00000462597 GAGE1Q13065 139 aa12.73□□□□□ -0.37
PDLIM4-204ENST00000462597 GAGE4Q13068 117 aa12.73□□□□□ -0.37
PDLIM4-204ENST00000462597 GAGE5Q13069 117 aa12.73□□□□□ -0.37
PDLIM4-204ENST00000462597 GAGE13Q4V321 117 aa12.73□□□□□ -0.37
PDLIM4-204ENST00000462597 SUMO4Q6EEV6 95 aa12.73□□□□□ -0.37
PDLIM4-204ENST00000462597 NEGR1Q7Z3B1 354 aa12.73□□□□□ -0.37
PDLIM4-204ENST00000462597 CTDSP1Q9GZU7 261 aa12.73□□□□□ -0.37
PDLIM4-204ENST00000462597 C7orf77A4D0Y5 90 aa12.72□□□□□ -0.37
PDLIM4-204ENST00000462597 RHEBQ15382 184 aa12.72□□□□□ -0.37
PDLIM4-204ENST00000462597 TRBV10-1A0A0K0K1A3 114 aa12.71□□□□□ -0.37
PDLIM4-204ENST00000462597 CAMPP49913 170 aa12.71□□□□□ -0.37
PDLIM4-204ENST00000462597 ESRGQ1W209 222 aa12.71□□□□□ -0.37
PDLIM4-204ENST00000462597 SVBPQ8N300 66 aa12.71□□□□□ -0.37
PDLIM4-204ENST00000462597 C6orf223Q8N319 242 aa12.71□□□□□ -0.37
PDLIM4-204ENST00000462597 KRTAP1-5Q9BYS1 174 aa12.71□□□□□ -0.37
PDLIM4-204ENST00000462597 TMEM191AQ9H0A3 160 aa12.71□□□□□ -0.37
PDLIM4-204ENST00000462597 RPS10P5Q9NQ39 176 aa12.71□□□□□ -0.37
PDLIM4-204ENST00000462597 A0A1B0GW15 77 aa12.7□□□□□ -0.38
PDLIM4-204ENST00000462597 LINC00694P0DN24 101 aa12.7□□□□□ -0.38
PDLIM4-204ENST00000462597 SH2D6Q7Z4S9 175 aa12.7□□□□□ -0.38
PDLIM4-204ENST00000462597 NEXN-AS1Q8NBZ9 246 aa12.7□□□□□ -0.38
PDLIM4-204ENST00000462597 A0A087WWC5 75 aa12.69□□□□□ -0.38
PDLIM4-204ENST00000462597 TRAV26-2A0A0B4J265 109 aa12.69□□□□□ -0.38
PDLIM4-204ENST00000462597 A0A1B0GXF2 115 aa12.69□□□□□ -0.38
PDLIM4-204ENST00000462597 H7C1H1 209 aa12.69□□□□□ -0.38
PDLIM4-204ENST00000462597 M0QY20 66 aa12.69□□□□□ -0.38
PDLIM4-204ENST00000462597 SNAPINO95295 136 aa12.69□□□□□ -0.38
PDLIM4-204ENST00000462597 HBBP68871 147 aa12.69□□□□□ -0.38
PDLIM4-204ENST00000462597 RPL36AP83881 106 aaKnown RBP12.69□□□□□ -0.38
PDLIM4-204ENST00000462597 RPL36ALQ969Q0 106 aaKnown RBP12.69□□□□□ -0.38
PDLIM4-204ENST00000462597 Q9H8V8 135 aa12.69□□□□□ -0.38
PDLIM4-204ENST00000462597 KCNIP4Q6PIL6 250 aa12.68□□□□□ -0.38
PDLIM4-204ENST00000462597 LYPD5Q6UWN5 251 aa12.68□□□□□ -0.38
PDLIM4-204ENST00000462597 ATP5L2Q7Z4Y8 100 aa12.68□□□□□ -0.38
PDLIM4-204ENST00000462597 AMN1Q8IY45 258 aa12.68□□□□□ -0.38
PDLIM4-204ENST00000462597 ATP6V0E2Q8NHE4 81 aa12.68□□□□□ -0.38
PDLIM4-204ENST00000462597 IMMP2LQ96T52 175 aa12.68□□□□□ -0.38
PDLIM4-204ENST00000462597 TRBV7-3A0A075B6L6 115 aa12.67□□□□□ -0.38
PDLIM4-204ENST00000462597 S100A8P05109 93 aa12.67□□□□□ -0.38
PDLIM4-204ENST00000462597 RASL11AQ6T310 242 aa12.67□□□□□ -0.38
PDLIM4-204ENST00000462597 GATD1Q8NB37 220 aa12.67□□□□□ -0.38
PDLIM4-204ENST00000462597 RNF185Q96GF1 192 aa12.67□□□□□ -0.38
PDLIM4-204ENST00000462597 BTF3L4Q96K17 158 aa12.67□□□□□ -0.38
PDLIM4-204ENST00000462597 TMEM242Q9NWH2 141 aa12.67□□□□□ -0.38
PDLIM4-204ENST00000462597 UBE2D3P61077 147 aa12.66□□□□□ -0.38
PDLIM4-204ENST00000462597 UBE2D2P62837 147 aa12.66□□□□□ -0.38
PDLIM4-204ENST00000462597 MRPS16Q9Y3D3 137 aaKnown RBP12.66□□□□□ -0.38
PDLIM4-204ENST00000462597 URGCP-MRPS24S4R325 110 aa12.66□□□□□ -0.38
PDLIM4-204ENST00000462597 RYR1P21817 5038 aa12.65□□□□□ -0.38
PDLIM4-204ENST00000462597 RAB4AP20338 218 aa12.65□□□□□ -0.38
PDLIM4-204ENST00000462597 S100PP25815 95 aa12.65□□□□□ -0.38
PDLIM4-204ENST00000462597 UPK3BQ9BT76 320 aa12.65□□□□□ -0.38
PDLIM4-204ENST00000462597 TNFRSF18Q9Y5U5 241 aa12.65□□□□□ -0.38
PDLIM4-204ENST00000462597 FAM104BQ5XKR9 115 aa12.64□□□□□ -0.39
PDLIM4-204ENST00000462597 RPL39LQ96EH5 51 aaKnown RBP12.64□□□□□ -0.39
PDLIM4-204ENST00000462597 DNAJC30Q96LL9 226 aa12.64□□□□□ -0.39
PDLIM4-204ENST00000462597 GTSF1LQ9H1H1 148 aa12.64□□□□□ -0.39
PDLIM4-204ENST00000462597 NIT2Q9NQR4 276 aa12.64□□□□□ -0.39
PDLIM4-204ENST00000462597 IGHV3-38A0A0C4DH36 116 aa12.63□□□□□ -0.39
PDLIM4-204ENST00000462597 TTC32Q5I0X7 151 aa12.63□□□□□ -0.39
PDLIM4-204ENST00000462597 MRAP2Q96G30 205 aa12.63□□□□□ -0.39
PDLIM4-204ENST00000462597 TRAV9-1A0A075B6T8 112 aa12.62□□□□□ -0.39
PDLIM4-204ENST00000462597 C16orf90A8MZG2 172 aa12.62□□□□□ -0.39
PDLIM4-204ENST00000462597 SMKR1H3BMG3 65 aa12.62□□□□□ -0.39
PDLIM4-204ENST00000462597 GAS8-AS1O95177 125 aa12.62□□□□□ -0.39
PDLIM4-204ENST00000462597 NCR2O95944 276 aa12.62□□□□□ -0.39
PDLIM4-204ENST00000462597 TIRAPP58753 221 aa12.62□□□□□ -0.39
PDLIM4-204ENST00000462597 MRPL51Q4U2R6 128 aaKnown RBP12.62□□□□□ -0.39
PDLIM4-204ENST00000462597 OR10J3Q5JRS4 329 aa12.61□□□□□ -0.39
PDLIM4-204ENST00000462597 LELP1Q5T871 98 aa12.61□□□□□ -0.39
PDLIM4-204ENST00000462597 ATRAIDQ6UW56 229 aa12.61□□□□□ -0.39
PDLIM4-204ENST00000462597 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.61□□□□□ -0.39
PDLIM4-204ENST00000462597 FRZBQ92765 325 aa12.61□□□□□ -0.39
PDLIM4-204ENST00000462597 WFDC10BQ8IUB3 73 aa12.6□□□□□ -0.39
PDLIM4-204ENST00000462597 HSPG2P98160 4391 aa12.6□□□□□ -0.39
PDLIM4-204ENST00000462597 ABCA13Q86UQ4 5058 aa12.59□□□□□ -0.39
PDLIM4-204ENST00000462597 RPS10P46783 165 aaKnown RBP12.59□□□□□ -0.39
PDLIM4-204ENST00000462597 DAZ4Q86SG3 579 aaKnown RBP12.59□□□□□ -0.39
PDLIM4-204ENST00000462597 DAZ3Q9NR90 486 aaKnown RBP12.59□□□□□ -0.39
PDLIM4-204ENST00000462597 LRP1BQ9NZR2 4599 aa12.59□□□□□ -0.39
PDLIM4-204ENST00000462597 TRAV8-6A0A0B4J262 113 aa12.58□□□□□ -0.4
PDLIM4-204ENST00000462597 SIVA1O15304 175 aa12.58□□□□□ -0.4
PDLIM4-204ENST00000462597 CKS2P33552 79 aa12.58□□□□□ -0.4
PDLIM4-204ENST00000462597 D6R8Y8 96 aa12.57□□□□□ -0.4
PDLIM4-204ENST00000462597 SPATA12Q7Z6I5 190 aa12.57□□□□□ -0.4
PDLIM4-204ENST00000462597 TRBV6-5A0A0K0K1A5 114 aa12.56□□□□□ -0.4
PDLIM4-204ENST00000462597 SDHAF1A6NFY7 115 aa12.56□□□□□ -0.4
PDLIM4-204ENST00000462597 TMEM136Q6ZRR5 245 aa12.56□□□□□ -0.4
PDLIM4-204ENST00000462597 DEFB104AQ8WTQ1 72 aa12.56□□□□□ -0.4
PDLIM4-204ENST00000462597 KRTAP4-5Q9BYR2 181 aa12.56□□□□□ -0.4
PDLIM4-204ENST00000462597 ST20Q9HBF5 79 aa12.56□□□□□ -0.4
PDLIM4-204ENST00000462597 TRBV6-8A0A0A6YYG3 113 aa12.55□□□□□ -0.4
PDLIM4-204ENST00000462597 ELOBQ15370 118 aa12.55□□□□□ -0.4
PDLIM4-204ENST00000462597 NRACQ8N912 160 aa12.55□□□□□ -0.4
PDLIM4-204ENST00000462597 TGIF2-C20orf24A0A0A6YYL0 155 aa12.54□□□□□ -0.4
PDLIM4-204ENST00000462597 PPP1R17O96001 155 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms