RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 OR5AL1P0C617 328 aa10□□□□□ -0.81
SKA3-204ENST00000462482 SSTP61278 116 aa10□□□□□ -0.81
SKA3-204ENST00000462482 RPL37AP61513 92 aaKnown RBP10□□□□□ -0.81
SKA3-204ENST00000462482 DGAT2L7PQ6IED9 249 aa10□□□□□ -0.81
SKA3-204ENST00000462482 AP1S3Q96PC3 154 aa10□□□□□ -0.81
SKA3-204ENST00000462482 DERL1Q9BUN8 251 aa10□□□□□ -0.81
SKA3-204ENST00000462482 MUC21A0A0G2JKD1 596 aa9.99□□□□□ -0.81
SKA3-204ENST00000462482 MUC21A0A140T8X8 626 aa9.99□□□□□ -0.81
SKA3-204ENST00000462482 A0A1B0GV50 99 aa9.99□□□□□ -0.81
SKA3-204ENST00000462482 SCO2A0A1W2PP80 73 aa9.99□□□□□ -0.81
SKA3-204ENST00000462482 SNAI2O43623 268 aa9.99□□□□□ -0.81
SKA3-204ENST00000462482 SSBP4Q9BWG4 385 aaPredicted RBP9.99□□□□□ -0.81
SKA3-204ENST00000462482 H7C1H1 209 aa9.98□□□□□ -0.81
SKA3-204ENST00000462482 RBX1P62877 108 aa9.98□□□□□ -0.81
SKA3-204ENST00000462482 GAGE6Q13070 117 aa9.98□□□□□ -0.81
SKA3-204ENST00000462482 KCNRGQ8N5I3 272 aa9.98□□□□□ -0.81
SKA3-204ENST00000462482 MBD3L1Q8WWY6 194 aa9.98□□□□□ -0.81
SKA3-204ENST00000462482 CLPSL2Q6UWE3 100 aa9.97□□□□□ -0.81
SKA3-204ENST00000462482 TMUB2Q71RG4 321 aa9.97□□□□□ -0.81
SKA3-204ENST00000462482 LINC00269Q8N2A0 174 aa9.97□□□□□ -0.81
SKA3-204ENST00000462482 DAZAP1Q96EP5 407 aaKnown RBP9.97□□□□□ -0.81
SKA3-204ENST00000462482 MLST8Q9BVC4 326 aa9.97□□□□□ -0.81
SKA3-204ENST00000462482 VAX2Q9UIW0 290 aa9.97□□□□□ -0.81
SKA3-204ENST00000462482 IGHV1-24A0A0C4DH33 117 aa9.96□□□□□ -0.82
SKA3-204ENST00000462482 PRSS1P07477 247 aa9.96□□□□□ -0.82
SKA3-204ENST00000462482 MGPP08493 103 aa9.96□□□□□ -0.82
SKA3-204ENST00000462482 H2AFB1P0C5Y9 115 aa9.96□□□□□ -0.82
SKA3-204ENST00000462482 KRTAP10-4P60372 401 aaPredicted RBP9.96□□□□□ -0.82
SKA3-204ENST00000462482 EIF5AP63241 154 aaKnown RBP9.96□□□□□ -0.82
SKA3-204ENST00000462482 RGS21Q2M5E4 152 aa9.96□□□□□ -0.82
SKA3-204ENST00000462482 C9orf163Q8N9P6 203 aa9.96□□□□□ -0.82
SKA3-204ENST00000462482 CLRN3Q8NCR9 226 aa9.96□□□□□ -0.82
SKA3-204ENST00000462482 TPPP3Q9BW30 176 aa9.96□□□□□ -0.82
SKA3-204ENST00000462482 KANTRA0A1W2PQU2 76 aa9.95□□□□□ -0.82
SKA3-204ENST00000462482 G3V3Q6 166 aa9.95□□□□□ -0.82
SKA3-204ENST00000462482 ZNF345Q14585 488 aa9.95□□□□□ -0.82
SKA3-204ENST00000462482 NTM-AS1Q6ZSK4 140 aa9.95□□□□□ -0.82
SKA3-204ENST00000462482 PRR34Q9NV39 138 aa9.95□□□□□ -0.82
SKA3-204ENST00000462482 RPS20P60866 119 aaKnown RBP9.94□□□□□ -0.82
SKA3-204ENST00000462482 IQCJQ1A5X6 159 aa9.94□□□□□ -0.82
SKA3-204ENST00000462482 DPH3Q96FX2 82 aa9.94□□□□□ -0.82
SKA3-204ENST00000462482 AP5S1Q9NUS5 200 aa9.94□□□□□ -0.82
SKA3-204ENST00000462482 PLA2G2DQ9UNK4 145 aa9.94□□□□□ -0.82
SKA3-204ENST00000462482 A0A0D9SG52 128 aa9.93□□□□□ -0.82
SKA3-204ENST00000462482 XKRY2A2RUG3 117 aa9.93□□□□□ -0.82
SKA3-204ENST00000462482 RPL35P42766 123 aaKnown RBP9.93□□□□□ -0.82
SKA3-204ENST00000462482 CACNG7P62955 275 aa9.93□□□□□ -0.82
SKA3-204ENST00000462482 REG3AQ06141 175 aa9.93□□□□□ -0.82
SKA3-204ENST00000462482 FER1L6-AS1Q8NA97 138 aa9.93□□□□□ -0.82
SKA3-204ENST00000462482 MANBALQ9NQG1 85 aa9.93□□□□□ -0.82
SKA3-204ENST00000462482 KIF25-AS1Q9Y6Z4 181 aa9.93□□□□□ -0.82
SKA3-204ENST00000462482 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.92□□□□□ -0.82
SKA3-204ENST00000462482 TRAV8-4A0A0B4J246 113 aa9.92□□□□□ -0.82
SKA3-204ENST00000462482 SMLR1H3BR10 107 aa9.92□□□□□ -0.82
SKA3-204ENST00000462482 TEX46H3BTG2 121 aa9.92□□□□□ -0.82
SKA3-204ENST00000462482 P01737 135 aa9.92□□□□□ -0.82
SKA3-204ENST00000462482 OR2D3Q8NGH3 330 aa9.92□□□□□ -0.82
SKA3-204ENST00000462482 TMEM243Q9BU79 118 aa9.92□□□□□ -0.82
SKA3-204ENST00000462482 IGLV10-54A0A075B6I4 117 aa9.91□□□□□ -0.82
SKA3-204ENST00000462482 hDV102S1A0JD36 115 aa9.91□□□□□ -0.82
SKA3-204ENST00000462482 M0QY20 66 aa9.91□□□□□ -0.82
SKA3-204ENST00000462482 UBE2L6O14933 153 aa9.91□□□□□ -0.82
SKA3-204ENST00000462482 BCL2L11O43521 198 aa9.91□□□□□ -0.82
SKA3-204ENST00000462482 GNG13Q9P2W3 67 aa9.91□□□□□ -0.82
SKA3-204ENST00000462482 HMSDA8MTL9 139 aa9.9□□□□□ -0.82
SKA3-204ENST00000462482 TRGC1P0CF51 173 aa9.9□□□□□ -0.82
SKA3-204ENST00000462482 GZMBP10144 247 aa9.9□□□□□ -0.82
SKA3-204ENST00000462482 NKX2-5P52952 324 aaPredicted RBP9.9□□□□□ -0.82
SKA3-204ENST00000462482 WDR73Q6P4I2 378 aa9.9□□□□□ -0.82
SKA3-204ENST00000462482 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.9□□□□□ -0.82
SKA3-204ENST00000462482 IGHV3-64A0A075B6Q5 118 aa9.89□□□□□ -0.83
SKA3-204ENST00000462482 F2Z2F3 143 aa9.89□□□□□ -0.83
SKA3-204ENST00000462482 CNBPP62633 177 aaKnown RBP9.89□□□□□ -0.83
SKA3-204ENST00000462482 CENPWQ5EE01 88 aa9.89□□□□□ -0.83
SKA3-204ENST00000462482 SUMO4Q6EEV6 95 aa9.89□□□□□ -0.83
SKA3-204ENST00000462482 RASL11AQ6T310 242 aa9.89□□□□□ -0.83
SKA3-204ENST00000462482 SDIM1Q6ZPB5 146 aa9.89□□□□□ -0.83
SKA3-204ENST00000462482 BIN3Q9NQY0 253 aa9.89□□□□□ -0.83
SKA3-204ENST00000462482 A0A1B0GUV1 79 aa9.88□□□□□ -0.83
SKA3-204ENST00000462482 IGLC6P0CF74 106 aa9.88□□□□□ -0.83
SKA3-204ENST00000462482 GNG4P50150 75 aa9.88□□□□□ -0.83
SKA3-204ENST00000462482 SULT1A2P50226 295 aa9.88□□□□□ -0.83
SKA3-204ENST00000462482 KRTAP26-1Q6PEX3 210 aa9.88□□□□□ -0.83
SKA3-204ENST00000462482 C11orf52Q96A22 123 aa9.88□□□□□ -0.83
SKA3-204ENST00000462482 SMIM12Q96EX1 92 aa9.88□□□□□ -0.83
SKA3-204ENST00000462482 IFNA1P01562 189 aa9.87□□□□□ -0.83
SKA3-204ENST00000462482 COTL1Q14019 142 aa9.87□□□□□ -0.83
SKA3-204ENST00000462482 EIF5AL1Q6IS14 154 aaKnown RBP9.87□□□□□ -0.83
SKA3-204ENST00000462482 C20orf203Q8NBC4 194 aa9.87□□□□□ -0.83
SKA3-204ENST00000462482 RNF185Q96GF1 192 aa9.87□□□□□ -0.83
SKA3-204ENST00000462482 DPH3P1Q9H4G8 78 aa9.87□□□□□ -0.83
SKA3-204ENST00000462482 NIT2Q9NQR4 276 aa9.87□□□□□ -0.83
SKA3-204ENST00000462482 AMTP48728 403 aa9.86□□□□□ -0.83
SKA3-204ENST00000462482 RAB5CP51148 216 aa9.86□□□□□ -0.83
SKA3-204ENST00000462482 CCL20P78556 96 aa9.86□□□□□ -0.83
SKA3-204ENST00000462482 CFAP161Q6P656 301 aa9.86□□□□□ -0.83
SKA3-204ENST00000462482 PGLYRP4Q96LB8 373 aa9.86□□□□□ -0.83
SKA3-204ENST00000462482 PDE6DO43924 150 aa9.85□□□□□ -0.83
SKA3-204ENST00000462482 HNRNPA3P51991 378 aaKnown RBP9.85□□□□□ -0.83
SKA3-204ENST00000462482 Q6ZRU5 148 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms