RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 KLKP1Q107X0 134 aa1.42□□□□□ -2.18
SPTLC1-203ENST00000461132 C5orf56Q8N8D9 126 aa1.42□□□□□ -2.18
SPTLC1-203ENST00000461132 COX7B2Q8TF08 81 aa1.42□□□□□ -2.18
SPTLC1-203ENST00000461132 CCL19Q99731 98 aa1.42□□□□□ -2.18
SPTLC1-203ENST00000461132 SNRNP200O75643 2136 aaKnown RBP1.42□□□□□ -2.18
SPTLC1-203ENST00000461132 RBBP6Q7Z6E9 1792 aaKnown RBP1.42□□□□□ -2.18
SPTLC1-203ENST00000461132 BLMP54132 1417 aaPredicted RBP1.41□□□□□ -2.18
SPTLC1-203ENST00000461132 NBDYA0A0U1RRE5 68 aa1.41□□□□□ -2.18
SPTLC1-203ENST00000461132 LINC00032P0C843 101 aa1.41□□□□□ -2.18
SPTLC1-203ENST00000461132 UBE2D1P51668 147 aa1.41□□□□□ -2.18
SPTLC1-203ENST00000461132 C10orf128Q5T292 105 aa1.41□□□□□ -2.18
SPTLC1-203ENST00000461132 LINC00208Q96KT6 92 aa1.41□□□□□ -2.18
SPTLC1-203ENST00000461132 DPH3P1Q9H4G8 78 aa1.41□□□□□ -2.18
SPTLC1-203ENST00000461132 SCP2D1Q9UJQ7 156 aa1.41□□□□□ -2.18
SPTLC1-203ENST00000461132 A0A1W2PPM0 123 aa1.4□□□□□ -2.19
SPTLC1-203ENST00000461132 LYNX1P0DP58 116 aa1.4□□□□□ -2.19
SPTLC1-203ENST00000461132 CCL3L1P16619 93 aa1.4□□□□□ -2.19
SPTLC1-203ENST00000461132 KRTDAPP60985 99 aa1.4□□□□□ -2.19
SPTLC1-203ENST00000461132 COL5A1-AS1Q5SY13 56 aa1.4□□□□□ -2.19
SPTLC1-203ENST00000461132 TMEM14BQ9NUH8 114 aa1.4□□□□□ -2.19
SPTLC1-203ENST00000461132 LINC00312Q9Y6C7 94 aa1.4□□□□□ -2.19
SPTLC1-203ENST00000461132 V9GYV3 84 aa1.4□□□□□ -2.19
SPTLC1-203ENST00000461132 LAMB1P07942 1786 aa1.39□□□□□ -2.19
SPTLC1-203ENST00000461132 TET1Q8NFU7 2136 aa1.39□□□□□ -2.19
SPTLC1-203ENST00000461132 SNCAP37840 140 aa1.39□□□□□ -2.19
SPTLC1-203ENST00000461132 EFNA4P52798 201 aa1.39□□□□□ -2.19
SPTLC1-203ENST00000461132 FXYD6P3P58550 94 aa1.39□□□□□ -2.19
SPTLC1-203ENST00000461132 GNG11P61952 73 aa1.39□□□□□ -2.19
SPTLC1-203ENST00000461132 SPINK13Q1W4C9 94 aa1.39□□□□□ -2.19
SPTLC1-203ENST00000461132 NCMAPQ5T1S8 102 aa1.39□□□□□ -2.19
SPTLC1-203ENST00000461132 C10orf99Q6UWK7 81 aa1.39□□□□□ -2.19
SPTLC1-203ENST00000461132 Q6ZSA8 131 aa1.39□□□□□ -2.19
SPTLC1-203ENST00000461132 PPIP5K1Q6PFW1 1433 aa1.39□□□□□ -2.19
SPTLC1-203ENST00000461132 DLEC1Q9Y238 1755 aa1.39□□□□□ -2.19
SPTLC1-203ENST00000461132 CTTNBP2Q8WZ74 1663 aa1.39□□□□□ -2.19
SPTLC1-203ENST00000461132 QRICH2Q9H0J4 1663 aa1.39□□□□□ -2.19
SPTLC1-203ENST00000461132 BCORL1Q5H9F3 1711 aa1.38□□□□□ -2.19
SPTLC1-203ENST00000461132 PEAK1Q9H792 1746 aa1.38□□□□□ -2.19
SPTLC1-203ENST00000461132 KIAA0100Q14667 2235 aaKnown RBP1.38□□□□□ -2.19
SPTLC1-203ENST00000461132 NAP1L6A6NFF2 107 aa1.38□□□□□ -2.19
SPTLC1-203ENST00000461132 ARL14EPLP0DKL9 152 aa1.38□□□□□ -2.19
SPTLC1-203ENST00000461132 EDDM3BP56851 147 aa1.38□□□□□ -2.19
SPTLC1-203ENST00000461132 ELOF1P60002 83 aaKnown RBP1.38□□□□□ -2.19
SPTLC1-203ENST00000461132 DPY30Q9C005 99 aa1.38□□□□□ -2.19
SPTLC1-203ENST00000461132 ZFYVE16Q7Z3T8 1539 aa1.38□□□□□ -2.19
SPTLC1-203ENST00000461132 ZNF142P52746 1687 aaPredicted RBP1.38□□□□□ -2.19
SPTLC1-203ENST00000461132 OTOGLQ3ZCN5 2332 aa1.38□□□□□ -2.19
SPTLC1-203ENST00000461132 MED13Q9UHV7 2174 aa1.37□□□□□ -2.19
SPTLC1-203ENST00000461132 Q9H521 79 aa1.37□□□□□ -2.19
SPTLC1-203ENST00000461132 R4GMQ9 66 aa1.37□□□□□ -2.19
SPTLC1-203ENST00000461132 C10orf71Q711Q0 1435 aa1.37□□□□□ -2.19
SPTLC1-203ENST00000461132 SPTBP11277 2137 aa1.37□□□□□ -2.19
SPTLC1-203ENST00000461132 MED12Q93074 2177 aa1.37□□□□□ -2.19
SPTLC1-203ENST00000461132 E9PCH4 1651 aa1.36□□□□□ -2.19
SPTLC1-203ENST00000461132 RREB1Q92766 1687 aa1.36□□□□□ -2.19
SPTLC1-203ENST00000461132 LOC285095A0A1B0GVY8 99 aa1.36□□□□□ -2.19
SPTLC1-203ENST00000461132 CACNA1BQ00975 2339 aa1.36□□□□□ -2.19
SPTLC1-203ENST00000461132 CASKIN1Q8WXD9 1431 aa1.36□□□□□ -2.19
SPTLC1-203ENST00000461132 MGST2Q99735 147 aa1.36□□□□□ -2.19
SPTLC1-203ENST00000461132 UQCR10Q9UDW1 63 aa1.36□□□□□ -2.19
SPTLC1-203ENST00000461132 NWD2Q9ULI1 1742 aa1.36□□□□□ -2.19
SPTLC1-203ENST00000461132 ASCC3Q8N3C0 2202 aaKnown RBP1.36□□□□□ -2.19
SPTLC1-203ENST00000461132 PHRF1Q9P1Y6 1649 aaKnown RBP1.36□□□□□ -2.19
SPTLC1-203ENST00000461132 TECTAO75443 2155 aa1.35□□□□□ -2.19
SPTLC1-203ENST00000461132 PRRC2BQ5JSZ5 2229 aaKnown RBP1.35□□□□□ -2.19
SPTLC1-203ENST00000461132 DLG5Q8TDM6 1919 aa1.35□□□□□ -2.19
SPTLC1-203ENST00000461132 MUC22E2RYF6 1773 aaPredicted RBP1.35□□□□□ -2.19
SPTLC1-203ENST00000461132 TRBV7-3A0A075B6L6 115 aa1.35□□□□□ -2.19
SPTLC1-203ENST00000461132 PPP1R17O96001 155 aa1.35□□□□□ -2.19
SPTLC1-203ENST00000461132 UBA52P62987 128 aaKnown RBP1.35□□□□□ -2.19
SPTLC1-203ENST00000461132 LENEPQ9Y5L5 61 aa1.35□□□□□ -2.19
SPTLC1-203ENST00000461132 AFDNP55196 1824 aaKnown RBP1.35□□□□□ -2.19
SPTLC1-203ENST00000461132 SCAPERQ9BY12 1400 aa1.34□□□□□ -2.19
SPTLC1-203ENST00000461132 NSD3Q9BZ95 1437 aa1.34□□□□□ -2.19
SPTLC1-203ENST00000461132 F2Z2F3 143 aa1.34□□□□□ -2.19
SPTLC1-203ENST00000461132 GNGT2O14610 69 aa1.34□□□□□ -2.19
SPTLC1-203ENST00000461132 GNG2P59768 71 aa1.34□□□□□ -2.19
SPTLC1-203ENST00000461132 DYNLRB1Q9NP97 96 aa1.34□□□□□ -2.19
SPTLC1-203ENST00000461132 ARAP2Q8WZ64 1704 aa1.34□□□□□ -2.2
SPTLC1-203ENST00000461132 ARHGAP5Q13017 1502 aa1.34□□□□□ -2.2
SPTLC1-203ENST00000461132 SORL1Q92673 2214 aa1.34□□□□□ -2.2
SPTLC1-203ENST00000461132 NCOA6Q14686 2063 aaPredicted RBP1.33□□□□□ -2.2
SPTLC1-203ENST00000461132 ESPL1Q14674 2120 aa1.33□□□□□ -2.2
SPTLC1-203ENST00000461132 NRXN2Q9P2S2 1712 aa1.33□□□□□ -2.2
SPTLC1-203ENST00000461132 MPC2O95563 127 aa1.33□□□□□ -2.2
SPTLC1-203ENST00000461132 SPAG11BQ08648 103 aa1.33□□□□□ -2.2
SPTLC1-203ENST00000461132 SPAG11AQ6PDA7 123 aa1.33□□□□□ -2.2
SPTLC1-203ENST00000461132 BAGE3Q86Y29 109 aa1.33□□□□□ -2.2
SPTLC1-203ENST00000461132 LRRC37A3O60309 1634 aa1.33□□□□□ -2.2
SPTLC1-203ENST00000461132 ZNF609O15014 1411 aa1.32□□□□□ -2.2
SPTLC1-203ENST00000461132 TNS1Q9HBL0 1735 aaKnown RBP1.32□□□□□ -2.2
SPTLC1-203ENST00000461132 PARP14Q460N5 1801 aa1.32□□□□□ -2.2
SPTLC1-203ENST00000461132 CRYM-AS1A6NIL9 109 aa1.32□□□□□ -2.2
SPTLC1-203ENST00000461132 PRB1P04280 392 aa1.32□□□□□ -2.2
SPTLC1-203ENST00000461132 TMEM170BQ5T4T1 132 aa1.32□□□□□ -2.2
SPTLC1-203ENST00000461132 VAMP8Q9BV40 100 aa1.32□□□□□ -2.2
SPTLC1-203ENST00000461132 SNHG12Q9BXW3 62 aa1.32□□□□□ -2.2
SPTLC1-203ENST00000461132 MANBALQ9NQG1 85 aa1.32□□□□□ -2.2
SPTLC1-203ENST00000461132 V9GYS6 101 aa1.32□□□□□ -2.2
SPTLC1-203ENST00000461132 ABCA4P78363 2273 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms