RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 A0A087WWL8 130 aa11.28□□□□□ -0.6
TMEM50B-205ENST00000459909 TWIST1Q15672 202 aa11.28□□□□□ -0.6
TMEM50B-205ENST00000459909 NDUFA5Q16718 116 aa11.28□□□□□ -0.6
TMEM50B-205ENST00000459909 C10orf91Q5T1B1 145 aa11.28□□□□□ -0.6
TMEM50B-205ENST00000459909 ANAPC16Q96DE5 110 aa11.28□□□□□ -0.6
TMEM50B-205ENST00000459909 AP1S3Q96PC3 154 aa11.28□□□□□ -0.6
TMEM50B-205ENST00000459909 TMEM70Q9BUB7 260 aa11.28□□□□□ -0.6
TMEM50B-205ENST00000459909 SAMD10Q9BYL1 202 aa11.28□□□□□ -0.6
TMEM50B-205ENST00000459909 CARHSP1Q9Y2V2 147 aaKnown RBP11.28□□□□□ -0.6
TMEM50B-205ENST00000459909 FAM231BA6NCW3 169 aa11.27□□□□□ -0.61
TMEM50B-205ENST00000459909 RHODO00212 210 aa11.27□□□□□ -0.61
TMEM50B-205ENST00000459909 CIDEAO60543 219 aa11.27□□□□□ -0.61
TMEM50B-205ENST00000459909 NTF3P20783 257 aa11.27□□□□□ -0.61
TMEM50B-205ENST00000459909 FHL2Q14192 279 aa11.27□□□□□ -0.61
TMEM50B-205ENST00000459909 MSRB1Q9NZV6 116 aa11.27□□□□□ -0.61
TMEM50B-205ENST00000459909 PRO0255Q9UI72 69 aa11.27□□□□□ -0.61
TMEM50B-205ENST00000459909 HHLA3Q9XRX5 114 aa11.27□□□□□ -0.61
TMEM50B-205ENST00000459909 TNFRSF18Q9Y5U5 241 aa11.27□□□□□ -0.61
TMEM50B-205ENST00000459909 A0A096LPF7 62 aa11.26□□□□□ -0.61
TMEM50B-205ENST00000459909 PAX4O43316 350 aa11.26□□□□□ -0.61
TMEM50B-205ENST00000459909 APOC3P02656 99 aa11.26□□□□□ -0.61
TMEM50B-205ENST00000459909 TRGC1P0CF51 173 aa11.26□□□□□ -0.61
TMEM50B-205ENST00000459909 SMIM17P0DL12 118 aa11.26□□□□□ -0.61
TMEM50B-205ENST00000459909 FOXA3P55318 350 aaPredicted RBP11.26□□□□□ -0.61
TMEM50B-205ENST00000459909 SLAQ13239 276 aa11.26□□□□□ -0.61
TMEM50B-205ENST00000459909 WDR73Q6P4I2 378 aa11.26□□□□□ -0.61
TMEM50B-205ENST00000459909 C14orf178Q8N769 122 aaPredicted RBP11.26□□□□□ -0.61
TMEM50B-205ENST00000459909 NAT8BQ9UHF3 227 aa11.26□□□□□ -0.61
TMEM50B-205ENST00000459909 A0A1B0GUT8 65 aa11.25□□□□□ -0.61
TMEM50B-205ENST00000459909 SMIM27A0A1W2PRY6 76 aa11.25□□□□□ -0.61
TMEM50B-205ENST00000459909 ZFP2Q6ZN57 461 aa11.25□□□□□ -0.61
TMEM50B-205ENST00000459909 NUP35Q8NFH5 326 aa11.25□□□□□ -0.61
TMEM50B-205ENST00000459909 CNFNQ9BYD5 112 aa11.25□□□□□ -0.61
TMEM50B-205ENST00000459909 CRYGDP07320 174 aa11.24□□□□□ -0.61
TMEM50B-205ENST00000459909 GATA1P15976 413 aaPredicted RBP11.24□□□□□ -0.61
TMEM50B-205ENST00000459909 CRYBA4P53673 196 aa11.24□□□□□ -0.61
TMEM50B-205ENST00000459909 ZNF56Q15929 161 aa11.24□□□□□ -0.61
TMEM50B-205ENST00000459909 CLRN3Q8NCR9 226 aa11.24□□□□□ -0.61
TMEM50B-205ENST00000459909 PLA2G2DQ9UNK4 145 aa11.24□□□□□ -0.61
TMEM50B-205ENST00000459909 PLA2G1BP04054 148 aaKnown RBP11.23□□□□□ -0.61
TMEM50B-205ENST00000459909 MGPP08493 103 aa11.23□□□□□ -0.61
TMEM50B-205ENST00000459909 RIGQ13278 110 aa11.23□□□□□ -0.61
TMEM50B-205ENST00000459909 UFSP1Q6NVU6 142 aa11.23□□□□□ -0.61
TMEM50B-205ENST00000459909 SMIM15Q7Z3B0 74 aa11.23□□□□□ -0.61
TMEM50B-205ENST00000459909 DEFB104AQ8WTQ1 72 aa11.23□□□□□ -0.61
TMEM50B-205ENST00000459909 VSIG2Q96IQ7 327 aa11.23□□□□□ -0.61
TMEM50B-205ENST00000459909 C7orf77A4D0Y5 90 aa11.22□□□□□ -0.61
TMEM50B-205ENST00000459909 F5H697 171 aa11.22□□□□□ -0.61
TMEM50B-205ENST00000459909 EVI2AP22794 236 aa11.22□□□□□ -0.61
TMEM50B-205ENST00000459909 RHEBQ15382 184 aa11.22□□□□□ -0.61
TMEM50B-205ENST00000459909 SVBPQ8N300 66 aa11.22□□□□□ -0.61
TMEM50B-205ENST00000459909 SLC25A29Q8N8R3 303 aa11.22□□□□□ -0.61
TMEM50B-205ENST00000459909 PRADC1Q9BSG0 188 aa11.22□□□□□ -0.61
TMEM50B-205ENST00000459909 CTDSP1Q9GZU7 261 aa11.22□□□□□ -0.61
TMEM50B-205ENST00000459909 TRAV9-2A0A087WT02 112 aa11.21□□□□□ -0.61
TMEM50B-205ENST00000459909 TRBV6-4A0A1B0GX49 114 aa11.21□□□□□ -0.61
TMEM50B-205ENST00000459909 SNAPINO95295 136 aa11.21□□□□□ -0.61
TMEM50B-205ENST00000459909 RHOHQ15669 191 aa11.21□□□□□ -0.61
TMEM50B-205ENST00000459909 DPH3P1Q9H4G8 78 aa11.21□□□□□ -0.61
TMEM50B-205ENST00000459909 RPS10P5Q9NQ39 176 aa11.21□□□□□ -0.61
TMEM50B-205ENST00000459909 IGLV5-52A0A0A0MRZ9 124 aa11.2□□□□□ -0.62
TMEM50B-205ENST00000459909 K7EQD1 137 aa11.2□□□□□ -0.62
TMEM50B-205ENST00000459909 GYPEP15421 78 aa11.2□□□□□ -0.62
TMEM50B-205ENST00000459909 RAB4BP61018 213 aa11.2□□□□□ -0.62
TMEM50B-205ENST00000459909 MRPL54Q6P161 138 aaKnown RBP11.2□□□□□ -0.62
TMEM50B-205ENST00000459909 ICOSQ9Y6W8 199 aa11.2□□□□□ -0.62
TMEM50B-205ENST00000459909 KIF25-AS1Q9Y6Z4 181 aa11.2□□□□□ -0.62
TMEM50B-205ENST00000459909 LOC100131303A0A0U1RQF7 123 aa11.19□□□□□ -0.62
TMEM50B-205ENST00000459909 A0A087WWC5 75 aa11.18□□□□□ -0.62
TMEM50B-205ENST00000459909 CAMPP49913 170 aa11.18□□□□□ -0.62
TMEM50B-205ENST00000459909 MRPL23Q16540 153 aaKnown RBP11.18□□□□□ -0.62
TMEM50B-205ENST00000459909 KCNIP4Q6PIL6 250 aa11.18□□□□□ -0.62
TMEM50B-205ENST00000459909 NTN5Q8WTR8 489 aaPredicted RBP11.18□□□□□ -0.62
TMEM50B-205ENST00000459909 A0A1B0GW15 77 aa11.17□□□□□ -0.62
TMEM50B-205ENST00000459909 K7EP13 123 aa11.17□□□□□ -0.62
TMEM50B-205ENST00000459909 S100PP25815 95 aa11.17□□□□□ -0.62
TMEM50B-205ENST00000459909 SRIP30626 198 aa11.17□□□□□ -0.62
TMEM50B-205ENST00000459909 IMMP2LQ96T52 175 aa11.17□□□□□ -0.62
TMEM50B-205ENST00000459909 S100A8P05109 93 aa11.16□□□□□ -0.62
TMEM50B-205ENST00000459909 HBBP68871 147 aa11.16□□□□□ -0.62
TMEM50B-205ENST00000459909 SUMO4Q6EEV6 95 aa11.16□□□□□ -0.62
TMEM50B-205ENST00000459909 BTF3L4Q96K17 158 aa11.16□□□□□ -0.62
TMEM50B-205ENST00000459909 TMEM191AQ9H0A3 160 aa11.16□□□□□ -0.62
TMEM50B-205ENST00000459909 TMEM242Q9NWH2 141 aa11.16□□□□□ -0.62
TMEM50B-205ENST00000459909 GAGE12JA6NER3 117 aa11.15□□□□□ -0.62
TMEM50B-205ENST00000459909 H7C1H1 209 aa11.15□□□□□ -0.62
TMEM50B-205ENST00000459909 GAGE1Q13065 139 aa11.15□□□□□ -0.62
TMEM50B-205ENST00000459909 GAGE4Q13068 117 aa11.15□□□□□ -0.62
TMEM50B-205ENST00000459909 GAGE5Q13069 117 aa11.15□□□□□ -0.62
TMEM50B-205ENST00000459909 GAGE13Q4V321 117 aa11.15□□□□□ -0.62
TMEM50B-205ENST00000459909 ATP5L2Q7Z4Y8 100 aa11.15□□□□□ -0.62
TMEM50B-205ENST00000459909 FAM30AQ9NZY2 134 aa11.15□□□□□ -0.62
TMEM50B-205ENST00000459909 URGCP-MRPS24S4R325 110 aa11.15□□□□□ -0.62
TMEM50B-205ENST00000459909 LRP1Q07954 4544 aaKnown RBP11.15□□□□□ -0.62
TMEM50B-205ENST00000459909 TRBV10-1A0A0K0K1A3 114 aa11.14□□□□□ -0.63
TMEM50B-205ENST00000459909 RPL36AP83881 106 aaKnown RBP11.14□□□□□ -0.63
TMEM50B-205ENST00000459909 LYPD5Q6UWN5 251 aa11.14□□□□□ -0.63
TMEM50B-205ENST00000459909 NEGR1Q7Z3B1 354 aa11.14□□□□□ -0.63
TMEM50B-205ENST00000459909 AMN1Q8IY45 258 aa11.14□□□□□ -0.63
TMEM50B-205ENST00000459909 LINC00528Q8N1L1 170 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms