RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 HRCT1Q6UXD1 115 aa-0.54□□□□□ -2.5
SCARNA18-201ENST00000459004 NAT14Q8WUY8 206 aa-0.54□□□□□ -2.5
SCARNA18-201ENST00000459004 CBLN4Q9NTU7 201 aa-0.54□□□□□ -2.5
SCARNA18-201ENST00000459004 LINC00846Q9NV44 126 aa-0.54□□□□□ -2.5
SCARNA18-201ENST00000459004 BET1LQ9NYM9 111 aa-0.54□□□□□ -2.5
SCARNA18-201ENST00000459004 MED31Q9Y3C7 131 aa-0.54□□□□□ -2.5
SCARNA18-201ENST00000459004 A2MP01023 1474 aa-0.54□□□□□ -2.5
SCARNA18-201ENST00000459004 CEP290O15078 2479 aa-0.55□□□□□ -2.5
SCARNA18-201ENST00000459004 CRYBA4P53673 196 aa-0.55□□□□□ -2.5
SCARNA18-201ENST00000459004 EMX2Q04743 252 aa-0.55□□□□□ -2.5
SCARNA18-201ENST00000459004 BRCA2P51587 3418 aa-0.55□□□□□ -2.5
SCARNA18-201ENST00000459004 PI4KAP42356 2102 aa-0.55□□□□□ -2.5
SCARNA18-201ENST00000459004 UTRNP46939 3433 aa-0.56□□□□□ -2.5
SCARNA18-201ENST00000459004 VIRMAQ69YN4 1812 aaKnown RBP-0.56□□□□□ -2.5
SCARNA18-201ENST00000459004 PDE4DIPQ5VU43 2346 aa-0.56□□□□□ -2.5
SCARNA18-201ENST00000459004 PNMA8CA0A1B0GUJ8 204 aa-0.56□□□□□ -2.5
SCARNA18-201ENST00000459004 TMEM238C9JI98 176 aa-0.56□□□□□ -2.5
SCARNA18-201ENST00000459004 MT1GP13640 62 aa-0.56□□□□□ -2.5
SCARNA18-201ENST00000459004 KRTAP8-1Q8IUC2 63 aa-0.56□□□□□ -2.5
SCARNA18-201ENST00000459004 GID8Q9NWU2 228 aa-0.56□□□□□ -2.5
SCARNA18-201ENST00000459004 GOLGB1Q14789 3259 aaKnown RBP-0.56□□□□□ -2.5
SCARNA18-201ENST00000459004 ASXL3Q9C0F0 2248 aa-0.56□□□□□ -2.5
SCARNA18-201ENST00000459004 SPG11Q96JI7 2443 aa-0.56□□□□□ -2.5
SCARNA18-201ENST00000459004 CENPFP49454 3210 aa-0.57□□□□□ -2.5
SCARNA18-201ENST00000459004 GVQW2A0A096LPI5 108 aaPredicted RBP-0.57□□□□□ -2.5
SCARNA18-201ENST00000459004 A0A1W2PRE2 83 aa-0.57□□□□□ -2.5
SCARNA18-201ENST00000459004 E7EQ34 232 aa-0.57□□□□□ -2.5
SCARNA18-201ENST00000459004 ZNF670-ZNF695F2Z2N8 137 aa-0.57□□□□□ -2.5
SCARNA18-201ENST00000459004 NMBP08949 121 aa-0.57□□□□□ -2.5
SCARNA18-201ENST00000459004 POLR2HP52434 150 aaKnown RBP-0.57□□□□□ -2.5
SCARNA18-201ENST00000459004 ELOF1P60002 83 aaKnown RBP-0.57□□□□□ -2.5
SCARNA18-201ENST00000459004 TRIQKQ629K1 86 aa-0.57□□□□□ -2.5
SCARNA18-201ENST00000459004 BRK1Q8WUW1 75 aa-0.57□□□□□ -2.5
SCARNA18-201ENST00000459004 PPDPFLQ8WWR9 84 aa-0.57□□□□□ -2.5
SCARNA18-201ENST00000459004 PTPRQQ9UMZ3 2332 aa-0.57□□□□□ -2.5
SCARNA18-201ENST00000459004 ABCA1O95477 2261 aa-0.57□□□□□ -2.5
SCARNA18-201ENST00000459004 NINQ8N4C6 2090 aa-0.58□□□□□ -2.5
SCARNA18-201ENST00000459004 ZNF142P52746 1687 aaPredicted RBP-0.58□□□□□ -2.5
SCARNA18-201ENST00000459004 M0QZK8 103 aa-0.58□□□□□ -2.5
SCARNA18-201ENST00000459004 UQCRQO14949 82 aa-0.58□□□□□ -2.5
SCARNA18-201ENST00000459004 MT1EP04732 61 aa-0.58□□□□□ -2.5
SCARNA18-201ENST00000459004 RPL22P35268 128 aaKnown RBP-0.58□□□□□ -2.5
SCARNA18-201ENST00000459004 PCBD1P61457 104 aa-0.58□□□□□ -2.5
SCARNA18-201ENST00000459004 KLK9Q2XQG4 91 aa-0.58□□□□□ -2.5
SCARNA18-201ENST00000459004 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.58□□□□□ -2.5
SCARNA18-201ENST00000459004 SMIM11BQ8TCY0 68 aa-0.58□□□□□ -2.5
SCARNA18-201ENST00000459004 THEM6Q8WUY1 208 aa-0.58□□□□□ -2.5
SCARNA18-201ENST00000459004 VPS25Q9BRG1 176 aa-0.58□□□□□ -2.5
SCARNA18-201ENST00000459004 URB1O60287 2271 aaKnown RBP-0.58□□□□□ -2.5
SCARNA18-201ENST00000459004 LAMC1P11047 1609 aa-0.59□□□□□ -2.5
SCARNA18-201ENST00000459004 XIRP2A4UGR9 3374 aa-0.59□□□□□ -2.5
SCARNA18-201ENST00000459004 TRAV17A0A0B4J275 112 aa-0.59□□□□□ -2.5
SCARNA18-201ENST00000459004 CXorf51AA0A1B0GTR3 108 aa-0.59□□□□□ -2.5
SCARNA18-201ENST00000459004 SPCS2Q15005 226 aa-0.59□□□□□ -2.5
SCARNA18-201ENST00000459004 ATPIF1Q9UII2 106 aa-0.59□□□□□ -2.5
SCARNA18-201ENST00000459004 TRAPPC2LQ9UL33 140 aa-0.59□□□□□ -2.5
SCARNA18-201ENST00000459004 ASPMQ8IZT6 3477 aa-0.59□□□□□ -2.5
SCARNA18-201ENST00000459004 SSC5DA1L4H1 1573 aa-0.59□□□□□ -2.5
SCARNA18-201ENST00000459004 PLXNA2O75051 1894 aa-0.59□□□□□ -2.5
SCARNA18-201ENST00000459004 SMR3BP02814 79 aaPredicted RBP-0.6□□□□□ -2.51
SCARNA18-201ENST00000459004 APODP05090 189 aa-0.6□□□□□ -2.51
SCARNA18-201ENST00000459004 DEFA5Q01523 94 aa-0.6□□□□□ -2.51
SCARNA18-201ENST00000459004 MT1LQ93083 61 aa-0.6□□□□□ -2.51
SCARNA18-201ENST00000459004 SPTAN1Q13813 2472 aaKnown RBP-0.6□□□□□ -2.51
SCARNA18-201ENST00000459004 CSPG4Q6UVK1 2322 aa-0.6□□□□□ -2.51
SCARNA18-201ENST00000459004 NBASA2RRP1 2371 aa-0.61□□□□□ -2.51
SCARNA18-201ENST00000459004 PPRC1Q5VV67 1664 aaKnown RBP-0.61□□□□□ -2.51
SCARNA18-201ENST00000459004 RBAKDNA6NC62 111 aa-0.61□□□□□ -2.51
SCARNA18-201ENST00000459004 E5RI56 91 aa-0.61□□□□□ -2.51
SCARNA18-201ENST00000459004 PRM1P04553 51 aa-0.61□□□□□ -2.51
SCARNA18-201ENST00000459004 SLC25A5P05141 298 aaKnown RBP-0.61□□□□□ -2.51
SCARNA18-201ENST00000459004 AKR1D1P51857 326 aa-0.61□□□□□ -2.51
SCARNA18-201ENST00000459004 PLGLB1Q02325 96 aa-0.61□□□□□ -2.51
SCARNA18-201ENST00000459004 PCBD2Q9H0N5 130 aa-0.61□□□□□ -2.51
SCARNA18-201ENST00000459004 TAS2R8Q9NYW2 309 aa-0.61□□□□□ -2.51
SCARNA18-201ENST00000459004 METTL1Q9UBP6 276 aaKnown RBP-0.61□□□□□ -2.51
SCARNA18-201ENST00000459004 NDUFAF1Q9Y375 327 aa-0.61□□□□□ -2.51
SCARNA18-201ENST00000459004 MED23Q9ULK4 1368 aa-0.61□□□□□ -2.51
SCARNA18-201ENST00000459004 MED13LQ71F56 2210 aa-0.61□□□□□ -2.51
SCARNA18-201ENST00000459004 KDM5CP41229 1560 aa-0.62□□□□□ -2.51
SCARNA18-201ENST00000459004 SPTBN1Q01082 2364 aaKnown RBP-0.62□□□□□ -2.51
SCARNA18-201ENST00000459004 ARHGAP31Q2M1Z3 1444 aa-0.62□□□□□ -2.51
SCARNA18-201ENST00000459004 SMG6Q86US8 1419 aaKnown RBP-0.62□□□□□ -2.51
SCARNA18-201ENST00000459004 TRAV2A0A0B4J234 112 aa-0.62□□□□□ -2.51
SCARNA18-201ENST00000459004 TCRBV3S1A0A5B6 114 aa-0.62□□□□□ -2.51
SCARNA18-201ENST00000459004 COX4I1P13073 169 aa-0.62□□□□□ -2.51
SCARNA18-201ENST00000459004 HIST1H1BP16401 226 aaKnown RBP-0.62□□□□□ -2.51
SCARNA18-201ENST00000459004 RPL7P18124 248 aaKnown RBP-0.62□□□□□ -2.51
SCARNA18-201ENST00000459004 KRTAP19-2Q3LHN2 52 aa-0.62□□□□□ -2.51
SCARNA18-201ENST00000459004 CCDC115Q96NT0 180 aa-0.62□□□□□ -2.51
SCARNA18-201ENST00000459004 TMEM242Q9NWH2 141 aa-0.62□□□□□ -2.51
SCARNA18-201ENST00000459004 CADP27708 2225 aa-0.62□□□□□ -2.51
SCARNA18-201ENST00000459004 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.63□□□□□ -2.51
SCARNA18-201ENST00000459004 CCDC171Q6TFL3 1326 aa-0.63□□□□□ -2.51
SCARNA18-201ENST00000459004 ASXL1Q8IXJ9 1541 aa-0.63□□□□□ -2.51
SCARNA18-201ENST00000459004 HELZP42694 1942 aaKnown RBP-0.63□□□□□ -2.51
SCARNA18-201ENST00000459004 TFF1P04155 84 aa-0.63□□□□□ -2.51
SCARNA18-201ENST00000459004 ASIPP42127 132 aa-0.63□□□□□ -2.51
SCARNA18-201ENST00000459004 PSPHP78330 225 aa-0.63□□□□□ -2.51
SCARNA18-201ENST00000459004 OR2T2Q6IF00 324 aa-0.63□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms