RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 CYTL1Q9NRR1 136 aa13.92□□□□□ -0.18
CPNE1-220ENST00000458038 PRR34Q9NV39 138 aa13.92□□□□□ -0.18
CPNE1-220ENST00000458038 PRSS1P07477 247 aa13.91□□□□□ -0.18
CPNE1-220ENST00000458038 BAGE2Q86Y30 109 aa13.91□□□□□ -0.18
CPNE1-220ENST00000458038 SMIM17P0DL12 118 aa13.9□□□□□ -0.18
CPNE1-220ENST00000458038 RPL19P84098 196 aaKnown RBP13.9□□□□□ -0.18
CPNE1-220ENST00000458038 CLRN3Q8NCR9 226 aa13.9□□□□□ -0.18
CPNE1-220ENST00000458038 TRBV25-1A0A075B6N4 114 aa13.89□□□□□ -0.19
CPNE1-220ENST00000458038 UMAD1C9J7I0 102 aa13.89□□□□□ -0.19
CPNE1-220ENST00000458038 ARPC5O15511 151 aa13.89□□□□□ -0.19
CPNE1-220ENST00000458038 PFDN1O60925 122 aa13.89□□□□□ -0.19
CPNE1-220ENST00000458038 SFT2D1Q8WV19 159 aa13.89□□□□□ -0.19
CPNE1-220ENST00000458038 MBD3L1Q8WWY6 194 aa13.89□□□□□ -0.19
CPNE1-220ENST00000458038 RBX1P62877 108 aa13.88□□□□□ -0.19
CPNE1-220ENST00000458038 NTM-AS1Q6ZSK4 140 aa13.88□□□□□ -0.19
CPNE1-220ENST00000458038 DERL1Q9BUN8 251 aa13.88□□□□□ -0.19
CPNE1-220ENST00000458038 PLA2G2DQ9UNK4 145 aa13.88□□□□□ -0.19
CPNE1-220ENST00000458038 G3V3Q6 166 aa13.87□□□□□ -0.19
CPNE1-220ENST00000458038 LINC00269Q8N2A0 174 aa13.87□□□□□ -0.19
CPNE1-220ENST00000458038 AP1S3Q96PC3 154 aa13.87□□□□□ -0.19
CPNE1-220ENST00000458038 SCO2A0A1W2PP80 73 aa13.86□□□□□ -0.19
CPNE1-220ENST00000458038 IQCJQ1A5X6 159 aa13.86□□□□□ -0.19
CPNE1-220ENST00000458038 KIF25-AS1Q9Y6Z4 181 aa13.86□□□□□ -0.19
CPNE1-220ENST00000458038 FAT3Q8TDW7 4589 aa13.85□□□□□ -0.19
CPNE1-220ENST00000458038 H7C1H1 209 aa13.85□□□□□ -0.19
CPNE1-220ENST00000458038 KRTAP26-1Q6PEX3 210 aa13.85□□□□□ -0.19
CPNE1-220ENST00000458038 TMUB2Q71RG4 321 aa13.85□□□□□ -0.19
CPNE1-220ENST00000458038 IGHV1-24A0A0C4DH33 117 aa13.84□□□□□ -0.19
CPNE1-220ENST00000458038 GAGE6Q13070 117 aa13.84□□□□□ -0.19
CPNE1-220ENST00000458038 SDIM1Q6ZPB5 146 aa13.84□□□□□ -0.19
CPNE1-220ENST00000458038 FAM213BQ8TBF2 198 aa13.84□□□□□ -0.19
CPNE1-220ENST00000458038 DAZAP1Q96EP5 407 aaKnown RBP13.84□□□□□ -0.19
CPNE1-220ENST00000458038 TRAV8-4A0A0B4J246 113 aa13.83□□□□□ -0.2
CPNE1-220ENST00000458038 A0A0D9SG52 128 aa13.83□□□□□ -0.2
CPNE1-220ENST00000458038 MUC21A0A0G2JKD1 596 aa13.83□□□□□ -0.2
CPNE1-220ENST00000458038 MUC21A0A140T8X8 626 aa13.83□□□□□ -0.2
CPNE1-220ENST00000458038 P01737 135 aa13.83□□□□□ -0.2
CPNE1-220ENST00000458038 ZNF345Q14585 488 aa13.83□□□□□ -0.2
CPNE1-220ENST00000458038 CNBPP62633 177 aaKnown RBP13.82□□□□□ -0.2
CPNE1-220ENST00000458038 KCNRGQ8N5I3 272 aa13.82□□□□□ -0.2
CPNE1-220ENST00000458038 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.82□□□□□ -0.2
CPNE1-220ENST00000458038 A0A1B0GUV1 79 aa13.81□□□□□ -0.2
CPNE1-220ENST00000458038 GZMBP10144 247 aa13.81□□□□□ -0.2
CPNE1-220ENST00000458038 REG3AQ06141 175 aa13.81□□□□□ -0.2
CPNE1-220ENST00000458038 CLPSL2Q6UWE3 100 aa13.81□□□□□ -0.2
CPNE1-220ENST00000458038 M0QY20 66 aa13.8□□□□□ -0.2
CPNE1-220ENST00000458038 H2AFB1P0C5Y9 115 aa13.8□□□□□ -0.2
CPNE1-220ENST00000458038 SSTP61278 116 aa13.8□□□□□ -0.2
CPNE1-220ENST00000458038 CIRBPQ14011 172 aaKnown RBP13.8□□□□□ -0.2
CPNE1-220ENST00000458038 PKHD1L1Q86WI1 4243 aa13.79□□□□□ -0.2
CPNE1-220ENST00000458038 HMCN2Q8NDA2 5059 aa13.79□□□□□ -0.2
CPNE1-220ENST00000458038 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.79□□□□□ -0.2
CPNE1-220ENST00000458038 RPL35P42766 123 aaKnown RBP13.79□□□□□ -0.2
CPNE1-220ENST00000458038 RPS20P60866 119 aaKnown RBP13.79□□□□□ -0.2
CPNE1-220ENST00000458038 Q6ZRU5 148 aa13.79□□□□□ -0.2
CPNE1-220ENST00000458038 RNF185Q96GF1 192 aa13.79□□□□□ -0.2
CPNE1-220ENST00000458038 AP5S1Q9NUS5 200 aa13.79□□□□□ -0.2
CPNE1-220ENST00000458038 A0A1B0GV50 99 aa13.78□□□□□ -0.2
CPNE1-220ENST00000458038 HNRNPA3P51991 378 aaKnown RBP13.78□□□□□ -0.2
CPNE1-220ENST00000458038 CACNG7P62955 275 aa13.78□□□□□ -0.2
CPNE1-220ENST00000458038 EIF5AP63241 154 aaKnown RBP13.78□□□□□ -0.2
CPNE1-220ENST00000458038 FER1L6-AS1Q8NA97 138 aa13.78□□□□□ -0.2
CPNE1-220ENST00000458038 TMEM243Q9BU79 118 aa13.78□□□□□ -0.2
CPNE1-220ENST00000458038 hDV102S1A0JD36 115 aa13.77□□□□□ -0.21
CPNE1-220ENST00000458038 MGPP08493 103 aa13.77□□□□□ -0.21
CPNE1-220ENST00000458038 MANBALQ9NQG1 85 aa13.77□□□□□ -0.21
CPNE1-220ENST00000458038 IGLV10-54A0A075B6I4 117 aa13.76□□□□□ -0.21
CPNE1-220ENST00000458038 IGHV3-64A0A075B6Q5 118 aa13.76□□□□□ -0.21
CPNE1-220ENST00000458038 XKRY2A2RUG3 117 aa13.76□□□□□ -0.21
CPNE1-220ENST00000458038 HMSDA8MTL9 139 aa13.76□□□□□ -0.21
CPNE1-220ENST00000458038 F2Z2F3 143 aa13.76□□□□□ -0.21
CPNE1-220ENST00000458038 IGLC6P0CF74 106 aa13.76□□□□□ -0.21
CPNE1-220ENST00000458038 C20orf203Q8NBC4 194 aa13.76□□□□□ -0.21
CPNE1-220ENST00000458038 C11orf52Q96A22 123 aa13.76□□□□□ -0.21
CPNE1-220ENST00000458038 SMIM12Q96EX1 92 aa13.76□□□□□ -0.21
CPNE1-220ENST00000458038 DPH3Q96FX2 82 aa13.76□□□□□ -0.21
CPNE1-220ENST00000458038 PGLYRP4Q96LB8 373 aa13.76□□□□□ -0.21
CPNE1-220ENST00000458038 PANO1I0J062 215 aa13.75□□□□□ -0.21
CPNE1-220ENST00000458038 RGS21Q2M5E4 152 aa13.75□□□□□ -0.21
CPNE1-220ENST00000458038 SUMO4Q6EEV6 95 aa13.75□□□□□ -0.21
CPNE1-220ENST00000458038 RASL11AQ6T310 242 aa13.75□□□□□ -0.21
CPNE1-220ENST00000458038 TPPP3Q9BW30 176 aa13.75□□□□□ -0.21
CPNE1-220ENST00000458038 KANTRA0A1W2PQU2 76 aa13.74□□□□□ -0.21
CPNE1-220ENST00000458038 OR2D3Q8NGH3 330 aa13.74□□□□□ -0.21
CPNE1-220ENST00000458038 BCL2L11O43521 198 aa13.73□□□□□ -0.21
CPNE1-220ENST00000458038 TRGC1P0CF51 173 aa13.73□□□□□ -0.21
CPNE1-220ENST00000458038 NIT2Q9NQR4 276 aa13.73□□□□□ -0.21
CPNE1-220ENST00000458038 UBE2L6O14933 153 aa13.72□□□□□ -0.21
CPNE1-220ENST00000458038 NKX2-5P52952 324 aaPredicted RBP13.72□□□□□ -0.21
CPNE1-220ENST00000458038 WDR73Q6P4I2 378 aa13.72□□□□□ -0.21
CPNE1-220ENST00000458038 IGLV4-60A0A075B6I1 120 aa13.71□□□□□ -0.21
CPNE1-220ENST00000458038 TRAV1-1A0A0B4J248 108 aa13.71□□□□□ -0.21
CPNE1-220ENST00000458038 C19orf71A6NCJ1 209 aa13.71□□□□□ -0.21
CPNE1-220ENST00000458038 SMLR1H3BR10 107 aa13.71□□□□□ -0.21
CPNE1-220ENST00000458038 CENPWQ5EE01 88 aa13.71□□□□□ -0.21
CPNE1-220ENST00000458038 CFAP161Q6P656 301 aa13.71□□□□□ -0.21
CPNE1-220ENST00000458038 BIN3Q9NQY0 253 aa13.71□□□□□ -0.21
CPNE1-220ENST00000458038 GNG13Q9P2W3 67 aa13.71□□□□□ -0.21
CPNE1-220ENST00000458038 TEX46H3BTG2 121 aa13.7□□□□□ -0.22
CPNE1-220ENST00000458038 MT1HL1P0DM35 61 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms