RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 CHTOPQ9Y3Y2 248 aaKnown RBP9.99□□□□□ -0.81
CLK3-203ENST00000454830 TNFRSF18Q9Y5U5 241 aa9.99□□□□□ -0.81
CLK3-203ENST00000454830 AZU1P20160 251 aa9.99□□□□□ -0.81
CLK3-203ENST00000454830 ZFP2Q6ZN57 461 aa9.99□□□□□ -0.81
CLK3-203ENST00000454830 TEP1Q99973 2627 aaKnown RBP9.99□□□□□ -0.81
CLK3-203ENST00000454830 H7C1H1 209 aa9.99□□□□□ -0.81
CLK3-203ENST00000454830 M0QY20 66 aa9.98□□□□□ -0.81
CLK3-203ENST00000454830 NDUFA7O95182 113 aa9.98□□□□□ -0.81
CLK3-203ENST00000454830 PRSS47A8MTI9 375 aa9.98□□□□□ -0.81
CLK3-203ENST00000454830 TOMM6Q96B49 74 aa9.98□□□□□ -0.81
CLK3-203ENST00000454830 LINC01546A6NGU7 62 aa9.97□□□□□ -0.81
CLK3-203ENST00000454830 Q6ZVH6 145 aa9.97□□□□□ -0.81
CLK3-203ENST00000454830 ERASQ7Z444 233 aa9.97□□□□□ -0.81
CLK3-203ENST00000454830 A0A087WX48 190 aa9.97□□□□□ -0.81
CLK3-203ENST00000454830 A8MWV9 139 aa9.97□□□□□ -0.81
CLK3-203ENST00000454830 PHLDA1Q8WV24 401 aaPredicted RBP9.97□□□□□ -0.81
CLK3-203ENST00000454830 POLR2KP53803 58 aaKnown RBP9.96□□□□□ -0.81
CLK3-203ENST00000454830 IGHV3-38A0A0C4DH36 116 aa9.96□□□□□ -0.81
CLK3-203ENST00000454830 PRSS29PA6NIE9 313 aa9.96□□□□□ -0.82
CLK3-203ENST00000454830 DEFB125Q8N687 156 aa9.96□□□□□ -0.82
CLK3-203ENST00000454830 IGLV1-51P01701 117 aa9.95□□□□□ -0.82
CLK3-203ENST00000454830 KRTAP10-3P60369 221 aa9.95□□□□□ -0.82
CLK3-203ENST00000454830 TMEM97Q5BJF2 176 aa9.95□□□□□ -0.82
CLK3-203ENST00000454830 C12orf54Q6X4T0 127 aa9.95□□□□□ -0.82
CLK3-203ENST00000454830 OR4C5Q8NGB2 326 aa9.95□□□□□ -0.82
CLK3-203ENST00000454830 IGKV2D-26A0A0A0MRZ7 120 aa9.95□□□□□ -0.82
CLK3-203ENST00000454830 ADARB2-AS1A8MUL3 147 aa9.95□□□□□ -0.82
CLK3-203ENST00000454830 F8VRH5 84 aa9.95□□□□□ -0.82
CLK3-203ENST00000454830 BAALCQ8WXS3 180 aa9.95□□□□□ -0.82
CLK3-203ENST00000454830 AKAP9Q99996 3911 aa9.95□□□□□ -0.82
CLK3-203ENST00000454830 MRPL52Q86TS9 123 aaKnown RBP9.95□□□□□ -0.82
CLK3-203ENST00000454830 NDUFA11Q86Y39 141 aa9.95□□□□□ -0.82
CLK3-203ENST00000454830 C1orf158Q8N1D5 194 aa9.95□□□□□ -0.82
CLK3-203ENST00000454830 I3L3M4 83 aa9.94□□□□□ -0.82
CLK3-203ENST00000454830 K7EMI3 77 aa9.94□□□□□ -0.82
CLK3-203ENST00000454830 OPRPNQ99935 248 aaPredicted RBP9.94□□□□□ -0.82
CLK3-203ENST00000454830 CMC4P56277 68 aaPredicted RBP9.94□□□□□ -0.82
CLK3-203ENST00000454830 MORN3Q6PF18 240 aaPredicted RBP9.94□□□□□ -0.82
CLK3-203ENST00000454830 NOP10Q9NPE3 64 aaKnown RBP9.94□□□□□ -0.82
CLK3-203ENST00000454830 ANK3Q12955 4377 aaKnown RBP9.94□□□□□ -0.82
CLK3-203ENST00000454830 PLNP26678 52 aa9.94□□□□□ -0.82
CLK3-203ENST00000454830 SPXQ9BT56 116 aa9.94□□□□□ -0.82
CLK3-203ENST00000454830 Q9UF83 564 aa9.93□□□□□ -0.82
CLK3-203ENST00000454830 TRGV2A0A075B6R0 118 aa9.93□□□□□ -0.82
CLK3-203ENST00000454830 TMEM170BQ5T4T1 132 aa9.93□□□□□ -0.82
CLK3-203ENST00000454830 CFAP126Q5VTH2 177 aa9.93□□□□□ -0.82
CLK3-203ENST00000454830 A8MTW9 85 aa9.93□□□□□ -0.82
CLK3-203ENST00000454830 RRN3P1Q2M238 152 aa9.93□□□□□ -0.82
CLK3-203ENST00000454830 TRBV27A0A0K0K1C4 114 aa9.92□□□□□ -0.82
CLK3-203ENST00000454830 RIPPLY3P57055 190 aa9.92□□□□□ -0.82
CLK3-203ENST00000454830 Q6ZSN1 163 aa9.92□□□□□ -0.82
CLK3-203ENST00000454830 Q6ZTI0 123 aa9.92□□□□□ -0.82
CLK3-203ENST00000454830 POM121L12Q8N7R1 296 aa9.92□□□□□ -0.82
CLK3-203ENST00000454830 HHLA3Q9XRX5 114 aa9.92□□□□□ -0.82
CLK3-203ENST00000454830 OR11H2Q8NH07 326 aa9.92□□□□□ -0.82
CLK3-203ENST00000454830 C11orf72Q8NBR9 251 aa9.92□□□□□ -0.82
CLK3-203ENST00000454830 GAGE12BA1L429 117 aa9.91□□□□□ -0.82
CLK3-203ENST00000454830 GAGE7O76087 117 aa9.91□□□□□ -0.82
CLK3-203ENST00000454830 GAGE12FP0CL80 117 aa9.91□□□□□ -0.82
CLK3-203ENST00000454830 GAGE12GP0CL81 117 aa9.91□□□□□ -0.82
CLK3-203ENST00000454830 GAGE12IP0CL82 117 aa9.91□□□□□ -0.82
CLK3-203ENST00000454830 BVES-AS1Q5T3Y7 98 aa9.91□□□□□ -0.82
CLK3-203ENST00000454830 NEXN-AS1Q8NBZ9 246 aa9.91□□□□□ -0.82
CLK3-203ENST00000454830 NBEAL2Q6ZNJ1 2754 aa9.91□□□□□ -0.82
CLK3-203ENST00000454830 TRBV6-5A0A0K0K1A5 114 aa9.91□□□□□ -0.82
CLK3-203ENST00000454830 RHODO00212 210 aa9.91□□□□□ -0.82
CLK3-203ENST00000454830 GCSHP23434 173 aa9.91□□□□□ -0.82
CLK3-203ENST00000454830 RNASE13Q5GAN3 156 aaKnown RBP9.91□□□□□ -0.82
CLK3-203ENST00000454830 BOD1L2Q8IYS8 172 aa9.91□□□□□ -0.82
CLK3-203ENST00000454830 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.91□□□□□ -0.82
CLK3-203ENST00000454830 C2orf91Q6ZV80 131 aa9.91□□□□□ -0.82
CLK3-203ENST00000454830 PMVKQ15126 192 aa9.9□□□□□ -0.82
CLK3-203ENST00000454830 ZNRF2Q8NHG8 242 aa9.9□□□□□ -0.82
CLK3-203ENST00000454830 C1QTNF4Q9BXJ3 329 aa9.9□□□□□ -0.82
CLK3-203ENST00000454830 TRAV12-1A0A0B4J245 112 aa9.9□□□□□ -0.83
CLK3-203ENST00000454830 PTTG1IPP53801 180 aa9.9□□□□□ -0.83
CLK3-203ENST00000454830 LURAP1LQ8IV03 231 aa9.9□□□□□ -0.83
CLK3-203ENST00000454830 ZNF479Q96JC4 524 aa9.9□□□□□ -0.83
CLK3-203ENST00000454830 TSHBP01222 138 aa9.89□□□□□ -0.83
CLK3-203ENST00000454830 FGF6P10767 208 aa9.89□□□□□ -0.83
CLK3-203ENST00000454830 VAMP3Q15836 100 aa9.89□□□□□ -0.83
CLK3-203ENST00000454830 CEMP1Q6PRD7 247 aaPredicted RBP9.89□□□□□ -0.83
CLK3-203ENST00000454830 VCX2Q9H322 139 aa9.89□□□□□ -0.83
CLK3-203ENST00000454830 ZMAT4Q9H898 229 aa9.89□□□□□ -0.83
CLK3-203ENST00000454830 RPL32P62910 135 aaKnown RBP9.89□□□□□ -0.83
CLK3-203ENST00000454830 DGAT2L7PQ6IED9 249 aa9.89□□□□□ -0.83
CLK3-203ENST00000454830 LINC00469Q8N7U9 141 aa9.89□□□□□ -0.83
CLK3-203ENST00000454830 LINC00482Q8N8I6 264 aa9.89□□□□□ -0.83
CLK3-203ENST00000454830 RAB37Q96AX2 223 aa9.89□□□□□ -0.83
CLK3-203ENST00000454830 IGHV3-64A0A075B6Q5 118 aa9.88□□□□□ -0.83
CLK3-203ENST00000454830 CRLF1O75462 422 aa9.88□□□□□ -0.83
CLK3-203ENST00000454830 COTL1Q14019 142 aa9.88□□□□□ -0.83
CLK3-203ENST00000454830 RHOHQ15669 191 aa9.88□□□□□ -0.83
CLK3-203ENST00000454830 SCGB1D4Q6XE38 83 aa9.88□□□□□ -0.83
CLK3-203ENST00000454830 TMEM263Q8WUH6 116 aaKnown RBP9.88□□□□□ -0.83
CLK3-203ENST00000454830 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.88□□□□□ -0.83
CLK3-203ENST00000454830 IGKV2-29A2NJV5 120 aaPredicted RBP9.88□□□□□ -0.83
CLK3-203ENST00000454830 C20orf203Q8NBC4 194 aa9.88□□□□□ -0.83
CLK3-203ENST00000454830 TMEM141Q96I45 108 aa9.88□□□□□ -0.83
CLK3-203ENST00000454830 TENM1Q9UKZ4 2725 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms