RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 A0A087WX48 190 aa7.97□□□□□ -1.13
USP40-210ENST00000454354 TRBV6-8A0A0A6YYG3 113 aa7.97□□□□□ -1.13
USP40-210ENST00000454354 SMIM17P0DL12 118 aa7.97□□□□□ -1.13
USP40-210ENST00000454354 GZMBP10144 247 aa7.97□□□□□ -1.13
USP40-210ENST00000454354 ATRAIDQ6UW56 229 aa7.97□□□□□ -1.13
USP40-210ENST00000454354 RMI2Q96E14 147 aa7.97□□□□□ -1.13
USP40-210ENST00000454354 TMEM70Q9BUB7 260 aa7.97□□□□□ -1.13
USP40-210ENST00000454354 BIN3Q9NQY0 253 aa7.97□□□□□ -1.13
USP40-210ENST00000454354 XKRY2A2RUG3 117 aa7.96□□□□□ -1.14
USP40-210ENST00000454354 RBFOX3A6NFN3 312 aa7.96□□□□□ -1.14
USP40-210ENST00000454354 P01737 135 aa7.96□□□□□ -1.14
USP40-210ENST00000454354 CACNG7P62955 275 aa7.96□□□□□ -1.14
USP40-210ENST00000454354 ELOBQ15370 118 aa7.96□□□□□ -1.14
USP40-210ENST00000454354 KLK12Q9UKR0 248 aa7.96□□□□□ -1.14
USP40-210ENST00000454354 EPM2AB3EWF7 344 aa7.95□□□□□ -1.14
USP40-210ENST00000454354 F2Z2F3 143 aa7.95□□□□□ -1.14
USP40-210ENST00000454354 F5H697 171 aa7.95□□□□□ -1.14
USP40-210ENST00000454354 PKIAP61925 76 aa7.95□□□□□ -1.14
USP40-210ENST00000454354 TMEM97Q5BJF2 176 aa7.95□□□□□ -1.14
USP40-210ENST00000454354 KCNIP4Q6PIL6 250 aa7.95□□□□□ -1.14
USP40-210ENST00000454354 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.95□□□□□ -1.14
USP40-210ENST00000454354 DNAJC30Q96LL9 226 aa7.95□□□□□ -1.14
USP40-210ENST00000454354 M0QY20 66 aa7.94□□□□□ -1.14
USP40-210ENST00000454354 CTRLP40313 264 aa7.94□□□□□ -1.14
USP40-210ENST00000454354 SSTP61278 116 aa7.94□□□□□ -1.14
USP40-210ENST00000454354 Q0VG73 95 aa7.94□□□□□ -1.14
USP40-210ENST00000454354 MPV17L2Q567V2 206 aa7.94□□□□□ -1.14
USP40-210ENST00000454354 LCE2DQ5TA82 110 aaPredicted RBP7.94□□□□□ -1.14
USP40-210ENST00000454354 NTM-AS1Q6ZSK4 140 aa7.94□□□□□ -1.14
USP40-210ENST00000454354 LYPD6BQ8NI32 183 aa7.94□□□□□ -1.14
USP40-210ENST00000454354 UBE2WQ96B02 151 aa7.94□□□□□ -1.14
USP40-210ENST00000454354 TPPP3Q9BW30 176 aa7.94□□□□□ -1.14
USP40-210ENST00000454354 CNFNQ9BYD5 112 aa7.94□□□□□ -1.14
USP40-210ENST00000454354 IGKV2D-24A0A075B6R9 120 aa7.93□□□□□ -1.14
USP40-210ENST00000454354 TMEM250H0YL14 139 aa7.93□□□□□ -1.14
USP40-210ENST00000454354 H7C1H1 209 aa7.93□□□□□ -1.14
USP40-210ENST00000454354 LECT2O14960 151 aa7.93□□□□□ -1.14
USP40-210ENST00000454354 TRGC1P0CF51 173 aa7.93□□□□□ -1.14
USP40-210ENST00000454354 BLOC1S1P78537 153 aa7.93□□□□□ -1.14
USP40-210ENST00000454354 Q5VSD8 79 aa7.93□□□□□ -1.14
USP40-210ENST00000454354 SUMO4Q6EEV6 95 aa7.93□□□□□ -1.14
USP40-210ENST00000454354 WDR73Q6P4I2 378 aa7.93□□□□□ -1.14
USP40-210ENST00000454354 LYZL1Q6UWQ5 148 aa7.93□□□□□ -1.14
USP40-210ENST00000454354 ALKAL2Q6UX46 152 aa7.93□□□□□ -1.14
USP40-210ENST00000454354 NUDT10Q8NFP7 164 aa7.93□□□□□ -1.14
USP40-210ENST00000454354 BAALCQ8WXS3 180 aa7.93□□□□□ -1.14
USP40-210ENST00000454354 NUDT11Q96G61 164 aa7.93□□□□□ -1.14
USP40-210ENST00000454354 MYCBP2O75592 4640 aa7.92□□□□□ -1.14
USP40-210ENST00000454354 TMEM262E9PQX1 116 aa7.92□□□□□ -1.14
USP40-210ENST00000454354 K7EN84 100 aa7.92□□□□□ -1.14
USP40-210ENST00000454354 MGPP08493 103 aa7.92□□□□□ -1.14
USP40-210ENST00000454354 IQCJQ1A5X6 159 aa7.92□□□□□ -1.14
USP40-210ENST00000454354 ENHOQ6UWT2 76 aa7.92□□□□□ -1.14
USP40-210ENST00000454354 Q6ZSA8 131 aa7.92□□□□□ -1.14
USP40-210ENST00000454354 OCC1Q8TAD7 63 aa7.92□□□□□ -1.14
USP40-210ENST00000454354 FRZBQ92765 325 aa7.92□□□□□ -1.14
USP40-210ENST00000454354 CHCHD5Q9BSY4 110 aa7.92□□□□□ -1.14
USP40-210ENST00000454354 DPH3P1Q9H4G8 78 aa7.92□□□□□ -1.14
USP40-210ENST00000454354 RPP21Q9H633 154 aaKnown RBP7.92□□□□□ -1.14
USP40-210ENST00000454354 DMBT1Q9UGM3 2413 aaPredicted RBP7.91□□□□□ -1.14
USP40-210ENST00000454354 TRBV25-1A0A075B6N4 114 aa7.91□□□□□ -1.14
USP40-210ENST00000454354 CRPP02741 224 aa7.91□□□□□ -1.14
USP40-210ENST00000454354 NTF3P20783 257 aa7.91□□□□□ -1.14
USP40-210ENST00000454354 C15orf54Q8N8G6 183 aa7.91□□□□□ -1.14
USP40-210ENST00000454354 Q8N976 141 aa7.91□□□□□ -1.14
USP40-210ENST00000454354 RNASE7Q9H1E1 156 aaKnown RBP7.91□□□□□ -1.14
USP40-210ENST00000454354 FAM30AQ9NZY2 134 aa7.91□□□□□ -1.14
USP40-210ENST00000454354 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.9□□□□□ -1.14
USP40-210ENST00000454354 NDUFS6O75380 124 aaKnown RBP7.9□□□□□ -1.14
USP40-210ENST00000454354 ANGP03950 147 aaKnown RBP7.9□□□□□ -1.14
USP40-210ENST00000454354 HAMPP81172 84 aa7.9□□□□□ -1.14
USP40-210ENST00000454354 MIAQ16674 131 aa7.9□□□□□ -1.14
USP40-210ENST00000454354 RASL11AQ6T310 242 aa7.9□□□□□ -1.14
USP40-210ENST00000454354 C1orf43Q9BWL3 253 aa7.9□□□□□ -1.14
USP40-210ENST00000454354 PRR34Q9NV39 138 aa7.9□□□□□ -1.14
USP40-210ENST00000454354 IGHV1-24A0A0C4DH33 117 aa7.89□□□□□ -1.15
USP40-210ENST00000454354 RBX1P62877 108 aa7.89□□□□□ -1.15
USP40-210ENST00000454354 FAM231DQ6ZW35 169 aa7.89□□□□□ -1.15
USP40-210ENST00000454354 PGLYRP4Q96LB8 373 aa7.89□□□□□ -1.15
USP40-210ENST00000454354 NIT2Q9NQR4 276 aa7.89□□□□□ -1.15
USP40-210ENST00000454354 FLG2Q5D862 2391 aaPredicted RBP7.89□□□□□ -1.15
USP40-210ENST00000454354 SMR3BP02814 79 aaPredicted RBP7.88□□□□□ -1.15
USP40-210ENST00000454354 NKX2-5P52952 324 aaPredicted RBP7.88□□□□□ -1.15
USP40-210ENST00000454354 C14orf177Q52M58 125 aa7.88□□□□□ -1.15
USP40-210ENST00000454354 GTSF1Q8WW33 167 aa7.88□□□□□ -1.15
USP40-210ENST00000454354 HERC1Q15751 4861 aa7.88□□□□□ -1.15
USP40-210ENST00000454354 INAFM2P0DMQ5 153 aa7.87□□□□□ -1.15
USP40-210ENST00000454354 GAGE6Q13070 117 aa7.87□□□□□ -1.15
USP40-210ENST00000454354 TWIST1Q15672 202 aa7.87□□□□□ -1.15
USP40-210ENST00000454354 CT83Q5H943 113 aa7.87□□□□□ -1.15
USP40-210ENST00000454354 A0A1B0GUV1 79 aa7.86□□□□□ -1.15
USP40-210ENST00000454354 FAM229AH3BQW9 127 aa7.86□□□□□ -1.15
USP40-210ENST00000454354 GATCO43716 136 aaKnown RBP7.86□□□□□ -1.15
USP40-210ENST00000454354 KRTAP26-1Q6PEX3 210 aa7.86□□□□□ -1.15
USP40-210ENST00000454354 LINC00269Q8N2A0 174 aa7.86□□□□□ -1.15
USP40-210ENST00000454354 FAM210AQ96ND0 272 aa7.86□□□□□ -1.15
USP40-210ENST00000454354 TMEM243Q9BU79 118 aa7.86□□□□□ -1.15
USP40-210ENST00000454354 A8MWL6 223 aa7.85□□□□□ -1.15
USP40-210ENST00000454354 HLA-DQA1P01909 254 aa7.85□□□□□ -1.15
USP40-210ENST00000454354 FOXA3P55318 350 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms