RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 ADAMTSL4-AS1Q5T5F5 129 aa6.24□□□□□ -1.41
SMCO1-202ENST00000452776 SUMO4Q6EEV6 95 aa6.24□□□□□ -1.41
SMCO1-202ENST00000452776 APRG1Q8IVJ8 170 aa6.24□□□□□ -1.41
SMCO1-202ENST00000452776 MAFAQ8NHW3 353 aaPredicted RBP6.24□□□□□ -1.41
SMCO1-202ENST00000452776 MBD3L2Q8NHZ7 208 aaPredicted RBP6.24□□□□□ -1.41
SMCO1-202ENST00000452776 KLK9Q9UKQ9 250 aa6.24□□□□□ -1.41
SMCO1-202ENST00000452776 A0A0J9YXV3 536 aa6.23□□□□□ -1.41
SMCO1-202ENST00000452776 PRB4P10163 310 aaPredicted RBP6.23□□□□□ -1.41
SMCO1-202ENST00000452776 LCE3BQ5TA77 95 aa6.23□□□□□ -1.41
SMCO1-202ENST00000452776 C16orf92Q96LL3 132 aa6.23□□□□□ -1.41
SMCO1-202ENST00000452776 UBE2D4Q9Y2X8 147 aa6.23□□□□□ -1.41
SMCO1-202ENST00000452776 TRAV13-2A0A0B4J235 113 aa6.22□□□□□ -1.41
SMCO1-202ENST00000452776 F5H697 171 aa6.22□□□□□ -1.41
SMCO1-202ENST00000452776 H0YGX0 51 aa6.22□□□□□ -1.41
SMCO1-202ENST00000452776 SOCS3O14543 225 aa6.22□□□□□ -1.41
SMCO1-202ENST00000452776 NDUFA1O15239 70 aa6.22□□□□□ -1.41
SMCO1-202ENST00000452776 FAM110DQ8TAY7 271 aaPredicted RBP6.22□□□□□ -1.41
SMCO1-202ENST00000452776 OBSCN-AS1Q96MR7 158 aa6.22□□□□□ -1.41
SMCO1-202ENST00000452776 HTTP42858 3142 aa6.22□□□□□ -1.41
SMCO1-202ENST00000452776 IGLV4-3A0A075B6K6 122 aa6.22□□□□□ -1.41
SMCO1-202ENST00000452776 HIST2H2BCQ6DN03 193 aa6.22□□□□□ -1.41
SMCO1-202ENST00000452776 HIST2H2BDQ6DRA6 164 aa6.22□□□□□ -1.41
SMCO1-202ENST00000452776 C9orf106Q8NAJ2 232 aa6.22□□□□□ -1.41
SMCO1-202ENST00000452776 CYSTM1Q9H1C7 97 aa6.22□□□□□ -1.41
SMCO1-202ENST00000452776 LINC01561Q8N1V8 128 aa6.21□□□□□ -1.42
SMCO1-202ENST00000452776 DEFB123Q8N688 67 aa6.21□□□□□ -1.42
SMCO1-202ENST00000452776 ZFAND2AQ8N6M9 145 aa6.21□□□□□ -1.42
SMCO1-202ENST00000452776 LINC00308Q8TCZ7 52 aa6.21□□□□□ -1.42
SMCO1-202ENST00000452776 DSCAMO60469 2012 aa6.21□□□□□ -1.42
SMCO1-202ENST00000452776 PIEZO1Q92508 2521 aa6.21□□□□□ -1.42
SMCO1-202ENST00000452776 PRR14LQ5THK1 2151 aa6.2□□□□□ -1.42
SMCO1-202ENST00000452776 IGHV3-64A0A075B6Q5 118 aa6.2□□□□□ -1.42
SMCO1-202ENST00000452776 TRAV7A0A075B6U4 112 aa6.2□□□□□ -1.42
SMCO1-202ENST00000452776 TRAV12-3A0A0B4J271 114 aa6.2□□□□□ -1.42
SMCO1-202ENST00000452776 GHRHP01286 108 aa6.2□□□□□ -1.42
SMCO1-202ENST00000452776 RNASE3P12724 160 aaKnown RBP6.2□□□□□ -1.42
SMCO1-202ENST00000452776 RPL28P46779 137 aaKnown RBP6.2□□□□□ -1.42
SMCO1-202ENST00000452776 XCL1P47992 114 aa6.2□□□□□ -1.42
SMCO1-202ENST00000452776 FHL2Q14192 279 aa6.2□□□□□ -1.42
SMCO1-202ENST00000452776 PRSS33Q8NF86 280 aa6.2□□□□□ -1.42
SMCO1-202ENST00000452776 DPM3Q9P2X0 92 aa6.2□□□□□ -1.42
SMCO1-202ENST00000452776 XCL2Q9UBD3 114 aa6.2□□□□□ -1.42
SMCO1-202ENST00000452776 PKIGQ9Y2B9 76 aa6.2□□□□□ -1.42
SMCO1-202ENST00000452776 U3KQE9 123 aa6.2□□□□□ -1.42
SMCO1-202ENST00000452776 NAV3Q8IVL0 2385 aa6.2□□□□□ -1.42
SMCO1-202ENST00000452776 IGKV3D-7A0A0C4DH55 119 aa6.2□□□□□ -1.42
SMCO1-202ENST00000452776 ITLN2Q8WWU7 325 aaPredicted RBP6.2□□□□□ -1.42
SMCO1-202ENST00000452776 LAMA3Q16787 3333 aa6.19□□□□□ -1.42
SMCO1-202ENST00000452776 FAM223BA6NKX1 122 aa6.19□□□□□ -1.42
SMCO1-202ENST00000452776 CD28P10747 220 aa6.19□□□□□ -1.42
SMCO1-202ENST00000452776 ZNF576Q9H609 170 aa6.19□□□□□ -1.42
SMCO1-202ENST00000452776 RPL11P62913 178 aaKnown RBP6.18□□□□□ -1.42
SMCO1-202ENST00000452776 LYPD2Q6UXB3 125 aa6.18□□□□□ -1.42
SMCO1-202ENST00000452776 VMO1Q7Z5L0 202 aa6.18□□□□□ -1.42
SMCO1-202ENST00000452776 S4R3C0 116 aa6.18□□□□□ -1.42
SMCO1-202ENST00000452776 DOCK10Q96BY6 2186 aa6.18□□□□□ -1.42
SMCO1-202ENST00000452776 JMJD7-PLA2G4BH0Y9G9 81 aa6.18□□□□□ -1.42
SMCO1-202ENST00000452776 M0QY20 66 aa6.18□□□□□ -1.42
SMCO1-202ENST00000452776 KLKP1Q107X0 134 aa6.18□□□□□ -1.42
SMCO1-202ENST00000452776 LYPD5Q6UWN5 251 aa6.18□□□□□ -1.42
SMCO1-202ENST00000452776 CCL17Q92583 94 aa6.18□□□□□ -1.42
SMCO1-202ENST00000452776 LINC00846Q9NV44 126 aa6.18□□□□□ -1.42
SMCO1-202ENST00000452776 C22orf24Q9Y442 160 aa6.18□□□□□ -1.42
SMCO1-202ENST00000452776 ADARB2-AS1A8MUL3 147 aa6.17□□□□□ -1.42
SMCO1-202ENST00000452776 GNRH2O43555 120 aa6.17□□□□□ -1.42
SMCO1-202ENST00000452776 CCKP06307 115 aa6.17□□□□□ -1.42
SMCO1-202ENST00000452776 PRR9Q5T870 116 aa6.17□□□□□ -1.42
SMCO1-202ENST00000452776 C16orf95Q9H693 158 aa6.17□□□□□ -1.42
SMCO1-202ENST00000452776 CLPSL1A2RUU4 121 aa6.16□□□□□ -1.42
SMCO1-202ENST00000452776 C6orf226Q5I0X4 101 aa6.16□□□□□ -1.42
SMCO1-202ENST00000452776 Q6ZSV7 163 aa6.16□□□□□ -1.42
SMCO1-202ENST00000452776 C20orf197Q8N268 126 aa6.16□□□□□ -1.42
SMCO1-202ENST00000452776 Q8N3U1 123 aa6.16□□□□□ -1.42
SMCO1-202ENST00000452776 IGLV5-45A0A087WSX0 123 aa6.15□□□□□ -1.42
SMCO1-202ENST00000452776 EPOPA6NHQ4 379 aa6.15□□□□□ -1.42
SMCO1-202ENST00000452776 H7BZZ5 65 aa6.15□□□□□ -1.42
SMCO1-202ENST00000452776 OPRPNQ99935 248 aaPredicted RBP6.15□□□□□ -1.42
SMCO1-202ENST00000452776 KRTAP4-12Q9BQ66 201 aa6.15□□□□□ -1.42
SMCO1-202ENST00000452776 IGHV3-23P01764 117 aa6.15□□□□□ -1.43
SMCO1-202ENST00000452776 COX7A1P24310 79 aa6.15□□□□□ -1.43
SMCO1-202ENST00000452776 C15orf32Q32M92 178 aa6.15□□□□□ -1.43
SMCO1-202ENST00000452776 LAMA2P24043 3122 aaKnown RBP6.15□□□□□ -1.43
SMCO1-202ENST00000452776 MUC3AQ02505 3323 aa6.14□□□□□ -1.43
SMCO1-202ENST00000452776 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.14□□□□□ -1.43
SMCO1-202ENST00000452776 TRBV12-3P01733 135 aa6.14□□□□□ -1.43
SMCO1-202ENST00000452776 FAM223AQ8IWN6 122 aa6.14□□□□□ -1.43
SMCO1-202ENST00000452776 UBL5Q9BZL1 73 aa6.14□□□□□ -1.43
SMCO1-202ENST00000452776 A0A087WVE0 104 aa6.13□□□□□ -1.43
SMCO1-202ENST00000452776 A0A087WWL8 130 aa6.13□□□□□ -1.43
SMCO1-202ENST00000452776 KLLNB2CW77 178 aa6.13□□□□□ -1.43
SMCO1-202ENST00000452776 CFHR3Q02985 330 aa6.13□□□□□ -1.43
SMCO1-202ENST00000452776 Q8N2B8 174 aa6.13□□□□□ -1.43
SMCO1-202ENST00000452776 BRK1Q8WUW1 75 aa6.13□□□□□ -1.43
SMCO1-202ENST00000452776 ARFGEF3Q5TH69 2177 aa6.13□□□□□ -1.43
SMCO1-202ENST00000452776 KRTAP4-8A0A0G2JLE6 195 aa6.13□□□□□ -1.43
SMCO1-202ENST00000452776 CRPP02741 224 aa6.13□□□□□ -1.43
SMCO1-202ENST00000452776 C1orf158Q8N1D5 194 aa6.13□□□□□ -1.43
SMCO1-202ENST00000452776 KRTAP9-9Q9BYP9 154 aa6.13□□□□□ -1.43
SMCO1-202ENST00000452776 KRTAP9-4Q9BYQ2 154 aa6.13□□□□□ -1.43
SMCO1-202ENST00000452776 C14orf132Q9NPU4 83 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms